Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03] 29,751 sequences; 2,566,742,836 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq13744 141 3e-28 seq24296 138 3e-27 seq7139 113 1e-19 seq216 111 5e-19 seq12488 105 2e-17 seq27182 104 7e-17 seq21348 104 7e-17 seq16259 102 2e-16 seq21511 98.7 3e-15 seq2295 98.7 3e-15 seq1041 96.9 1e-14 seq4101 95.1 4e-14 seq22013 84.2 6e-11 >seq13744 Length=547370 Score = 141 bits (156), Expect = 3e-28 Identities = 363/543 (67%), Gaps = 16/543 (3%) Strand=Plus/Minus Query 288817 CCAGATACATCAGGCAAACCCACCCGCACCCTCCTATCAAACCTACCAGAACGAGTTAAT 288876 |||| ||||||||| | | || ||| || ||||||||||| | || || Sbjct 417145 CCAGCAACATCAGGCCTATCAACTGTAACCTGCCGGTCAAACCTACCCGGTCGCAACAAA 417086 Query 288877 GCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT-AGATTCGGTTTG 288935 || | || | | ||| | |||||| ||||||||||| |||||| | | | || Sbjct 417085 GCGGCATCAAGAACATCCGGTCTGTTGGTTGCTGCCAA---AACAATGACACCAGAATTC 417029 Query 288936 CTT--AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993 | | |||||||||||| || || | ||||| | ||| || || || ||||||||| Sbjct 417028 CCTGAAAATCCATCCATCTCAGTCAACAACTGATTGATTGTCTGCTCTCTCTCATCATTT 416969 Query 288994 GAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATG 289053 |||| | | ||| | | ||| | | | |||||||||||||| || |||||| Sbjct 416968 ---CCTCCTCCAAGACCAGCTCCTCTC---TGTCTCCCAACAGCATCAATCTCATCAATG 416915 Query 289054 AAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCT 289113 || | | || |||| || | | || | | ||||| || ||||| | |||||| Sbjct 416914 AAGACGATGCAAGGAGCCTTGGATTTGGCCTTATCGAATAAGTCCCTTACTCTGGATGCA 416855 Query 289114 CCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATT 289172 || | ||||| ||| || ||||| |||||||| | | ||| | || | || Sbjct 416854 CCTACTCCAACGAACAACTCCACAAACTCAGAAGCAGCG-CATGAGAAAAACGGAACCCC 416796 Query 289173 TGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAA 289232 ||||| ||||||||||| ||||||| || ||||| || || ||||| ||||| | || Sbjct 416795 GGCTTCTCCTGCTACTGCTCTCGCCAATAGAGTCTTTCCAGTACCAGGAGGTCCAACCAA 416736 Query 289233 TAGAACTCCCTTT-GGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAA 289291 || ||| ||||| || | ||| || || || | || || || ||| |||| || | Sbjct 416735 TA-AACAACCTTTCGGGATTTTAGCTCCTAAAGCTGTGTACTTGTCTGGGTTCTTCAAGA 416677 Query 289292 ATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAG 289351 | || |||| || | ||||| ||||||||| ||| ||| ||||| || | || | Sbjct 416676 AATCGACAACCTCTTGGAGTTCTAATTTTGCCTGGTCAGCTCCCGCTACGTCGGAGAAGG 416617 Query 289352 TAA 289354 ||| Sbjct 416616 TAA 416614 Score = 138 bits (152), Expect = 3e-27 Identities = 362/543 (67%), Gaps = 16/543 (3%) Strand=Plus/Minus Query 288817 CCAGATACATCAGGCAAACCCACCCGCACCCTCCTATCAAACCTACCAGAACGAGTTAAT 288876 |||| ||||||||| | | || ||| || ||||||||||| | || || Sbjct 413044 CCAGCAACATCAGGCCTATCAACTGTAACCTGCCGGTCAAACCTACCCGGTCGCAACAAA 412985 Query 288877 GCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT-AGATTCGGTTTG 288935 || | || | | ||| | |||||| ||||||||||| |||||| | | | || Sbjct 412984 GCGGCATCAAGAACATCCGGTCTGTTGGTTGCTGCCAA---AACAATGACACCAGAATTC 412928 Query 288936 CTT--AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993 | | |||||||||||| || || | ||||| | ||| || || || ||||||||| Sbjct 412927 CCTGAAAATCCATCCATCTCAGTCAACAACTGATTGATTGTCTGCTCTCTCTCATCATTT 