Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq29212 241 1e-58
seq22586 187 3e-42
seq28581 129 7e-25
seq7920 113 5e-20
seq28099 93.3 5e-14
seq26127 93.3 5e-14
seq16549 91.5 2e-13
seq13677 91.5 2e-13
seq8244 91.5 2e-13
seq26793 89.7 6e-13
seq7524 89.7 6e-13
seq883 89.7 6e-13
seq28026 87.8 2e-12
seq14176 87.8 2e-12
seq1667 87.8 2e-12
seq25773 86.0 7e-12
seq9814 86.0 7e-12
seq28473 84.2 2e-11
seq18965 84.2 2e-11
seq7008 84.2 2e-11
seq3396 84.2 2e-11
seq24401 82.4 8e-11
seq24053 82.4 8e-11
seq16868 82.4 8e-11
seq9366 82.4 8e-11
seq9356 82.4 8e-11
seq3471 82.4 8e-11
>seq29212
Length=358297
Score = 241 bits (266), Expect = 1e-58
Identities = 430/627 (69%), Gaps = 7/627 (1%)
Strand=Plus/Minus
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
||||| ||||| ||||||||| ||| | |||||| ||||| || |||||||| ||
Sbjct 223233 GTACAGCAAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGA 223174
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201
||| ||||| || || | | || || || || | ||||||||| | | ||||| ||
Sbjct 223173 GAAAGTTAATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCACAGAAACTGCC 223114
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA--TTTGCG 93259
|| |||||||| ||||| ||| || || || | | |||||||||||| || ||
Sbjct 223113 GGAGAAAAATATGCCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGCC 223054
Query 93260 GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319
| | | ||||||||| |||||||||||||||||||| | || || | |||
Sbjct 223053 G-----CCGTCGATCCATTTCAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTT 222999
Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379
|| |||||| || ||| | | ||| |||||| || || || |||| |
Sbjct 222998 TCAGTAGCGTGGAAGAGGCGGTTTTTTTCGGTGGAATCTTTAATATAAGTTTCGAGGAGG 222939
Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439
||| |||||| ||||| |||| |||||| || || ||||||||||| || || |
Sbjct 222938 AGACTATACATCTCAGAGTGGATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGC 222879
Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499
|| |||| ||| || || |||| || | | |||||||||| || || |||
Sbjct 222878 GCCTCCGCGATTTGGACCTCTTTCATGAAGCGAACAGCGAGATTTTCTAGAACGATGCCA 222819
Query 93500 TCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC 93559
|||||||| || || || || | | ||| | || || || || || | |||||
Sbjct 222818 TCGGATGCGGCGAAGAAGGCAAGGACATGACTGATGAAGTGGCGTTCGTCGGCGTTAAGA 222759
Query 93560 TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCT 93619
|| | ||| | | ||||| || ||||| ||||| ||| |||||||||| || |||
Sbjct 222758 TTTTGCCAGTGTGGAAGATCGGAAGAGAGATCAACTTCCTCGGCAGTCCAAAAAGAGGCT 222699
Query 93620 TCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGA 93679
|| ||||| || ||||| |||||||| | | | ||||| ||||| || ||| || ||
Sbjct 222698 TCGGCTTTCTTATACATTTCCCATATCTGTGGGTATTGGATTGGGAACATGCAGAAGCGG 222639
Query 93680 TTAGGGTTATCTTTTAGTAACGGCTCT 93706
| ||||| ||| |||||||||
Sbjct 222638 TCCGGGTTGGAGGCTAGCAACGGCTCT 222612
>seq22586
Length=877411
Score = 187 bits (206), Expect = 3e-42
Identities = 397/591 (67%), Gaps = 9/591 (2%)
Strand=Plus/Plus
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
||||| ||||| || || || || | |||||| |||||||| || ||||| ||
Sbjct 443808 GTACAGCAAGCAAGCGAAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGA 443867
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201
||| ||||| || || | | || | || || | ||||||||| | | ||||| ||
Sbjct 443868 GAAAGTTAATCCGGGCATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCC 443927
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
|| ||||| || || || ||| ||||| || | | |||||||| ||| || |
Sbjct 443928 GGAGAAAAAGATCCCCTCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCC 443987
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | ||||||||| | |||||| ||||||||||| | ||| || | || ||
Sbjct 443988 G---CCGTCGATCCATTTCATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTC 444044
Query 93322 GATAGCGTTAAATAG---GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378
||| ||| || || || | | || || |||||| |||||| || |||| |
Sbjct 444045 GATGGCGCGGAAAAGACGGTTCTTT---TCATCGGAATCTTTTATGTAAGTCTCGAGAAG 444101
Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438
||| ||||| || || |||| ||| || || || |||||||| || || ||| |
Sbjct 444102 GAGACTGTACATCTCGGAGTGGATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACG 444161
Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498
|| || | |||||| || |||| || | | | || || ||| |||||| ||
Sbjct 444162 CGCCTCGGAGATCTGGACCTCTTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCC 444221
Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG 93558
|||||| || || ||||| || | | || | || || || | |||||| | | ||
Sbjct 444222 ATCGGAGGCGGCGAAAAAGGCGAGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAG 444281
Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618
| ||||| | ||||| || ||||||||||| || | ||||||||||| ||
Sbjct 444282 AGTTTCCCAGTGACGAAGATCGGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGC 444341
Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669
||| ||||| |||||||| ||||||| ||| | ||||| || ||||| ||
Sbjct 444342 TTCGGCTTTCTTGTACATTTCCCATACTTCTGGGTATTGGATCGGAAACAT 444392
Score = 187 bits (206), Expect = 3e-42
Identities = 397/591 (67%), Gaps = 9/591 (2%)
Strand=Plus/Plus
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
||||| ||||| || || || || | |||||| |||||||| || ||||| ||
Sbjct 446943 GTACAGCAAGCAAGCGAAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGA 447002
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201
||| ||||| || || | | || | || || | ||||||||| | | ||||| ||
Sbjct 447003 GAAAGTTAATCCGGGCATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCC 447062
Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261
|| ||||| || || || ||| ||||| || | | |||||||| ||| || |
Sbjct 447063 GGAGAAAAAGATCCCCTCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCC 447122
Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321
| | ||||||||| | |||||| ||||||||||| | ||| || | || ||
Sbjct 447123 G---CCGTCGATCCATTTCATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTC 447179
Query 93322 GATAGCGTTAAATAG---GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378
||| ||| || || || | | || || |||||| |||||| || |||| |
Sbjct 447180 GATGGCGCGGAAAAGACGGTTCTTT---TCATCGGAATCTTTTATGTAAGTCTCGAGAAG 447236
Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438
||| ||||| || || |||| ||| || || || |||||||| || || ||| |
Sbjct 447237 GAGACTGTACATCTCGGAGTGGATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACG 447296
Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498
|| || | |||||| || |||| || | | | || || ||| |||||| ||
Sbjct 447297 CGCCTCGGAGATCTGGACCTCTTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCC 447356
Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG 93558
|||||| || || ||||| || | | || | || || || | |||||| | | ||
Sbjct 447357 ATCGGAGGCGGCGAAAAAGGCGAGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAG 447416
Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618
| ||||| | ||||| || ||||||||||| || | ||||||||||| ||
Sbjct 447417 AGTTTCCCAGTGACGAAGATCGGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGC 447476
Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669
||| ||||| |||||||| ||||||| ||| | ||||| || ||||| ||
Sbjct 447477 TTCGGCTTTCTTGTACATTTCCCATACTTCTGGGTATTGGATCGGAAACAT 447527
>seq28581
Length=397638
Score = 129 bits (142), Expect = 7e-25
Identities = 164/222 (74%), Gaps = 9/222 (4%)
Strand=Plus/Plus
Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141
||||| ||||| ||||||||| ||| | |||||| ||||| || |||||||| ||
Sbjct 34073 GTACAGCAAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGA 34132
Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTAC 93200
||| ||||| || || | | || || || || | ||||||||| | ||| ||||| |
Sbjct 34133 GAAAGTTAATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGC-GCAGAAACTGC 34191
Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA--TTTGC 93258
| || |||||||| ||||| ||| || || || | | |||||||||||| || ||
Sbjct 34192 CGGAGAAAAATATGCCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGC 34251
Query 93259 GGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTT 93300
|| | | ||||||||| ||||||||||||||||||||
Sbjct 34252 GG-----CCGTCGATCCATTTGAAAGCCCAATCGGCTTTTTT 34288
Score = 111 bits (122), Expect = 2e-19
Identities = 210/309 (68%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 93398 TGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACT 93457
|||| |||||| || || ||||||||||| || || | || || | ||| || ||
Sbjct 34937 TGGATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGCGCCTCTGCGATTTGGACC 34996
Query 93458 TCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaa 93517
|||| || | | |||||||||| ||| || ||||||||||| || || |
Sbjct 34997 TCTTTCATGAAGCGAACGGCGAGATTTTCGAGGACGATGCCATCGGATGCGGCGAAGTAG 35056
Query 93518 GCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGA 93577
|| | | ||| | || || || || || | |||| || | ||| | | |||
Sbjct 35057 GCAAGAACATGACTGATGAAGTGGCGTTCGTCGGCGGTAAGATTTTGCCAGTGTGGAAGA 35116
Query 93578 TCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATA 93637
|| || ||||| ||||| ||| |||||||||| || ||||| ||||| ||||||||
Sbjct 35117 TCGGAAGAGAGATCAACTTCCTCGGCAGTCCAAAAAGAGGCTTCGGCTTTCTTGTACATT 35176
Query 93638 TCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGT 93697
|||||||| | | | ||||| ||||| || ||| || || | ||||| |||
Sbjct 35177 TCCCATATCTGTGGGTATTGGATTGGGAACATGCAGAAGCGGTCCGGGTTGGAGGCTAGC 35236
Query 93698 AACGGCTCT 93706
|||||||||
Sbjct 35237 AACGGCTCT 35245
>seq7920
Length=357604
Score = 113 bits (124), Expect = 5e-20
Identities = 194/282 (69%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
||| || || |||| ||| || || || |||||||| || || ||| | || || |
Sbjct 357604 CATCTCGGAGTGGATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGA 357545
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
|||||| || |||| || | | | || || ||| |||||| |||||||| ||
Sbjct 357544 GATCTGGACCTCTTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGC 357485
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCA 93567
|| ||||| || | | || | || || || | |||||| | | || | |||||
Sbjct 357484 GGCGAAAAAGGCGAGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCA 357425
Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627
| ||||| || ||||||||||| || | ||||||||||| ||||| |||||
Sbjct 357424 GTGACGAAGATCGGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTT 357365
Query 93628 TTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669
|||||||| ||||||| ||| | ||||| || ||||| ||
Sbjct 357364 CTTGTACATTTCCCATACTTCTGGGTATTGGATCGGAAACAT 357323
>seq28099
Length=360303
Score = 93.3 bits (102), Expect = 5e-14
Identities = 85/105 (81%), Gaps = 7/105 (7%)
Strand=Plus/Minus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320
|||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 274579 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAG 274522
Query 126321 -GCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTT 126364
|||||||||| || ||||| ||||| |||| | ||| || |||
Sbjct 274521 GGCGTGGGTTCAAATCCCACTTCTGAC-AATTTTAATTTGATTTT 274478
>seq26127
Length=392893
Score = 93.3 bits (102), Expect = 5e-14
Identities = 85/106 (80%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 143628 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 143571
Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366
|||||||||| || ||||| |||||| ||||| | | ||||||
Sbjct 143570 GCGTGGGTTCAAATCCCACTTCTGACATTTTATTTTAAGCATTTTT 143525
Score = 89.7 bits (98), Expect = 6e-13
Identities = 77/94 (82%), Gaps = 6/94 (6%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 141152 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 141095
Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATT 126354
|||||||||| || ||||| |||||| |||||
Sbjct 141094 GCGTGGGTTCAAATCCCACTTCTGACATTTTATT 141061
>seq16549
Length=539039
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/84 (85%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| |||||||| | | | |||||
Sbjct 485168 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTTAGAGAGCG 485227
Query 126324 TGGGTTCGAACCCCACACCTGACA 126347
||||||| || ||||| ||||||
Sbjct 485228 TGGGTTCAAATCCCACTTCTGACA 485251
>seq13677
Length=344455
Score = 91.5 bits (100), Expect = 2e-13
Identities = 79/97 (81%), Gaps = 6/97 (6%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320
|||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 181353 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAG 181410
Query 126321 -GCGTGGGTTCGAACCCCACACCTGACAAATTATTAT 126356
|||||||||| || ||||| |||||| |||| ||
Sbjct 181411 GGCGTGGGTTCAAATCCCACTTCTGACATTTTATAAT 181447
Score = 87.8 bits (96), Expect = 2e-12
Identities = 73/88 (83%), Gaps = 6/88 (7%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320
|||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 181797 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAG 181854
Query 126321 -GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||| || ||||| ||||||
Sbjct 181855 GGCGTGGGTTCAAATCCCACTTCTGACA 181882
>seq8244
Length=302565
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/84 (85%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| |||||||| | | | |||||
Sbjct 105839 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTTAGAGAGCG 105898
Query 126324 TGGGTTCGAACCCCACACCTGACA 126347
||||||| || ||||| ||||||
Sbjct 105899 TGGGTTCAAATCCCACTTCTGACA 105922
Score = 91.5 bits (100), Expect = 2e-13
Identities = 71/84 (85%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| |||||||| | | | |||||
Sbjct 108064 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTTAGAGAGCG 108123
Query 126324 TGGGTTCGAACCCCACACCTGACA 126347
||||||| || ||||| ||||||
Sbjct 108124 TGGGTTCAAATCCCACTTCTGACA 108147
>seq26793
Length=326828
Score = 89.7 bits (98), Expect = 6e-13
Identities = 85/106 (80%), Gaps = 7/106 (7%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 288193 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 288136
Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366
|||||||||| || ||||| |||||| || || || |||||||
Sbjct 288135 GCGTGGGTTCAAATCCCACTTCTGACATTTTGTT-TTCTAATTTTT 288091
>seq7524
Length=221352
Score = 89.7 bits (98), Expect = 6e-13
Identities = 77/94 (82%), Gaps = 6/94 (6%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 127071 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 127128
Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATT 126354
|||||||||| || ||||| |||||| |||||
Sbjct 127129 GCGTGGGTTCAAATCCCACTTCTGACATTTTATT 127162
Score = 89.7 bits (98), Expect = 6e-13
Identities = 77/94 (82%), Gaps = 6/94 (6%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 128492 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 128549
Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATT 126354
|||||||||| || ||||| |||||| |||||
Sbjct 128550 GCGTGGGTTCAAATCCCACTTCTGACATTTTATT 128583
>seq883
Length=246956
Score = 89.7 bits (98), Expect = 6e-13
Identities = 84/106 (79%), Gaps = 6/106 (6%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 227023 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 226966
Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366
|||||||||| || ||||| |||||| || | || |||||||
Sbjct 226965 GCGTGGGTTCAAATCCCACTTCTGACATTTTTGTTTTCTAATTTTT 226920
>seq28026
Length=354345
Score = 87.8 bits (96), Expect = 2e-12
Identities = 73/88 (83%), Gaps = 6/88 (7%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320
|||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 305212 CAGTCAGGGTGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAG 305269
Query 126321 -GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||| || ||||| ||||||
Sbjct 305270 GGCGTGGGTTCAAATCCCACTTCTGACA 305297
Score = 87.8 bits (96), Expect = 2e-12
Identities = 73/88 (83%), Gaps = 6/88 (7%)
Strand=Plus/Plus
Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320
|||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 308478 CAGTCAGGGTGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAG 308535
Query 126321 -GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||| || ||||| ||||||
Sbjct 308536 GGCGTGGGTTCAAATCCCACTTCTGACA 308563
Score = 82.4 bits (90), Expect = 8e-11
Identities = 73/90 (81%), Gaps = 6/90 (7%)
Strand=Plus/Plus
Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA- 126320
|||||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| ||
Sbjct 311489 TACAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAG 311546
Query 126321 ---GCGTGGGTTCGAACCCCACACCTGACA 126347
|||| |||| || ||||| ||||||
Sbjct 311547 AGGGCGTATGTTCAAATCCCACTTCTGACA 311576
>seq14176
Length=126844
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/94 (82%), Gaps = 3/94 (3%)
Strand=Plus/Plus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| |||||||||||||||||||||||||||||| | |||||| || | |||||||
Sbjct 117205 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 117262
Query 126328 TTCGAACCCCACACCTGACAAA-TTATTATTGGA 126360
||| || |||||| ||| |||| || ||||| ||
Sbjct 117263 TTCAAATCCCACAGCTGTCAAAGTTTTTATTTGA 117296
>seq1667
Length=681655
Score = 87.8 bits (96), Expect = 2e-12
Identities = 76/93 (82%), Gaps = 6/93 (6%)
Strand=Plus/Plus
Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA-- 126320
||||||||| ||||||||||||||||| |||||| | ||| |||||| ||||| ||
Sbjct 215173 ACAGTCAGGATGGCCGAGTGGTCTAAGACGCCAGGATCAAGTTCTGGT--CCTCGTGAGA 215230
Query 126321 --GCGTGGGTTCGAACCCCACACCTGACAAATT 126351
|||||||||| || ||||| ||||||||||
Sbjct 215231 GGGCGTGGGTTCAAATCCCACTTCTGACAAATT 215263
>seq25773
Length=68684
Score = 86.0 bits (94), Expect = 7e-12
Identities = 77/96 (80%), Gaps = 2/96 (2%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| |||||||||||||||||||||||||||||| | |||||| || | |||||||
Sbjct 7669 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 7612
Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATT 126363
||| || |||||| ||| || || ||||| ||||
Sbjct 7611 TTCAAATCCCACAGCTGTCATGTTTTTATTTAAATT 7576
>seq9814
Length=636828
Score = 86.0 bits (94), Expect = 7e-12
Identities = 70/84 (83%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| |||||||| | | |||||
Sbjct 235944 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGCG 236003
Query 126324 TGGGTTCGAACCCCACACCTGACA 126347
||||||| || ||||| ||||||
Sbjct 236004 TGGGTTCAAATCCCACTTCTGACA 236027
>seq28473
Length=13073
Score = 84.2 bits (92), Expect = 2e-11
Identities = 71/86 (83%), Gaps = 6/86 (7%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321
|||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || |
Sbjct 7649 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 7706
Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347
||||||||| || ||||| ||||||
Sbjct 7707 CGTGGGTTCAAATCCCACTTCTGACA 7732
>seq18965
Length=327896
Score = 84.2 bits (92), Expect = 2e-11
Identities = 82/103 (80%), Gaps = 6/103 (6%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| |||||||||||||||||||||||||||||| | |||||| || | |||||||
Sbjct 239408 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 239351
Query 126328 TTCGAACCCCACACCTGACAAATT--ATTATTGGAATTTTTGT 126368
||| || |||||| ||| || || |||||| |||||| ||
Sbjct 239350 TTCAAATCCCACAGCTGTCAGTTTTAATTATT--AATTTTAGT 239310
>seq7008
Length=224685
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/85 (82%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--GC 126322
||||||| ||||||||||||||||||||||||| | ||| |||||||| | | || ||
Sbjct 12148 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGGGC 12207
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||| | ||||| ||||||
Sbjct 12208 GTGGGTTCAAGTCCCACTTCTGACA 12232
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/85 (82%), Gaps = 2/85 (2%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--GC 126322
||||||| ||||||||||||||||||||||||| | ||| |||||||| | | || ||
Sbjct 14265 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGGGC 14324
Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347
|||||||| | ||||| ||||||
Sbjct 14325 GTGGGTTCAAGTCCCACTTCTGACA 14349
>seq3396
Length=132863
Score = 84.2 bits (92), Expect = 2e-11
Identities = 71/86 (83%), Gaps = 6/86 (7%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321
|||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || |
Sbjct 25851 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 25908
Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347
||||||||| || ||||| ||||||
Sbjct 25909 CGTGGGTTCAAATCCCACTTCTGACA 25934
Score = 84.2 bits (92), Expect = 2e-11
Identities = 71/86 (83%), Gaps = 6/86 (7%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321
|||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || |
Sbjct 28689 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 28746
Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347
||||||||| || ||||| ||||||
Sbjct 28747 CGTGGGTTCAAATCCCACTTCTGACA 28772
>seq24401
Length=368124
Score = 82.4 bits (90), Expect = 8e-11
Identities = 74/92 (80%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| |||||||| | | |||||
Sbjct 267554 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGCG 267495
Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTA 126355
||||||| || |||| |||||| ||| ||
Sbjct 267494 TGGGTTCAAATTCCACTTCTGACATTTTACTA 267463
Score = 82.4 bits (90), Expect = 8e-11
Identities = 74/92 (80%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323
|||||| ||||||||||||||||||||||||| | ||| |||||||| | | |||||
Sbjct 272373 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGCG 272314
Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTA 126355
||||||| || |||| |||||| ||| ||
Sbjct 272313 TGGGTTCAAATTCCACTTCTGACATTTTACTA 272282
>seq24053
Length=89515
Score = 82.4 bits (90), Expect = 8e-11
Identities = 69/84 (82%), Gaps = 2/84 (2%)
Strand=Plus/Plus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| |||||||||||||||||||||||||||||| | |||||| || | |||||||
Sbjct 58673 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 58730
Query 126328 TTCGAACCCCACACCTGACAAATT 126351
||| || |||||| ||| ||| ||
Sbjct 58731 TTCAAATCCCACAGCTGTCAATTT 58754
>seq16868
Length=58163
Score = 82.4 bits (90), Expect = 8e-11
Identities = 69/84 (82%), Gaps = 2/84 (2%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| |||||||||||||||||||||||||||||| | |||||| || | |||||||
Sbjct 44178 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 44121
Query 126328 TTCGAACCCCACACCTGACAAATT 126351
||| || |||||| ||| ||| ||
Sbjct 44120 TTCAAATCCCACAGCTGTCAAGTT 44097
>seq9366
Length=318769
Score = 82.4 bits (90), Expect = 8e-11
Identities = 71/87 (82%), Gaps = 6/87 (7%)
Strand=Plus/Plus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320
||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| ||
Sbjct 56324 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAAG 56381
Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347
|||||||||| || ||||| ||||||
Sbjct 56382 GCGTGGGTTCAAATCCCACTTCTGACA 56408
>seq9356
Length=329664
Score = 82.4 bits (90), Expect = 8e-11
Identities = 72/89 (81%), Gaps = 2/89 (2%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| |||||||||||||||||||||||||||||| | |||||| || | |||||||
Sbjct 61095 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 61038
Query 126328 TTCGAACCCCACACCTGACAAATTATTAT 126356
||| || |||||| ||| || | |||||
Sbjct 61037 TTCAAATCCCACAGCTGTCACTTCATTAT 61009
>seq3471
Length=175800
Score = 82.4 bits (90), Expect = 8e-11
Identities = 82/105 (78%), Gaps = 6/105 (6%)
Strand=Plus/Plus
Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321
|||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || |
Sbjct 103817 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAGGG 103874
Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366
||||||||| || ||||| |||||| || | || |||||||
Sbjct 103875 CGTGGGTTCAAATCCCACTTCTGACATTTTCGTTTTCTAATTTTT 103919
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556653710429240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |