Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq28581 84.2 3e-11
>seq28581
Length=397638
Score = 84.2 bits (92), Expect = 3e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 37173 AAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTT 37232
|| || ||||| || ||||| | ||||||||||| | ||||| || || || || |||
Sbjct 34080 AAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTT 34139
Query 37233 AATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCA-AAAGATCCAGAAAA 37291
||||| |||||||| || | ||||| | ||||||||| || ||| ||| || || ||
Sbjct 34140 AATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGC-GCAGAAACTGCCGGAGAA 34198
Query 37292 GAAAATACCTTCAAC 37306
|| || ||||| ||
Sbjct 34199 AAATATGCCTTCTAC 34213
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592096524786040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |