Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq14353 105 6e-18
seq15394 102 7e-17
seq13178 98.7 8e-16
seq6889 89.7 4e-13
seq2827 89.7 4e-13
seq481 87.8 2e-12
seq10219 86.0 5e-12
seq12924 84.2 2e-11
seq5610 82.4 6e-11
>seq14353
Length=57137
Score = 105 bits (116), Expect = 6e-18
Identities = 152/211 (72%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT--CGTCCT 48575
|| ||||| || || |||||||||||||||||| || || || |||| || | ||||
Sbjct 32817 ACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGC-AAGTGTC-CTGCCATCCT 32760
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| ||||||||||| || |||| || | ||| || || || | || ||||||||||
Sbjct 32759 CAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTTGTCCT 32700
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||||| ||||| | | || || |||| ||| || | || |||||||
Sbjct 32699 GGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACTTCCAAGGTGATGGTTT 32640
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| ||||| ||||| |||||||||||||||||
Sbjct 32639 TCCCGGTAAGAGTCTTCACAAAAATCTGCAT 32609
>seq15394
Length=389208
Score = 102 bits (112), Expect = 7e-17
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
|||||| || |||||| |||||| || ||||||||||||||||| || | |||||
Sbjct 121394 CACTAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCCAACGTGCGGCCATCCTC 121335
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
|| |||||||| || | || || | ||||| || || | | ||||||||||
Sbjct 121334 AAGTTGCTTACCAGCGAAGATCAACCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTG 121275
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
||| || ||| | | | || ||||| | | |||| ||| | ||| ||||| ||
Sbjct 121274 AATCTTGGCCTTTACATTGTCAATAGTATCAGAACTCTCCACCTCCAATGTGATGGTCTT 121215
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
|||||||| || || || ||||| ||||||
Sbjct 121214 TCCGGTGAGGGTCTTGACGAAAATTTGCATC 121184
>seq13178
Length=14983
Score = 98.7 bits (108), Expect = 8e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| |||||||||||||| ||||| || ||||||| ||||| || ||| || |
Sbjct 11481 TCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 11422
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | ||||||||| || || | | ||||||||| |||||| ||| | |
Sbjct 11421 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTTACATTA 11362
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | | ||| ||||| || ||||| || ||||| || ||||| ||
Sbjct 11361 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 11302
Query 48716 AAAATCTGCATCGT 48729
|| |||||||||||
Sbjct 11301 AAGATCTGCATCGT 11288
>seq6889
Length=136205
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| || ||||||||||| ||||| || ||||||| ||||| || ||| || |
Sbjct 105703 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 105644
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | ||||||||| || || | | ||||||||| |||||| ||| | |
Sbjct 105643 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTG 105584
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | | ||| ||||| || ||||| || ||||| || ||||| ||
Sbjct 105583 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 105524
Query 48716 AAAATCTGCATC 48727
|| |||||||||
Sbjct 105523 AAGATCTGCATC 105512
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | ||| || || | ||||| || ||||| || ||||| |||||||||
Sbjct 106423 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCAGCC 106364
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
|| | | | ||||| |||||||| || | | || ||||| || || || |||
Sbjct 106363 AAGGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGGCGGG 106304
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| | |||||||||| ||| ||| ||| | | | ||||| || | | |||| |
Sbjct 106303 ATCCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATGGTGTCCGAACTCTCCACC 106244
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| | || ||||| || ||||| | |||||||| || ||||||||
Sbjct 106243 TCCAAGGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 106197
Score = 82.4 bits (90), Expect = 6e-11
Identities = 137/193 (71%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| || ||||||||||| ||||| || ||||||| ||||| || ||| || |
Sbjct 105931 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 105872
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | ||||||||| || || | | ||||||||| |||||| ||| | |
Sbjct 105871 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTA 105812
Query 48656 GCTATGGTATCGGTAGACTC-CGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713
| ||||| |||| || ||| || | |||| || ||||| || ||||| | ||||| |
Sbjct 105811 TCGATGGTGTCGG-AG-CTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGA 105754
Query 48714 CAAAAATCTGCAT 48726
| || ||||||||
Sbjct 105753 CGAAGATCTGCAT 105741
>seq2827
Length=281962
Score = 89.7 bits (98), Expect = 4e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595
||||| || ||||||||||| ||||| || ||||||| ||||| || ||| || |
Sbjct 48993 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 49052
Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655
|| | ||||||||| || || | | ||||||||| |||||| ||| | |
Sbjct 49053 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTG 49112
Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715
| ||||| || | | ||| ||||| || ||||| || ||||| || ||||| ||
Sbjct 49113 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 49172
Query 48716 AAAATCTGCATC 48727
|| |||||||||
Sbjct 49173 AAGATCTGCATC 49184
>seq481
Length=542854
Score = 87.8 bits (96), Expect = 2e-12
Identities = 149/211 (71%), Gaps = 5/211 (2%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT--CGTCCT 48575
|| ||||| || || ||||||| ||||||||| || || || |||| || | | ||
Sbjct 216225 ACCAAATGGAGGGTCGATTCCTTTT-AATGTTGTAGTCTGC-AAGTGTC-CTGCCATTCT 216169
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| ||||||||||| || |||| || | ||| || || || | || ||||||||||
Sbjct 216168 CAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTTGTCCT 216109
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||||| ||||| | | || || |||| ||| || | || |||||||
Sbjct 216108 GGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACTTCCAAGGTGATGGTTT 216049
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| ||||| ||||| |||||||||||||||||
Sbjct 216048 TCCCGGTAAGAGTCTTCACAAAAATCTGCAT 216018
>seq10219
Length=308859
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 30066 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30008
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 30007 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 29948
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 29947 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 29888
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 29887 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 29839
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 30294 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30236
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 30235 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30176
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 30175 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30116
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 30115 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30067
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 30522 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30464
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 30463 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30404
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 30403 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30344
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 30343 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30295
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 30750 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30692
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 30691 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30632
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 30631 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30572