412868 Query 288994 GAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATG 289053 |||| | | ||| | | ||| | | | |||||||||||||| || |||||| Sbjct 412867 ---CCTCCTCCAAGACCAGCTCCTCTC---TGTCTCCCAACAGCATCAATCTCATCAATG 412814 Query 289054 AAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCT 289113 || | | || |||| || | | || | | ||||| || ||||| | |||||| Sbjct 412813 AAGACGATGCAAGGAGCCTTGGATTTGGCCTTATCGAATAAGTCCCTTACTCTGGATGCA 412754 Query 289114 CCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATT 289172 || | ||||| ||| || ||||| |||||||| | | ||| | || | || Sbjct 412753 CCTACTCCAACGAACAACTCCACAAACTCAGAAGCAGCG-CATGAGAAAAACGGAACCCC 412695 Query 289173 TGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAA 289232 ||||| ||||||||||| ||||||| || ||||| || || ||||| || || | || Sbjct 412694 GGCTTCTCCTGCTACTGCTCTCGCCAATAGAGTCTTTCCAGTACCAGGAGGGCCAACCAA 412635 Query 289233 TAGAACTCCCTTT-GGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAA 289291 || ||| ||||| || | ||| || || || | || || || ||| |||| || | Sbjct 412634 TA-AACAACCTTTCGGGATTTTAGCTCCTAAAGCTGTGTACTTGTCTGGGTTCTTCAAGA 412576 Query 289292 ATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAG 289351 | || |||| || | ||||| ||||||||| ||| ||| ||||| || | || | Sbjct 412575 AATCGACAACCTCTTGGAGTTCTAATTTTGCCTGGTCAGCTCCCGCTACGTCGGAGAAGG 412516 Query 289352 TAA 289354 ||| Sbjct 412515 TAA 412513 >seq24296 Length=628690 Score = 138 bits (152), Expect = 3e-27 Identities = 362/543 (67%), Gaps = 16/543 (3%) Strand=Plus/Minus Query 288817 CCAGATACATCAGGCAAACCCACCCGCACCCTCCTATCAAACCTACCAGAACGAGTTAAT 288876 |||| ||||||||| | | || ||| || ||||||||||| | || || Sbjct 202766 CCAGCAACATCAGGCCTATCAACTGTAACCTGCCGGTCAAACCTACCCGGTCGCAACAAA 202707 Query 288877 GCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAAT-AGATTCGGTTTG 288935 || | || | | ||| | |||||| ||||||||||| |||||| | | | || Sbjct 202706 GCGGCATCAAGAACATCCGGTCTGTTGGTTGCTGCCAA---AACAATGACACCAGAATTC 202650 Query 288936 CTT--AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993 | | |||||||||||| || || | ||||| | ||| || || || ||||||||| Sbjct 202649 CCTGAAAATCCATCCATCTCAGTCAACAACTGATTGATTGTCTGCTCTCTCTCATCATTT 202590 Query 288994 GAACCTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATG 289053 |||| | | ||| | | ||| | | | |||||||||||||| || |||||| Sbjct 202589 ---CCTCCTCCAAGACCAGCTCCTCTC---TGTCTCCCAACAGCATCAATCTCATCAATG 202536 Query 289054 AAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCT 289113 || | | || |||| || | | || | | ||||| || ||||| | |||||| Sbjct 202535 AAGACGATGCAAGGAGCCTTGGATTTGGCCTTATCGAATAAGTCCCTTACTCTGGATGCA 202476 Query 289114 CCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATT 289172 || | ||||| ||| || ||||| |||||||| | | ||| | || | || Sbjct 202475 CCTACTCCAACGAACAACTCCACAAACTCAGAAGCAG-CGCATGAGAAAAACGGAACCCC 202417 Query 289173 TGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAA 289232 ||||| || |||||||| ||||||| || ||||| || || ||||| ||||| | || Sbjct 202416 GGCTTCTCCCGCTACTGCTCTCGCCAATAGAGTCTTTCCAGTACCAGGAGGTCCAACCAA 202357 Query 289233 TAGAACTCCCTTT-GGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAA 289291 || ||| ||||| || | ||| || || || | || || || ||| |||| || | Sbjct 202356 TA-AACAACCTTTCGGGATTTTAGCTCCTAAAGCTGTGTACTTGTCTGGGTTCTTCAAGA 202298 Query 289292 ATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAG 289351 | || |||| || | ||||| ||||||||| ||| ||| ||||| || | || | Sbjct 202297 AATCGACAACCTCTTGGAGTTCTAATTTTGCCTGGTCAGCTCCCGCTACGTCGGAGAAGG 202238 Query 289352 TAA 289354 ||| Sbjct 202237 TAA 202235 >seq7139 Length=440615 Score = 113 bits (124), Expect = 1e-19 Identities = 316/474 (67%), Gaps = 26/474 (5%) Strand=Plus/Plus Query 288889 ATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTG---CTTAAATCCA 288945 || || |||||||| |||||||| | ||| | ||| |||| | || || ||| Sbjct 160817 ATGTCAGCTCTGTTAGTTGCTGCAATTACGATGATAC---CGGTGTTACCCTCGAAACCA 160873 Query 288946 TCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAA 289005 ||||| || |||| || ||||| ||||| || || |||||||| |||| Sbjct 160874 TCCATTTCGGTCAAAAGCTGGTTAAGAGTTTGCTCTCTCTCATCATTC---CCTC----- 160925 Query 289006 TCACCCGAATC-GCTCCtttttttA--CCAACAGCATCAATTTCGTCAATGAAAATCACA 289062 |||| | | | |||| ||| | ||||| ||||||||||| || | || | | | Sbjct 160926 -CACCAATACCAGTTCCTCTTTGTCGTCCAACGGCATCAATTTCATCCACAAAGACGATA 160984 Query 289063 CACGGAGAATTTTGTCTCGC--AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGAC 289120 || || | ||| | | || ||| ||| | || | || || || || |||| || Sbjct 160985 CAGGGGGCATTCTCCTTGGCCTTCTTGAAAAGA--TCACGAACTCGAGAAGCACCAACAC 161042 Query 289121 CAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCG 289179 ||||| ||||||| ||||| |||||| |||| | | || | ||||| ||| ||||| Sbjct 161043 CAACAAACATTTCAACAAACTCAGAACCGGA-AATGGAGAAGAATGGCACACCAGCTTCA 161101 Query 289180 CCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACT 289239 || || | |||| | || ||||| ||||| || |||||||| || || | ||||| Sbjct 161102 CCGGCAATTGCCTTAGCAAGAAGAGTCTTTCCGGTTCCAGGAGGGCCAATGAGAAGAACA 161161 Query 289240 CCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACA 289299 || || || | ||||| | | || || | || || ||||||| || || ||| Sbjct 161162 CCTTTAGGGATACGAGCCCCGACTGCGGTAAATCTTTCTGGCTTCTTTAAGAACTCCACA 161221 Query 289300 ATTTCC-TCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | ||| | ||| || | ||||| |||||| ||| || |||||| | || || Sbjct 161222 ACCTCCATGAAG-TCCTGCTTTGCTTCATCAACTCCAGCAACATCATCGAATGT 161274 >seq216 Length=206475 Score = 111 bits (122), Expect = 5e-19 Identities = 336/509 (66%), Gaps = 20/509 (4%) Strand=Plus/Plus Query 288853 TCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCC 288912 ||||||||||| | | ||| || | || | | ||||| ||||| ||||||||| Sbjct 161883 TCAAACCTACCGGGCCTCAATAAAGCCGCATCAAGAACATCGGGCCTGTTAGTTGCTGCC 161942 Query 288913 AATACAACAATAGATTCGGTTTGCTT---AAATCCATCCATACTTGTTAAAATTTGATTA 288969 || |||| | | ||| | | |||||||||||| || | | || || Sbjct 161943 AAAACAATGACAC---CGGAATTCCCCGAAAATCCATCCATCTCAGTCAGCAACTGGTTG 161999 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | ||| || || |||||||||||| |||| | | | || | |||||| | | | Sbjct 162000 ATTGTCTGCTCTCTTTCATCATTT---CCTCCTCCA--AGCCCA---GCTCCTCTCTGTC 162051 Query 289030 --CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 ||||||||||| || || || ||||| | | || || | || | | || || Sbjct 162052 TCCCAACAGCATCGATCTCATCTATGAATACAATGCAAGGCGCTTTGGATTTTGCCTTTT 162111 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 | || || || ||||| | ||| || || | ||||| ||| || ||||| || |||| Sbjct 162112 CGAACAAATCCCTTACCCTGGACGCGCCTACTCCAACGAACAACTCCACAAACTCCGAAG 162171 Query 289148 CGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | | | ||| | || | || ||||| ||||| || || ||||||| || ||| Sbjct 162172 CTG-CGCATGAGAAAAAGGGCACCCCGGCTTCCCCTGCCACGGCTCTCGCCAATAGAGTC 162230 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTT-GGTACTTTTGCCCCAGCAGA 289265 || || || ||||| || || |||||| ||| ||||| || | ||| || || || Sbjct 162231 TTGCCGGTACCAGGAGGGCCAACTAATA-AACAACCTTTCGGGATTTTAGCTCCTAAAGC 162289 Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 | || || || ||| |||| || || || |||| ||| | ||||| | ||||||| Sbjct 162290 TGTGTACTTGTCTGGGTTCTTCAAGAAATCGACAACTTCTTGGAGTTCCAACTTTGCCTG 162349 Query 289326 ATCACATCCTGCTACATCAGCAAAAGTAA 289354 ||| ||| ||||| |||||||| |||| Sbjct 162350 GTCAGCTCCAGCTACGTCAGCAAAGGTAA 162378 Score = 98.7 bits (108), Expect = 3e-15 Identities = 333/509 (65%), Gaps = 20/509 (4%) Strand=Plus/Plus Query 288853 TCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCC 288912 ||||||||||| | | ||| || | || | | ||||| ||||| ||||||||| Sbjct 160790 TCAAACCTACCGGGCCTCAATAAAGCCGCATCAAGAACATCGGGCCTGTTAGTTGCTGCC 160849 Query 288913 AATACAACAATAGATTCGGTTTGCTT---AAATCCATCCATACTTGTTAAAATTTGATTA 288969 || |||| | | ||| | | |||||||||||| || | | || || Sbjct 160850 AAAACAATGACAC---CGGAATTCCCCGAAAATCCATCCATCTCAGTCAGCAACTGGTTG 160906 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | ||| || || |||||||||||| |||| | | | || | |||||| | | | Sbjct 160907 ATTGTCTGCTCTCTTTCATCATTT---CCTCCTCCA--AGCCCA---GCTCCTCTCTGTC 160958 Query 289030 --CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 ||||||||||| || || || ||||| | | || || | || | | || || Sbjct 160959 TCCCAACAGCATCGATCTCATCTATGAATACAATGCAAGGCGCTTTGGATTTTGCCTTTT 161018 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 | || || || ||||| | ||| || || | ||||| ||| || ||||| || |||| Sbjct 161019 CGAACAAATCCCTTACCCTGGACGCGCCTACTCCAACGAACAACTCCACAAACTCCGAAG 161078 Query 289148 CGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | | | ||| | || | || ||||| ||||| || | ||||||| | || Sbjct 161079 CTG-CGCATGAGAAAAAGGGCACCCCGGCTTCCCCTGCCACGGATCTCGCCAATGGAGTT 161137 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTT-GGTACTTTTGCCCCAGCAGA 289265 || || || ||||| || || |||||| ||| ||||| || | ||| || || || Sbjct 161138 TTTCCGGTACCAGGAGGGCCAACTAATA-AACAACCTTTCGGGATTTTAGCTCCTAAAGC 161196 Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 | | || || || ||| |||| || || || |||| ||| | ||||| | ||||||| Sbjct 161197 CGTGTACTTGTCTGGGTTCTTCAAGAAATCGACAACTTCTTGGAGTTCCAACTTTGCCTG 161256 Query 289326 ATCACATCCTGCTACATCAGCAAAAGTAA 289354 ||| ||| || || |||||||| |||| Sbjct 161257 GTCAGCTCCAGCAACGTCAGCAAAGGTAA 161285 >seq12488 Length=195766 Score = 105 bits (116), Expect = 2e-17 Identities = 271/407 (67%), Gaps = 7/407 (2%) Strand=Plus/Plus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 |||||||||||| | || | ||||||||||| ||||| |||||||| ||| Sbjct 101526 AAATCCATCCATTTCTACTAGCAACTGATTAAGTGTACTTTCCCGCTCATCATTGCCACC 101585 Query 288999 TCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058 ||| || | | |||| | |||| | ||||||||||| |||||||| | Sbjct 101586 A---GAAAAGCCTCCACGACCCCTTGCTCTACCTATTGCATCAATTTCATCAATGAATAC 101642 Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAG 289118 | || |||| | || || || | |||||| ||| || | |||| |||| Sbjct 101643 AATACTAGGAGCACACTGCCTAGCCTCTTGAAATAAGCTTCTCACTCTTGATGGCCCAAC 101702 Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTT 289177 |||||| ||||||| | ||| || || | || | | || | ||| | ||| | || Sbjct 101703 TCCAACAAACATTTCCATAAAATCGGATCCAGACA-TAGAGAGGAAAGGCACACCAGATT 101761 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | || || |||| |||| ||||||||||| ||||| ||||| || || | | || Sbjct 101762 CACCAGCAGTTGCCTTCGCAAGAAGTGTCTTCCCTGTGCCAGGAGGACCGACAAGAAGTG 101821 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTT-ATATTTCTCAGGGCTCTTTAAAAATTCT 289296 | || | || | || || || | ||| |||||||| ||| ||||||| || | Sbjct 101822 CACCTCTGGGAATCTTAGCTCCTA-ATTCTTCATATTTCTTTGGGTTCTTTAAGAAGTGC 101880 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| ||| || ||| | ||||||||||||||||| || ||||| Sbjct 101881 ACAAACTCCATAATTTCTTGCTTTGCCTCATCACATCCAGCAACATC 101927 >seq27182 Length=171535 Score = 104 bits (114), Expect = 7e-17 Identities = 314/474 (66%), Gaps = 26/474 (5%) Strand=Plus/Plus Query 288889 ATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTG---CTTAAATCCA 288945 || || |||||||| |||||||| | ||| | ||| |||| | || || ||| Sbjct 138815 ATGTCAGCTCTGTTAGTTGCTGCAATTACGATGATAC---CGGTGTTACCCTCGAAACCA 138871 Query 288946 TCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAA 289005 ||||| || |||| || ||||| ||||| || || |||||||| |||| Sbjct 138872 TCCATTTCGGTCAAAAGCTGGTTAAGAGTTTGCTCTCTCTCATCATTC---CCTC----- 138923 Query 289006 TCACCCGAATC-GCTCCtttttttA--CCAACAGCATCAATTTCGTCAATGAAAATCACA 289062 |||| | | | |||| ||| | ||||| ||||||||||| || | || | | | Sbjct 138924 -CACCAATACCAGTTCCTCTTTGTCGTCCAACGGCATCAATTTCATCCACAAAGACGATA 138982 Query 289063 CACGGAGAATTTTGTCTCGC--AATTGCAAATAATTCTCTTACACGGGATGCTCCAAGAC 289120 || || | ||| | | || ||| ||| | || | || || || || |||| || Sbjct 138983 CAGGGGGCATTCTCCTTGGCCTTCTTGAAAAGA--TCACGAACTCGAGAAGCACCAACAC 139040 Query 289121 CAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTTCG 289179 ||||| ||||||| ||||| || ||| | || | | || | ||| | ||| ||||| Sbjct 139041 CAACAAACATTTCAACAAACTCGGAACCTGA-AATGGAGAAGAACGGCACACCAGCTTCA 139099 Query 289180 CCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACT 289239 || || | |||| | || ||||| ||||| || |||||||| || || | ||||| Sbjct 139100 CCAGCAATTGCCTTAGCAAGAAGAGTCTTTCCGGTTCCAGGAGGGCCAATGAGAAGAACA 139159 Query 289240 CCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTACA 289299 || || || | ||||| | | || || | || || ||||||| || || ||| Sbjct 139160 CCTTTAGGGATACGAGCCCCGACCGCGGTAAATCTTTCTGGCTTCTTTAAGAACTCAACA 139219 Query 289300 ATTTCC-TCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAAAAGT 289352 | ||| | ||| || | ||||| |||||| ||| || |||||| |||| || Sbjct 139220 ACCTCCATGAAG-TCCTGCTTTGCTTCATCAACTCCAGCAACATCATCAAATGT 139272 >seq21348 Length=86103 Score = 104 bits (114), Expect = 7e-17 Identities = 272/408 (67%), Gaps = 9/408 (2%) Strand=Plus/Plus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 |||||||||||| | || | ||||||||| || ||| | |||||||| ||||| Sbjct 52133 AAATCCATCCATTTCTACTAGCAATTGATTAAGCGTACTTTCACGCTCATCATTAGAACC 52192 Query 288999 TCTTGAATCACC-CGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAA 289057 | || | || ||| | ||| | ||||| |||||||| || || || || | Sbjct 52193 TGAGAAACCTCCACGA----CCTCTTGCTCGACCAATTGCATCAATCTCATCGATAAATA 52248 Query 289058 TCACACACGGAGAATTTTGTCTCGC-AATTGCAAATAATTCTCTTACACGGGATGCTCCA 