Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq12755 111 8e-20
>seq12755
Length=243795
Score = 111 bits (122), Expect = 8e-20
Identities = 159/222 (72%), Gaps = 4/222 (2%)
Strand=Plus/Minus
Query 26064 TACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCA 26123
||||||||||||| ||||| |||||||| || |||| ||||| |||||||| || ||
Sbjct 40261 TACCTTTTCTTTTCCCTCCTCCTTGATCAACATATCGAGCAGTATCATTGAACACCCGCA 40202
Query 26124 ACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATC 26183
|||||| || | |||| | || || ||||| | | |||| | ||||| | ||
Sbjct 40201 GCATTGGGACAATTCCATTAGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTC 40142
Query 26184 TAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATC-- 26241
||||| |||| || || ||| ||||| ||||| |||| ||| | ||||| ||
Sbjct 40141 GAATATTGTGAACAGAAACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCT 40082
Query 26242 TGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283
| ||| || || | ||||||| || |||||| |||||||
Sbjct 40081 TCAAA--GTTTCATATATTCCTTCAATACTATCATCTTTCAT 40042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252948250147325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |