Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03] 29,751 sequences; 2,566,742,836 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq14353 105 6e-18 seq15394 102 7e-17 seq13178 98.7 8e-16 seq6889 89.7 4e-13 seq2827 89.7 4e-13 seq481 87.8 2e-12 seq10219 86.0 5e-12 seq12924 84.2 2e-11 seq5610 82.4 6e-11 >seq14353 Length=57137 Score = 105 bits (116), Expect = 6e-18 Identities = 152/211 (72%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT--CGTCCT 48575 || ||||| || || |||||||||||||||||| || || || |||| || | |||| Sbjct 32817 ACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGC-AAGTGTC-CTGCCATCCT 32760 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | ||||||||||| || |||| || | ||| || || || | || |||||||||| Sbjct 32759 CAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTTGTCCT 32700 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||||| ||||| | | || || |||| ||| || | || ||||||| Sbjct 32699 GGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACTTCCAAGGTGATGGTTT 32640 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| ||||| ||||||||||||||||| Sbjct 32639 TCCCGGTAAGAGTCTTCACAAAAATCTGCAT 32609 >seq15394 Length=389208 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 |||||| || |||||| |||||| || ||||||||||||||||| || | ||||| Sbjct 121394 CACTAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCCAACGTGCGGCCATCCTC 121335 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || |||||||| || | || || | ||||| || || | | |||||||||| Sbjct 121334 AAGTTGCTTACCAGCGAAGATCAACCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTG 121275 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || ||| | | | || ||||| | | |||| ||| | ||| ||||| || Sbjct 121274 AATCTTGGCCTTTACATTGTCAATAGTATCAGAACTCTCCACCTCCAATGTGATGGTCTT 121215 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 |||||||| || || || ||||| |||||| Sbjct 121214 TCCGGTGAGGGTCTTGACGAAAATTTGCATC 121184 >seq13178 Length=14983 Score = 98.7 bits (108), Expect = 8e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| ||||| || ||||||| ||||| || ||| || | Sbjct 11481 TCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 11422 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | ||||||||| |||||| ||| | | Sbjct 11421 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTTACATTA 11362 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | ||| ||||| || ||||| || ||||| || ||||| || Sbjct 11361 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 11302 Query 48716 AAAATCTGCATCGT 48729 || ||||||||||| Sbjct 11301 AAGATCTGCATCGT 11288 >seq6889 Length=136205 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || ||||||||||| ||||| || ||||||| ||||| || ||| || | Sbjct 105703 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 105644 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | ||||||||| |||||| ||| | | Sbjct 105643 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTG 105584 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | ||| ||||| || ||||| || ||||| || ||||| || Sbjct 105583 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 105524 Query 48716 AAAATCTGCATC 48727 || ||||||||| Sbjct 105523 AAGATCTGCATC 105512 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | ||| || || | ||||| || ||||| || ||||| ||||||||| Sbjct 106423 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCAGCC 106364 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || | | | ||||| |||||||| || | | || ||||| || || || ||| Sbjct 106363 AAGGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGGCGGG 106304 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||||||| ||| ||| ||| | | | ||||| || | | |||| | Sbjct 106303 ATCCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATGGTGTCCGAACTCTCCACC 106244 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || ||||| || ||||| | |||||||| || |||||||| Sbjct 106243 TCCAAGGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 106197 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || ||||||||||| ||||| || ||||||| ||||| || ||| || | Sbjct 105931 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 105872 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | ||||||||| |||||| ||| | | Sbjct 105871 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTA 105812 Query 48656 GCTATGGTATCGGTAGACTC-CGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | ||||| |||| || ||| || | |||| || ||||| || ||||| | ||||| | Sbjct 105811 TCGATGGTGTCGG-AG-CTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGA 105754 Query 48714 CAAAAATCTGCAT 48726 | || |||||||| Sbjct 105753 CGAAGATCTGCAT 105741 >seq2827 Length=281962 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || ||||||||||| ||||| || ||||||| ||||| || ||| || | Sbjct 48993 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 49052 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | ||||||||| |||||| ||| | | Sbjct 49053 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTG 49112 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | ||| ||||| || ||||| || ||||| || ||||| || Sbjct 49113 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 49172 Query 48716 AAAATCTGCATC 48727 || ||||||||| Sbjct 49173 AAGATCTGCATC 49184 >seq481 Length=542854 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/211 (71%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT--CGTCCT 48575 || ||||| || || ||||||| ||||||||| || || || |||| || | | || Sbjct 216225 ACCAAATGGAGGGTCGATTCCTTTT-AATGTTGTAGTCTGC-AAGTGTC-CTGCCATTCT 216169 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | ||||||||||| || |||| || | ||| || || || | || |||||||||| Sbjct 216168 CAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTTGTCCT 216109 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||||| ||||| | | || || |||| ||| || | || ||||||| Sbjct 216108 GGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACTTCCAAGGTGATGGTTT 216049 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| ||||| ||||||||||||||||| Sbjct 216048 TCCCGGTAAGAGTCTTCACAAAAATCTGCAT 216018 >seq10219 Length=308859 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 30066 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30008 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 30007 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 29948 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 29947 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 29888 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 29887 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 29839 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 30294 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30236 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 30235 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30176 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 30175 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30116 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 30115 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30067 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 30522 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30464 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 30463 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30404 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 30403 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30344 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 30343 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30295 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 30750 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30692 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 30691 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30632 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 30631 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30572 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 30571 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30523 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 30978 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30920 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 30919 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30860 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 30859 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30800 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 30799 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30751 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 31206 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 31148 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 31147 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31088 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 31087 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31028 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 31027 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30979 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 31434 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 31376 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 31375 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31316 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 31315 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31256 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 31255 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 31207 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 31662 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 31604 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 31603 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31544 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 31543 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31484 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 31483 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 31435 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 31890 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 31832 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 31831 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31772 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 31771 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31712 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 31711 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 31663 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 32118 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 32060 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 32059 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32000 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 31999 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31940 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 31939 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 31891 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 32346 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 32288 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 32287 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32228 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 32227 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 32168 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 32167 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 32119 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 32574 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 32516 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 32515 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32456 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 32455 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 32396 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 32395 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 32347 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || |||||||| ||||| || || || Sbjct 32802 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 32744 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 32743 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32684 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 32683 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 32624 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 32623 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 32575 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573 |||||| ||||| || || ||||| |||||||| || || || | ||| | || Sbjct 29596 TAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCAAGAGTTCGGCCATC 29537 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 || |||||||| || | |||| || | |||||| ||| || | | |||||| || Sbjct 29536 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATC 29477 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | ||| || ||| | | | || ||||| | | |||| ||| | || || || Sbjct 29476 CTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGT 29417 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| || ||||| ||||| ||||||||||||||| Sbjct 29416 TTTTCCAGTGAGGGTTTTTACAAAAATCTGCATC 29383 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTC 48573 || || ||||| || ||| |||||||||||||| || || | ||| ||| | | | || Sbjct 23448 AAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCG-CAAGTGTCCTCCCATC 23390 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 ||| |||||||| ||| | |||| || | |||||| || || | | |||||||| Sbjct 23389 CTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC 23330 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | ||||||| || | | | ||||| || | ||| ||| | || ||||| Sbjct 23329 CTGAATTTTCGCTTTAACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAGGGTGATGGT 23270 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 |||||| || | || || ||||| ||||||||| Sbjct 23269 TTTACCAGTCAAGGTCTTAACAAATATCTGCATC 23236 >seq12924 Length=310248 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573 |||||| ||||| || || ||||| |||||||| || || || | ||| | || Sbjct 73837 TAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCAAGAGTTCGGCCATC 73778 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 || |||||||| || | |||| || | |||||| ||| || | | |||||| || Sbjct 73777 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATC 73718 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | ||| || ||| | | | || ||||| | | |||| ||| | || || || Sbjct 73717 CTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGT 73658 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| || ||||| ||||| ||||||||||||||| Sbjct 73657 TTTTCCAGTGAGGGTTTTTACAAAAATCTGCATC 73624 >seq5610 Length=141783 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTC-GCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 || || || ||||| ||||| || || ||| | |||| || ||||| || || || | Sbjct 62167 TCTTTCTGGATGTTATAATCGGC-AAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAA 62109 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 ||| | ||||||||| || || | | ||||||||| || || ||||| | Sbjct 62108 AATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 62049 Query 48653 GACGCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTT 48711 | || ||||| |||| || | || | |||| ||||||||| || ||||| || ||||| Sbjct 62048 GTCG--ATGGTGTCGG-AGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTT 61992 Query 48712 CACAAAAATCTGCATC 48727 |||||| ||||||||| Sbjct 61991 CACAAAGATCTGCATC 61976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421098458395751