289116 | | || |||| | || || || ||| || ||||| || || | ||||| |||| Sbjct 52249 TTATACTAGGAGCACACTGCCTTGCTTCTTGGAACAAATTC-CTCACCCTGGATGGTCCA 52307 Query 289117 AGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGC 289175 | ||||||| |||| || | || |||||| | |||| |||| | ||| | |||| || Sbjct 52308 ACACCAACAAACATCTCCATGAAATCAGAACCTGATA-TTGATAGGAAAGGTACACCTGA 52366 Query 289176 TTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAG 289235 || || || ||| | || || || ||||| || || || || || ||| | | || Sbjct 52367 CTCACCGGCAGTTGCTTTTGCTAGGAGAGTCTTTCCCGTACCTGGAGGACCCACCAGCAG 52426 Query 289236 AACTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTC 289295 | | || ||||| | ||| || || || |||||||| ||| |||| | || | Sbjct 52427 AGCACCTTTTGGAATTTTAGCTCCTAGGTCCTCATATTTCTTTGGGTTCTTAAGGAAGTG 52486 Query 289296 TACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| |||| | || | ||| |||||||| || || || ||||| Sbjct 52487 CACAAATTCCATGATCTCTTGTTTAGCCTCATCGCAGCCAGCAACATC 52534 >seq16259 Length=81889 Score = 102 bits (112), Expect = 2e-16 Identities = 334/509 (66%), Gaps = 20/509 (4%) Strand=Plus/Plus Query 288853 TCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCC 288912 ||||||||||| | | ||| || | || | | ||||| ||||| ||||||||| Sbjct 33708 TCAAACCTACCGGGCCTCAATAAAGCCGCATCAAGAACATCGGGCCTGTTAGTTGCTGCC 33767 Query 288913 AATACAACAATAGATTCGGTTTGCTT---AAATCCATCCATACTTGTTAAAATTTGATTA 288969 || |||| | | ||| | | |||||||||||| || | | ||||| Sbjct 33768 AAAACAATGACAC---CGGAATTCCCCGAAAATCCATCCATCTCAGTCAGCAACTGATTG 33824 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttA 289029 | ||| || || |||||||||||| |||| | | | || | |||||| | | | Sbjct 33825 ATTGTCTGCTCTCTTTCATCATTT---CCTCCTCCA--AGCCCA---GCTCCTCTCTGTC 33876 Query 289030 --CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 ||||||||||| || || || ||||| | | || || | || | | || || Sbjct 33877 TCCCAACAGCATCGATCTCATCTATGAATACAATCCAAGGCGCTTTGGATTTTGCCTTTT 33936 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 |||| || || ||||| | ||| | || | ||||| ||| || ||||| || |||| Sbjct 33937 CAAACAAATCCCTTACCCTGGACGTGCCTACTCCAACGAACAACTCCACAAACTCCGAAG 33996 Query 289148 CGGATACTTGA-ATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTC 289206 | | | ||| | || | || ||||| ||||| || | ||||||| | || Sbjct 33997 CTG-CGCATGAGAAAAAGGGCACCCCGGCTTCCCCTGCCACGGATCTCGCCAATGGAGTT 34055 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTT-GGTACTTTTGCCCCAGCAGA 289265 || || || ||||| || || |||||| ||| ||||| || | ||| || || || Sbjct 34056 TTTCCGGTACCAGGAGGGCCAACTAATA-AACAACCTTTCGGGATTTTAGCTCCTAAAGC 34114 Query 289266 CTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 | | || || || ||| |||| || || || |||| ||| | ||||| | ||||||| Sbjct 34115 CGTGTACTTGTCTGGGTTCTTCAAGAAATCGACAACTTCTTGGAGTTCCAACTTTGCCTG 34174 Query 289326 ATCACATCCTGCTACATCAGCAAAAGTAA 289354 ||| ||| || || |||||||| |||| Sbjct 34175 GTCAGCTCCAGCAACGTCAGCAAAGGTAA 34203 >seq21511 Length=123759 Score = 98.7 bits (108), Expect = 3e-15 Identities = 267/406 (66%), Gaps = 6/406 (1%) Strand=Plus/Minus Query 288938 TAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAAC 288997 |||| |||||||| || || | ||||| | ||||| |||||||||||||| | Sbjct 121672 TAAAACCATCCATTTCAGTCAACAGCTGATTCAAAGTTTGCTCCCTTTCATCATTCCCTC 121613 Query 288998 CTCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAA 289057 | | |||| | | | ||| | | || |||||||||||||| || || ||||| | Sbjct 121612 CACC--AATCCC---AGTTCCTCTCTGTCTT-CCAACAGCATCAATCTCATCGATGAACA 121559 Query 289058 TCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAA 289117 || ||| || ||||| | || | ||| | || || || | ||| ||||||| Sbjct 121558 CCAAACATGGGGAATTAGCCTTTGCCTTGTTAAACAGGTCCCTAACTCTGGAAGCTCCAA 121499 Query 289118 GACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTT 289177 |||||| |||| || | || || ||| | || | || ||| | || ||||| Sbjct 121498 CGCCAACAAACATCTCGATGAACTCTGAACCAGAAAGGGAAAAGAAAGGAACCCCTGCTT 121439 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | ||||| | ||| | ||||| | ||||||||| || || || ||||| || || | Sbjct 121438 CCCCTGCAATGGCCTTGGCCAGCAATGTCTTACCAGTCCCTGGAGGTCCAATTAGAAGCA 121379 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTTATATTTCTCAGGGCTCTTTAAAAATTCTA 289297 |||| || || | | | || ||| | | |||| || ||| | ||||| || || | Sbjct 121378 CTCCTTTGGGAATTGTGGCACCAATTGCTGCAAATTTTTCTGGGGTTTTTAAGAACTCCA 121319 Query 289298 CAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | | || | || || | || || |||||| || |||||||| Sbjct 121318 CTACCTCTTGAAAATCTTGCTTGGCTTCATCAATACCAGCTACATC 121273 >seq2295 Length=386087 Score = 98.7 bits (108), Expect = 3e-15 Identities = 164/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 ||| || ||||| ||||| |||||| | |||| ||| | ||||| ||| | | Sbjct 23588 ACAAACGTGGACTCTGTATGCATCACTTTGGTCAAATAATCTTTCCTTGAGGAAATGGGC 23529 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||||| |||| |||||| ||||| || ||||| || || ||||||||||||||||| || Sbjct 23528 AGCACCATGTGCAATCATGCAATCTCGTTCCATCTCTCCAAAACGAAGACCACCATCACG 23469 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | ||||| ||||| || | || ||| | | |||||| || ||| Sbjct 23468 AGAACGTCCCTCTGCAGGTTGCCTCGTTAGAATTTGAACAGGACCCCGACCACGTGAATG 23409 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 ||||| | ||||||||||| || || ||||| ||| ||| || | ||| || Sbjct 23408 GATTTTATCGTCGACCATATGCTTTAGTCGTTGGTAATATGTGGGTCCCAAGAATAT 23352 Score = 95.1 bits (104), Expect = 4e-14 Identities = 163/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 ||| || ||||| ||||| |||||| | |||| ||| | ||||| ||| | | Sbjct 12606 ACAAACGTGGACTCTGTATGCATCACTTTGGTCAAATAATCTTTCCTTGAGGAAATGGGC 12547 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||||| |||| |||||| ||||| || ||||| || || ||||||||||||||||| || Sbjct 12546 AGCACCATGTGCAATCATGCAATCTCGTTCCATCTCTCCAAAACGAAGACCACCATCACG 12487 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | ||||| ||||| || | || ||| | | |||||| || ||| Sbjct 12486 AGAACGTCCCTCTGCAGGTTGCCTCGTTAGAATTTGAACAGGACCCCGACCACGTGAATG 12427 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 |||||| | ||||| ||||| || || ||||| | | ||| || | ||| || Sbjct 12426 GATCTTATCGTCGACCATGTGCTTTAGTCGTTGGTAATACGTGGGTCCCAAGAATAT 12370 Score = 84.2 bits (92), Expect = 6e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 233272 AGCACCGTGAGCAATCATACAATCACGTTCCATTTCACCAATACGCAGACCACCATCATT 233331 |||||| || |||||||| ||||| |||||||| || |||| ||| |||||||||||| Sbjct 23528 AGCACCATGTGCAATCATGCAATCTCGTTCCATCTCTCCAAAACGAAGACCACCATCACG 23469 Query 233332 TGACCTACCCTGGACTGTTTGACGAGTTAAAACAGTTCTTGGACCCTGAGCACGATAATT 233391 || | |||| | | ||| | |||| || |||||| || |||| ||| Sbjct 23468 AGAACGTCCCTCTGCAGGTTGCCTCGTTAGAATTTGAACAGGACCCCGACCACGTGAATG 23409 Query 233392 AATTTTATCTTTAACCATATGCTTCAGTC 233420 |||||||| | ||||||||||| |||| Sbjct 23408 GATTTTATCGTCGACCATATGCTTTAGTC 23380 >seq1041 Length=88306 Score = 96.9 bits (106), Expect = 1e-14 Identities = 269/407 (66%), Gaps = 7/407 (2%) Strand=Plus/Minus Query 288939 AAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACC 288998 |||||||||||| | || | ||||||||||| ||||| |||||||| ||| Sbjct 42633 AAATCCATCCATTTCTACTAGCAACTGATTAAGTGTACTTTCCCGCTCATCATTGCCACC 42574 Query 288999 TCTTGAATCACCCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAAT 289058 ||| || | | |||| | |||| | ||||||||||| |||||||| | Sbjct 42573 A---GAAAAGCCTCCACGACCCCTTGCTCTACCTATTGCATCAATTTCATCAATGAATAC 42517 Query 289059 CACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAG 289118 | || |||| | || || || | |||||| ||| || | || | |||| Sbjct 42516 AATACTAGGAGCACACTGCCTAGCCTCTTGAAATAAGCTTCTCACTCTTGACGGCCCAAC 42457 Query 289119 ACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGA-ATGAATGTTACATTTGCTT 289177 |||||| ||||||| | ||| || || | || | | || | ||| | ||| | || Sbjct 42456 TCCAACAAACATTTCCATAAAATCTGATCCAGACA-TAGAGAGGAAAGGCACACCAGATT 42398 Query 289178 CGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAA 289237 | || || |||| | || ||||||||||| ||||| ||||| || || | | ||| Sbjct 42397 CACCAGCAGTTGCCTTTGCAAGAAGTGTCTTCCCTGTGCCAGGAGGACCAACAAGAAGAG 42338 Query 289238 CTCCCTTTGGTACTTTTGCCCCAGCAGACTTA-TATTTCTCAGGGCTCTTTAAAAATTCT 289296 | || | || | || || || | ||| ||||||| ||| ||||||| || | Sbjct 42337 CACCTCTGGGAATCTTAGCTCCTA-ATTCTTCGTATTTCTTTGGGTTCTTTAAGAAGTGC 42279 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||| ||| || ||| | ||||||||||||||||| || ||||| Sbjct 42278 ACAAACTCCATAATTTCTTGCTTTGCCTCATCACATCCAGCAACATC 42232 >seq4101 Length=384191 Score = 95.1 bits (104), Expect = 4e-14 Identities = 163/237 (69%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 251424 ACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGA 251483 ||| || ||||| ||||| |||||| | |||| ||| | ||||| ||| | | Sbjct 66317 ACAAACGTGGACTCTGTATGCATCACTTTGGTCAAATAATCTTTCCTTGAGGAAATGGGC 66258 Query 251484 TGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCG 251543 ||||| |||| |||||| ||||| || ||||| || || ||||||||||||||||| || Sbjct 66257 AGCACCATGTGCAATCATGCAATCTCGTTCCATCTCTCCAAAACGAAGACCACCATCACG 66198 Query 251544 AGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATG 251603 || | ||||| ||||| || | || ||| | | |||||| || ||| Sbjct 66197 AGAACGTCCCTCTGCAGGTTGCCTCGTTAGAATTTGAACAGGACCCCGACCACGTGAATG 66138 Query 251604 TTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGAT 251660 |||||| | ||||| ||||| || || ||||| | | ||| || | ||| || Sbjct 66137 GATCTTATCGTCGACCATGTGCTTTAGTCGTTGGTAATACGTGGGTCCCAAGAATAT 66081 >seq22013 Length=302264 Score = 84.2 bits (92), Expect = 6e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 408951 TAACTCAGTTGGTTAGAGTGTCGGTCTTATGAGCCGAAAGTCGTGGGTTCGAGTCCCACA 409010 || ||||||||||||||| || |||||||||||||||| |||| ||||||||| ||| | Sbjct 78400 TAGCTCAGTTGGTTAGAGCGTTGGTCTTATGAGCCGAAGGTCGCGGGTTCGAGCCCCGCC 78341 Query 409011 TAGAACAttttttt 409024 || ||||||||| Sbjct 78340 GGGACCATTTTTTT 78327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471256565668087