Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq12882 150 4e-31
seq3223 147 4e-30
seq1917 96.9 7e-15
seq25723 95.1 2e-14
seq15404 95.1 2e-14
seq6786 95.1 2e-14
seq390 95.1 2e-14
seq25699 93.3 9e-14
seq22176 93.3 9e-14
seq21359 93.3 9e-14
seq20923 93.3 9e-14
seq17687 93.3 9e-14
seq12962 93.3 9e-14
seq11356 93.3 9e-14
seq8590 93.3 9e-14
seq7789 93.3 9e-14
seq6864 93.3 9e-14
seq6304 93.3 9e-14
seq5629 93.3 9e-14
seq5509 93.3 9e-14
seq744 93.3 9e-14
seq19304 91.5 3e-13
seq10184 91.5 3e-13
seq7055 91.5 3e-13
seq25383 87.8 4e-12
seq10038 84.2 4e-11
seq8899 84.2 4e-11
seq8017 84.2 4e-11
>seq12882
Length=211119
Score = 150 bits (166), Expect = 4e-31
Identities = 208/291 (71%), Gaps = 0/291 (0%)
Strand=Plus/Plus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577
|||||||| | ||||| || ||||| || || | |||| | | | || |||||
Sbjct 191009 GACTTCATTAATAAGGAACTTATTCTGTTTTCCATGGCTGATCTTCAAAGATCAATTCCT 191068
Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637
| |||| |||||||| ||||| || || |||||||| || || |||||| ||
Sbjct 191069 TCCATGGTTGATGGCCTGAAGCCTGGTCAACGGAAGATCCTTTTCTGTGCTTTCAAGAGG 191128
Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697
|| | || || || ||||| |||| ||||| |||||||| || || |||||
Sbjct 191129 AATTTTGTACATGAGGCAAAGGTTTCTCAATTTTCGGGTTATGTTTCGGAGCATTCTGCT 191188
Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757
|||||||| |||||||||||||| || ||||||| || ||||| ||||| | ||||
Sbjct 191189 TACCATCATGGTGAGCAGAGTCTTTGTAGTACCATTGTTGGAATGGCCCAGGATTTTGTG 191248
Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808
|||||||||||||| || | || | || ||||| |||||| |||||
Sbjct 191249 GGCAGTAACAACATAAATCTTCTTCGTCCTGGGGGTCAATTTGGTACTCGT 191299
>seq3223
Length=8379
Score = 147 bits (162), Expect = 4e-30
Identities = 207/291 (71%), Gaps = 0/291 (0%)
Strand=Plus/Minus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577
|||||||| | ||||| || ||||| || || | ||| | | | || |||||
Sbjct 1498 GACTTCATTAATAAGGAACTTATTCTGTTTTCCATGGCTGACCTTCAAAGATCAATTCCT 1439
Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637
| |||| |||||||| ||||| || | |||||||| || || |||||| ||
Sbjct 1438 TCCATGGTTGATGGCCTGAAGCCTGGTCAAAGGAAGATCCTTTTCTGTGCTTTCAAGAGG 1379
Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697
|| | || || || ||||| |||| ||||| |||||||| || || |||||
Sbjct 1378 AATTTTGTACATGAGGCAAAGGTTTCTCAATTTTCGGGTTATGTTTCGGAGCATTCTGCT 1319
Query 218698 TACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTG 218757
|||||||| |||||||||||||| || ||||||| || ||||| ||||| | ||||
Sbjct 1318 TACCATCATGGTGAGCAGAGTCTTTGTAGTACCATTGTTGGAATGGCCCAGGATTTTGTG 1259
Query 218758 GGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGT 218808
|||||||||||||| ||| | || | || ||||| |||||| |||||
Sbjct 1258 GGCAGTAACAACATAAACCTTCTTCGTCCTGGGGGTCAATTTGGTACTCGT 1208
>seq1917
Length=92267
Score = 96.9 bits (106), Expect = 7e-15
Identities = 62/68 (91%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|||||||| |||||||||||||||||||| || ||||||| || |||||||||||||||
Sbjct 91712 ATAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 91653
Query 142561 AGCCCCAC 142568
||||||||
Sbjct 91652 AGCCCCAC 91645
>seq25723
Length=333947
Score = 95.1 bits (104), Expect = 2e-14
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
||||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||
Sbjct 48079 TAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 48138
Query 142562 GCCCCAC 142568
|||||||
Sbjct 48139 GCCCCAC 48145
>seq15404
Length=261492
Score = 95.1 bits (104), Expect = 2e-14
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
||||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||
Sbjct 6267 TAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 6208
Query 142562 GCCCCAC 142568
|||||||
Sbjct 6207 GCCCCAC 6201
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 6424 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 6365
Query 142563 CCCCAC 142568
||||||
Sbjct 6364 CCCCAC 6359
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 6115 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 6056
Query 142564 CCCAC 142568
|||||
Sbjct 6055 CCCAC 6051
>seq6786
Length=163526
Score = 95.1 bits (104), Expect = 2e-14
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 151392 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 151451
Query 142563 CCCCACATCGGGCAGAAGT 142581
|||||| |||| |||||
Sbjct 151452 CCCCACGGTGGGC-GAAGT 151469
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 143800 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 143859
Query 142563 CCCCAC 142568
||||||
Sbjct 143860 CCCCAC 143865
>seq390
Length=466881
Score = 95.1 bits (104), Expect = 2e-14
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561
||||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||
Sbjct 116801 TAGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 116860
Query 142562 GCCCCAC 142568
|||||||
Sbjct 116861 GCCCCAC 116867
>seq25699
Length=219776
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 72800 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 72859
Query 142563 CCCCAC 142568
||||||
Sbjct 72860 CCCCAC 72865
>seq22176
Length=88192
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 6505 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 6446
Query 142563 CCCCAC 142568
||||||
Sbjct 6445 CCCCAC 6440
>seq21359
Length=171565
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 148152 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTCGTGGTCGTGGGTTCGAG 148211
Query 142563 CCCCAC 142568
||||||
