Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03] 29,751 sequences; 2,566,742,836 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq13754 172 9e-39 seq27244 167 4e-37 seq23515 149 1e-31 seq13358 147 3e-31 seq15783 143 4e-30 seq10428 143 4e-30 seq28001 141 1e-29 seq11408 141 1e-29 seq17717 140 5e-29 seq24624 138 2e-28 seq12277 136 6e-28 seq10795 132 8e-27 seq24491 129 9e-26 seq11364 129 9e-26 seq2557 125 1e-24 >seq13754 Length=97556 Score = 172 bits (190), Expect = 9e-39 Identities = 182/240 (76%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 ||||||||||||||||| || ||||| || ||||||||| ||||||||||||| ||||| Sbjct 826 GATAACATCCAAGGAATTACTAAGCCGGCCATCCGTCGTTTGGCTCGTCGTGGAGGAGTT 885 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||| | || ||| ||| |||||||||| | | | || |||||||| ||| | || Sbjct 886 AAGAGAATCAGTGGCTTGATCTATGAAGAAACCAGAGGAGTATTGAAGATTTTCTTGGAG 945 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | ||||| | || || |||||||| | | | ||||| || || || Sbjct 946 AACGTCATTCGCGATGCAGTGACTTACACTGAGCACGCCAGAAGGAAGACCGTGACGGCC 1005 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| |||||||| |||||||||| | ||||| |||||| ||||| Sbjct 1006 ATGGATGTTGTTTATGCTTTGAAACGGCAAGGCCGTACTCTCTATGGATTTGGAGGTTAA 1065 >seq27244 Length=113513 Score = 167 bits (184), Expect = 4e-37 Identities = 181/240 (75%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 |||||||||||||| ||||| ||||| || ||||||||| ||||||||||||| ||||| Sbjct 15047 GATAACATCCAAGGTATCACTAAGCCGGCCATCCGTCGTTTGGCTCGTCGTGGAGGAGTT 15106 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||| | || ||| ||| |||||||||| | | | || |||||||| ||| | || Sbjct 15107 AAGAGAATCAGTGGCTTGATCTATGAAGAAACCAGAGGAGTGTTGAAGATTTTCTTGGAG 15166 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | ||||| | || || |||||||||| | | ||||| || || || Sbjct 15167 AACGTCATTCGCGATGCAGTGACTTACACTGAGCACGCTAGAAGGAAGACCGTGACGGCC 15226 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| |||||| | |||||||||| | ||||| ||||| ||||| Sbjct 15227 ATGGATGTTGTTTATGCTTTGAAAAGGCAAGGCCGTACTCTCTATGGATTTGGTGGTTAA 15286 >seq23515 Length=4648 Score = 149 bits (164), Expect = 1e-31 Identities = 178/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| |||||||| || || || ||||| || || || ||| |||||||||| || || | Sbjct 3092 GAGACAACATCCAGGGCATTACTAAGCCTGCCATTCGCCGTTTGGCTCGTCGAGGAGGTG 3033 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 ||||| | || ||| ||| |||||||||| | | | | || |||||||| ||| | Sbjct 3032 TCAAGAGGATCAGTGGCTTGATCTATGAAGAAACTAGGGGAGTATTGAAGATTTTCTTGG 2973 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || || | ||||||| | |||||||||||||| | | ||||| || ||| Sbjct 2972 AGAATGTGATTCGTGATGCTGTGACTTATACCGAGCACGCCAGGAGGAAGACCGTTACCG 2913 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 |||||||| | || ||||| |||||| | || ||| | | | ||||||||||| ||| Sbjct 2912 CCATGGATGTTGTTTATGCCTTGAAAAGGCAGGGCAGGACTCTCTATGGTTTTGGTGGTT 2853 Query 16698 AA 16699 || Sbjct 2852 AA 2851 >seq13358 Length=87340 Score = 147 bits (162), Expect = 3e-31 Identities = 195/268 (73%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | | || || || ||||| ||||| ||||| || ||||| ||||| Sbjct 60130 GCGAAGCGTCACCGTAAGGTC-CTCCGTGATAATATCCAGGGAATTACGAAGCCGGCTAT 60188 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||| |||||||| | || || ||||||||| || || ||| |||| ||||| | Sbjct 60189 TCGGCGTTTGGCTCGTAGGGGAGGCGTCAAGCGTATCAGCGGCTTGATCTACGAAGAAAC 60248 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | ||||||||||| ||| ||| || | ||| ||| || ||| || || Sbjct 60249 CCGTGGTGTTCTTAAGATCTTCCTGGAGAACGTGATTCGTGACGCTGTCACCTACACAGA 60308 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| | | |||||||| || | |||||| | || |||||| | || | || || Sbjct 60309 GCACGCGAGGAGAAAGACTGTGACTGCTATGGATGTGGTTTATGCACTCAAGAGGCAGGG 60368 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | | ||||| || || ||||| Sbjct 60369 CAGGACTTTGTATGGATTCGGTGGTTAA 60396 >seq15783 Length=641405 Score = 143 bits (158), Expect = 4e-30 Identities = 194/268 (72%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | | || || || ||||| ||||| ||||| || ||||| ||||| Sbjct 432100 GCAAAGCGTCACCGTAAGGTC-CTCCGTGATAATATCCAGGGAATTACAAAGCCGGCTAT 432158 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||| |||||||| | || || |||||||| || || ||| |||| ||||| | Sbjct 432159 TCGGCGTTTGGCTCGTAGGGGAGGCGTCAAGCGCATCAGCGGCTTGATCTACGAAGAAAC 432218 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | ||||||||| | ||| ||| || | ||| ||| || ||||||||| Sbjct 432219 CCGTGGTGTTCTCAAGATCTTCTTGGAGAACGTGATTCGTGACGCTGTCACCTATACCGA 432278 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| | | |||||||| || | |||||| | || ||||| | || | || || Sbjct 432279 GCACGCGAGGAGAAAGACTGTGACTGCTATGGATGTGGTTTATGCGCTCAAGAGGCAGGG 432338 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | | ||||| || || ||||| Sbjct 432339 CAGGACTTTGTATGGATTCGGTGGTTAA 432366 >seq10428 Length=411614 Score = 143 bits (158), Expect = 4e-30 Identities = 195/272 (72%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||| | ||||| | ||| ||||||||||| || || ||||||||||| || || Sbjct 210745 CGCTAAGAGGCATCGTAAGGTTCTCCGAGATAACATTCAGGGCATCACCAAGCCGGCGAT 210686 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || | | |||||| | || || || ||| | | ||| ||| |||| || || | Sbjct 210685 TCGGAGATTAGCTCGTAGAGGCGGCGTGAAGAGGATTAGTGGTTTGATCTACGAGGAAAC 210626 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| | ||||||||||| | | |||||| | ||||| || |||||| || Sbjct 210625 TCGTGGGGTTCTCAAGATCTTCCTTGAAAACGTTATACGCGATGCCGTCACCTATACGGA 210566 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| ||||||||||| ||| | |||||| |||| ||||| | || | ||||| Sbjct 210565 GCACGCTAGGCGTAAGACTGTTACCGCTATGGATGTCGTTTATGCTCTCAAGAGACAAGG 210506 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 | | |||| ||||| || ||| || || Sbjct 210505 AAGGACTCTTTACGGTTTCGGCGGTTGATTTT 210474 >seq28001 Length=40568 Score = 141 bits (156), Expect = 1e-29 Identities = 168/225 (75%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || ||||||||||| |||||||| || || || || Sbjct 8835 GCGAAGCGCCACCGCAAGGTC-CTCCGTGATAACATCCAGGGAATCACGAAACCGGCGAT 8777 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||| | || || ||||||||| || ||| ||| |||| || || | Sbjct 8776 CCGGCGTCTAGCTCGTAGGGGAGGTGTCAAGCGTATCAGTGGCTTGATCTACGAGGAAAC 8717 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||||||||||| | ||| ||| |||| || || | ||| || || Sbjct 8716 CCGTGGAGTGTTGAAGATCTTCTTGGAGAACGTGATCCGCGACGCCGTGACCTACACTGA 8657 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| | | ||||| || ||| |||||||| |||| ||||| Sbjct 8656 GCACGCCAGGAGAAAGACGGTGACCGCCATGGATGTCGTTTATGC 8612 Score = 141 bits (156), Expect = 1e-29 Identities = 168/225 (75%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || ||||||||||| |||||||| || || || || Sbjct 10886 GCAAAGCGCCACCGCAAGGTC-CTCCGTGATAACATCCAGGGAATCACGAAACCGGCGAT 10828 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||| | || || ||||||||| || ||| ||| |||| || || | Sbjct 10827 CCGGCGTCTAGCTCGTAGGGGAGGTGTCAAGCGTATCAGTGGCTTGATCTACGAGGAAAC 10768 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||||||||||| | ||| ||| |||| || || | ||| || || Sbjct 10767 CCGTGGAGTGTTGAAGATCTTCTTGGAGAACGTGATCCGCGACGCCGTGACCTACACTGA 10708 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| | | ||||| || ||| |||||||| |||| ||||| Sbjct 10707 GCACGCCAGGAGAAAGACGGTGACCGCCATGGATGTCGTTTATGC 10663 >seq11408 Length=110274 Score = 141 bits (156), Expect = 1e-29 Identities = 182/251 (73%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| ||||||||||| || || ||||||||||| || || || | | |||||| | || Sbjct 34794 TCTCCGAGATAACATTCAGGGCATCACCAAGCCGGCGATTCGGAGATTAGCTCGTAGAGG 34735 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || ||| | | ||| ||| |||| || || | ||||| |||| | |||||||| Sbjct 34734 CGGCGTGAAGAGGATTAGTGGCTTGATCTACGAGGAAACTCGTGGTGTTCTCAAGATCTT 34675 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | |||||| | |||||| | |||||| |||||||||| ||||||||||| Sbjct 34674 CCTTGAAAACGTTATACGTGATGCCGTAACCTATACGGAGCACGCTAGGCGTAAGACTGT 34615 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| | |||||| |||| ||||| | || | ||||| | | |||| ||||| || Sbjct 34614 TACCGCTATGGATGTCGTTTATGCTCTCAAGAGACAAGGAAGGACTCTTTACGGTTTCGG 34555 Query 16693 AAGTTAATCTT 16703 ||| || || Sbjct 34554 TGGTTGATTTT 34544 >seq17717 Length=431858 Score = 140 bits (154), Expect = 5e-29 Identities = 176/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||| || || || || ||||| || || || ||| |||||||||| || || | Sbjct 204700 GAGACAACATTCAGGGCATTACTAAGCCTGCCATTCGCCGTTTGGCTCGTCGAGGAGGTG 204759 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 ||||| | || ||| ||| |||||||||| | | | || |||||||| ||| | Sbjct 204760 TCAAGAGGATCAGTGGCTTGATCTATGAAGAAACCAGAGGAGTATTGAAGATTTTCTTGG 204819 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || || | ||||||| | |||||||||||||| | | ||||| || ||| Sbjct 204820 AGAATGTGATTCGTGATGCTGTGACTTATACCGAGCACGCCAGGAGGAAGACCGTTACCG 204879 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || ||||| |||||| | || ||| | | | |||||||||||| ||| Sbjct 204880 CTATGGATGTTGTTTATGCCTTGAAAAGGCAGGGCAGGACTCTCTATGGTTTTGGAGGTT 204939 Query 16698 AA 16699 || Sbjct 204940 AA 204941 >seq24624 Length=84337 Score = 138 bits (152), Expect = 2e-28 Identities = 167/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || ||||||||||| |||||||| || || || || Sbjct 41749 GCGAAGCGCCACCGCAAGGTC-CTCCGTGATAACATCCAGGGAATCACGAAACCGGCGAT 41807 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||| | || || || |||||| || ||| ||| |||| || || | Sbjct 41808 CCGGCGTCTAGCTCGTAGGGGAGGTGTTAAGCGTATCAGTGGCTTGATCTACGAGGAAAC 41867 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||||||||||| | ||| ||| |||| || || | ||| || || Sbjct 41868 CCGTGGAGTGTTGAAGATCTTCTTGGAGAACGTGATCCGCGACGCCGTGACCTACACTGA 41927 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| | | ||||| || ||| |||||||| |||| ||||| Sbjct 41928 GCACGCCAGGAGAAAGACGGTGACCGCCATGGATGTCGTTTATGC 41972 Score = 138 bits (152), Expect = 2e-28 Identities = 167/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || ||||||||||| |||||||| || || || || Sbjct 47043 GCGAAGCGCCACCGCAAGGTC-CTCCGTGATAACATCCAGGGAATCACGAAACCGGCGAT 47101 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||| | || || || |||||| || ||| ||| |||| || || | Sbjct 47102 CCGGCGTCTAGCTCGTAGGGGAGGTGTTAAGCGTATCAGTGGCTTGATCTACGAGGAAAC 47161 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||||||||||| | ||| ||| |||| || || | ||| || || Sbjct 47162 CCGTGGAGTGTTGAAGATCTTCTTGGAGAACGTGATCCGCGACGCCGTGACCTACACTGA 47221 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| | | ||||| || ||| |||||||| |||| ||||| Sbjct 47222 GCACGCCAGGAGAAAGACGGTGACCGCCATGGATGTCGTTTATGC 47266 >seq12277 Length=503836 Score = 136 bits (150), Expect = 6e-28 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || ||||| || || || |||||||| || || || ||| |||||||| | || || || Sbjct 138481 GACAACATTCAGGGCATTACCAAGCCTGCGATTCGCCGTTTGGCTCGTAGGGGAGGTGTG 138540 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||| | | || ||| |||| ||||| | || | || |||||||||||| | || Sbjct 138541 AAGAGAATTAGCGGTTTGATCTACGAAGAAACCCGAGGCGTATTGAAGATCTTCTTGGAG 138600 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | |||||| | || || |||||||| | | | |||||||| ||| || Sbjct 138601 AACGTGATTCGTGATGCAGTGACATACACTGAGCACGCCAGAAGGAAGACTGTTACCGCC 138660 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| |||||| | |||||| | | | |||||||||||| ||||| Sbjct 138661 ATGGATGTTGTTTATGCCTTGAAAAGGCAAGGCAGGACTCTCTATGGTTTTGGAGGTTAA 138720 Score = 105 bits (116), Expect = 1e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 16532 GGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCAT 16591 || ||| |||| ||||| | || | || |||||||||||| | ||| ||| || | | Sbjct 140023 GGTTTGATCTACGAAGAAACCCGAGGCGTATTGAAGATCTTCTTGGAGAACGTGATTCGT 140082 Query 16592 GATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTC 16651 ||||| | || || |||||||| | | | |||||||| ||| |||||||| | || Sbjct 140083 GATGCAGTGACATACACTGAGCACGCCAGAAGGAAGACTGTTACCGCCATGGATGTTGTT 140142 Query 16652 TATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| |||||| | |||||| | | | |||||||||||| ||||| Sbjct 140143 TATGCCTTGAAAAGGCAAGGCAGGACTCTCTATGGTTTTGGAGGTTAA 140190 >seq10795 Length=578451 Score = 132 bits (146), Expect = 8e-27 Identities = 190/268 (71%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||| | ||||| | | ||| ||||||||||| ||||| ||||| ||||| || || Sbjct 154860 GCTAAGAGGCATCGGAAAGTTCTCCGAGATAACATTCAAGGCATCACTAAGCCGGCGATT 154919 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||| | | |||||| | || || || ||| | || ||| || |||| || || | | Sbjct 154920 CGTAGGTTAGCTCGTAGAGGCGGTGTGAAGAGGATCAGTGGCCTGATCTACGAGGAAACT 154979 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | |||||||| || | | |||||| | |||||| | |||||| || Sbjct 154980 CGTGGAGTTCTCAAGATCTTTCTGGAAAACGTTATACGCGATGCTGTTACCTATACGGAA 155039 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||||| ||||| ||||| ||| | ||||| | || ||||| | || | ||||| Sbjct 155040 CACGCTAGGCGTAAAACTGTTACCGCTATGGACGTTGTTTATGCTCTCAAGAGACAAGGA 155099 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAAT 16700 | | |||||||||| || ||| || Sbjct 155100 AGGACTCTTTATGGTTTCGGTGGTTGAT 155127 >seq24491 Length=144039 Score = 129 bits (142), Expect = 9e-26 Identities = 175/244 (72%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || ||||| || || || |||||||| || || || ||| |||||||| | || || || Sbjct 81844 GACAACATTCAGGGCATTACCAAGCCTGCGATTCGCCGTTTGGCTCGTAGGGGAGGTGTG 81903 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 || | || || ||| |||| ||||| | || | || |||||||||||| | || Sbjct 81904 AAAAGAATCAGCGGTTTGATCTACGAAGAAACCCGAGGCGTATTGAAGATCTTCTTGGAG 81963 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | |||||| | || || || ||||| | | | ||||| || ||| || Sbjct 81964 AACGTGATTCGTGATGCCGTGACATACACTGAACACGCCAGAAGGAAGACCGTTACCGCC 82023 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| |||||| | |||||| | | | |||||||||||| ||||| Sbjct 82024 ATGGATGTTGTTTATGCCTTGAAAAGGCAAGGCAGGACTCTCTATGGTTTTGGAGGTTAA 82083 Query 16700 TCTT 16703 ||| Sbjct 82084 GCTT 82087 >seq11364 Length=124287 Score = 129 bits (142), Expect = 9e-26 Identities = 188/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||| | ||| || ||||| ||||| || ||||| ||||| || || Sbjct 14839 GCAAAGCGCCATCGTAAGGTTCTCCGTGATAATATCCAGGGTATCACAAAGCCGGCAATT 14898 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||||||| | || || ||||||||| || || | |||| || || | Sbjct 14899 CGGCGTTTGGCTCGTAGAGGAGGCGTCAAGCGTATCAGCGGTCTAATCTACGAGGAAACC 14958 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||||||||||||||| | ||| ||| || | |||||| | ||| ||||| Sbjct 14959 CGTGGGGTTTTGAAGATCTTCTTGGAGAACGTGATTCGTGATGCAGTAACCTACACCGAA 15018 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || | | |||||||| || | |||||| | || |||||| |||| | || ||| Sbjct 15019 CATGCGAGGAGGAAGACTGTGACTGCTATGGATGTGGTTTATGCACTGAAGAGGCAGGGC 15078 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | ||||| ||||| |||| Sbjct 15079 AGGACATTGTATGGGTTTGGTGGTTA 15104 >seq2557 Length=469415 Score = 125 bits (138), Expect = 1e-24 Identities = 188/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || Sbjct 381544 GCAAAGCGCCATCGTAAGGTTCTCCGTGATAATATCCAGGGTATCACAAAACCGGCAATT 381485 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||||||| | || || ||||| ||| || || || |||| || || | Sbjct 381484 CGGCGTTTGGCTCGTAGAGGAGGCGTCAAACGTATCAGCGGTTTAATCTACGAGGAAACC 381425 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||||||||||||||| | ||| ||| || | |||||| | ||| ||||| Sbjct 381424 CGTGGGGTTTTGAAGATCTTCTTGGAGAACGTGATTCGTGATGCAGTAACCTACACCGAA 381365 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || | | |||||||| || | |||||| | || |||||| |||| | || ||| Sbjct 381364 CATGCGAGGAGGAAGACTGTGACTGCTATGGATGTGGTTTATGCACTGAAGAGGCAGGGC 381305 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | ||||| ||||| ||||| Sbjct 381304 AGGACTTTGTATGGGTTTGGTGGTTAA 381278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79047998452443