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 30571 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30523
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 30978 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 30920
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 30919 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 30860
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 30859 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 30800
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 30799 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30751
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 31206 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 31148
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 31147 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31088
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 31087 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31028
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 31027 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 30979
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 31434 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 31376
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 31375 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31316
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 31315 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31256
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 31255 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 31207
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 31662 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 31604
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 31603 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31544
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 31543 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31484
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 31483 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 31435
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 31890 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 31832
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 31831 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 31772
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 31771 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31712
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 31711 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 31663
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 32118 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 32060
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 32059 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32000
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 31999 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 31940
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 31939 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 31891
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 32346 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 32288
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 32287 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32228
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 32227 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 32168
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 32167 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 32119
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 32574 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 32516
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 32515 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32456
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 32455 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 32396
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 32395 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 32347
Score = 86.0 bits (94), Expect = 5e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
||||| || | | ||| || ||||| || || |||||||| ||||| || || ||
Sbjct 32802 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 32744
Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| |||| | | ||||| |||||||| ||| | |||| || | |||||| || ||
Sbjct 32743 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 32684
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||||||| |||| | | ||||| || | |||
Sbjct 32683 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 32624
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || |||||||||||||| | || ||||| || |||||||||
Sbjct 32623 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 32575
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573
|||||| ||||| || || ||||| |||||||| || || || | ||| | ||
Sbjct 29596 TAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCAAGAGTTCGGCCATC 29537
Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633
|| |||||||| || | |||| || | |||||| ||| || | | |||||| ||
Sbjct 29536 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATC 29477
Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
| ||| || ||| | | | || ||||| | | |||| ||| | || || ||
Sbjct 29476 CTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGT 29417
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| || ||||| ||||| |||||||||||||||
Sbjct 29416 TTTTCCAGTGAGGGTTTTTACAAAAATCTGCATC 29383
Score = 82.4 bits (90), Expect = 6e-11
Identities = 148/214 (69%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTC 48573
|| || ||||| || ||| |||||||||||||| || || | ||| ||| | | | ||
Sbjct 23448 AAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCG-CAAGTGTCCTCCCATC 23390
Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633
||| |||||||| ||| | |||| || | |||||| || || | | ||||||||
Sbjct 23389 CTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC 23330
Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
| ||||||| || | | | ||||| || | ||| ||| | || |||||
Sbjct 23329 CTGAATTTTCGCTTTAACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAGGGTGATGGT 23270
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
|||||| || | || || ||||| |||||||||
Sbjct 23269 TTTACCAGTCAAGGTCTTAACAAATATCTGCATC 23236
>seq12924
Length=310248
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/214 (69%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573
|||||| ||||| || || ||||| |||||||| || || || | ||| | ||
Sbjct 73837 TAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCAAGAGTTCGGCCATC 73778
Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633
|| |||||||| || | |||| || | |||||| ||| || | | |||||| ||
Sbjct 73777 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATC 73718
Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
| ||| || ||| | | | || ||||| | | |||| ||| | || || ||
Sbjct 73717 CTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGT 73658
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| || ||||| ||||| |||||||||||||||
Sbjct 73657 TTTTCCAGTGAGGGTTTTTACAAAAATCTGCATC 73624
>seq5610
Length=141783
Score = 82.4 bits (90), Expect = 6e-11
Identities = 140/196 (71%), Gaps = 8/196 (4%)
Strand=Plus/Minus
Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTC-GCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|| || || ||||| ||||| || || ||| | |||| || ||||| || || || |
Sbjct 62167 TCTTTCTGGATGTTATAATCGGC-AAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAA 62109
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652
||| | ||||||||| || || | | ||||||||| || || ||||| |
Sbjct 62108 AATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 62049
Query 48653 GACGCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTT 48711
| || ||||| |||| || | || | |||| ||||||||| || ||||| || |||||
Sbjct 62048 GTCG--ATGGTGTCGG-AGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTT 61992
Query 48712 CACAAAAATCTGCATC 48727
|||||| |||||||||
Sbjct 61991 CACAAAGATCTGCATC 61976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421098458395751
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |