Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03] 29,751 sequences; 2,566,742,836 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq28581 84.2 3e-11 >seq28581 Length=397638 Score = 84.2 bits (92), Expect = 3e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232 || || ||||| || ||||| | ||||||||||| | ||||| || || || || ||| Sbjct 34080 AAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTT 34139 Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA-AAAGATCCAGAAAA 37291 ||||| |||||||| || | ||||| | ||||||||| || ||| ||| || || || Sbjct 34140 AATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGC-GCAGAAACTGCCGGAGAA 34198 Query 37292 GAAAATACCTTCAAC 37306 || || ||||| || Sbjct 34199 AAATATGCCTTCTAC 34213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592096524786040