Sbjct 148212 CCCCAC 148217
>seq20923
Length=347621
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 136792 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 136851
Query 142563 CCCCAC 142568
||||||
Sbjct 136852 CCCCAC 136857
>seq17687
Length=135528
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 2127 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2186
Query 142563 CCCCAC 142568
||||||
Sbjct 2187 CCCCAC 2192
>seq12962
Length=358204
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 57277 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 57336
Query 142563 CCCCAC 142568
||||||
Sbjct 57337 CCCCAC 57342
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 74660 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 74719
Query 142563 CCCCAC 142568
||||||
Sbjct 74720 CCCCAC 74725
>seq11356
Length=46196
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 29444 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 29503
Query 142563 CCCCAC 142568
||||||
Sbjct 29504 CCCCAC 29509
>seq8590
Length=713001
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 229982 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 230041
Query 142563 CCCCAC 142568
||||||
Sbjct 230042 CCCCAC 230047
>seq7789
Length=699862
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 142527 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 142468
Query 142563 CCCCAC 142568
||||||
Sbjct 142467 CCCCAC 142462
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 142374 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 142315
Query 142564 CCCAC 142568
|||||
Sbjct 142314 CCCAC 142310
>seq6864
Length=117486
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 1798 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 1857
Query 142563 CCCCAC 142568
||||||
Sbjct 1858 CCCCAC 1863
>seq6304
Length=176748
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 101207 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 101266
Query 142563 CCCCAC 142568
||||||
Sbjct 101267 CCCCAC 101272
>seq5629
Length=595367
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 493880 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 493821
Query 142563 CCCCAC 142568
||||||
Sbjct 493820 CCCCAC 493815
>seq5509
Length=140677
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 109821 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 109762
Query 142563 CCCCAC 142568
||||||
Sbjct 109761 CCCCAC 109756
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 111738 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 111679
Query 142563 CCCCAC 142568
||||||
Sbjct 111678 CCCCAC 111673
>seq744
Length=214131
Score = 93.3 bits (102), Expect = 9e-14
Identities = 60/66 (91%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 72151 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 72092
Query 142563 CCCCAC 142568
||||||
Sbjct 72091 CCCCAC 72086
>seq19304
Length=390649
Score = 91.5 bits (100), Expect = 3e-13
Identities = 61/68 (90%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 142501 ATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCG 142560
|| ||||| |||||||||||||||||||| || ||||||| || |||||||||||||||
Sbjct 282914 ATTGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCG 282973
Query 142561 AGCCCCAC 142568
||||||||
Sbjct 282974 AGCCCCAC 282981
>seq10184
Length=58452
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 49941 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 49882
Query 142564 CCCAC 142568
|||||
Sbjct 49881 CCCAC 49877
>seq7055
Length=273222
Score = 91.5 bits (100), Expect = 3e-13
Identities = 59/65 (91%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563
||||| |||||||||||||||||||| || ||||||| || ||||||||||||||||||
Sbjct 49559 GCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 49618
Query 142564 CCCAC 142568
|||||
Sbjct 49619 CCCAC 49623
>seq25383
Length=331321
Score = 87.8 bits (96), Expect = 4e-12
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| | ||||||| || |||||||||||||||||
Sbjct 177499 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAACGCTCTTAACCTTGTGGTCGTGGGTTCGAG 177558
Query 142563 CCCCAC 142568
||||||
Sbjct 177559 CCCCAC 177564
>seq10038
Length=231320
Score = 84.2 bits (92), Expect = 4e-11
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||||||||||||
Sbjct 61 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 2
Query 142563 C 142563
|
Sbjct 1 C 1
>seq8899
Length=514212
Score = 84.2 bits (92), Expect = 4e-11
Identities = 59/66 (89%), Gaps = 1/66 (2%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||||||||||| || ||||||| || |||||||| ||||||||
Sbjct 412383 AGCCCGTCTAGCTCAGTCGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGT-GGTTCGAG 412441
Query 142563 CCCCAC 142568
||||||
Sbjct 412442 CCCCAC 412447
>seq8017
Length=444958
Score = 84.2 bits (92), Expect = 4e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||| ||||||| || ||||||| || |||||||| ||||||||
Sbjct 54461 AGCCCGTCTAGCTCAGTCGGAAGAGCGCAAGGCTCTTAACCTTGTGGTCGTCGGTTCGAG 54520
Query 142563 CCCCAC 142568
||||||
Sbjct 54521 CCCCAC 54526
Score = 84.2 bits (92), Expect = 4e-11
Identities = 58/66 (88%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562
|||||| |||||||||||| ||||||| || ||||||| || |||||||| ||||||||
Sbjct 58889 AGCCCGTCTAGCTCAGTCGGAAGAGCGCAAGGCTCTTAACCTTGTGGTCGTCGGTTCGAG 58948
Query 142563 CCCCAC 142568
||||||
Sbjct 58949 CCCCAC 58954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027445004350591
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |