Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq22586 168 9e-37
seq29212 167 3e-36
seq12755 140 4e-28
seq19704 138 2e-27
seq28581 131 2e-25
seq25332 129 8e-25
seq8664 104 3e-17
seq23340 91.5 2e-13
>seq22586
Length=877411
Score = 168 bits (186), Expect = 9e-37
Identities = 560/869 (64%), Gaps = 4/869 (0%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
||||| || || ||||| | ||||||||| ||||| ||||| |||| ||| ||||| |
Sbjct 443527 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 443586
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
||||| ||||||| || || | || || | ||| | ||||| || | |
Sbjct 443587 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 443646
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
|| | ||| || || || || ||||| |||| | || | ||||| || | |
Sbjct 443647 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 443706
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| ||||| || || ||||| | || ||||| || || || ||| ||||
Sbjct 443707 GCGCAGGGCAGAGCATCGCATACGAACTCCCTCTCTATGTCCACCGCGTCCCTTACTATC 443766
Query 39566 GATGTTACTACCTCATCACTCGG--TGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623
| | || || |||||| | | || | | | || || ||||| ||||
Sbjct 443767 CCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCGA 443824
Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683
| ||||| || || || ||||||| ||||| ||||| || || || | ||| ||||
Sbjct 443825 AATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGCA 443884
Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743
||| || | |||||| | ||||||||||||| ||| ||| || || ||||| || |
Sbjct 443885 TTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCCT 443944
Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCT 39803
|||| ||||| || | | | || || || || | | ||||| |||
Sbjct 443945 CTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTCA 444004
Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863
||||| || ||||| || ||||| |||| || || || || || ||| |
Sbjct 444005 TAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGGT 444064
Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923
|||||||| |||||| | || || || | | ||||| ||||| || || ||||
Sbjct 444065 TCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGGA 444124
Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983
| ||||| || || || || || || |||||| | || || | || || ||||||
Sbjct 444125 TATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTCTT 444184
Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043
|| | | || | || ||| ||||| ||||| ||||| ||||| || |
Sbjct 444185 TCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGCGA 444244
Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103
|| || |||| || | | ||||||| || | | | ||||| | | |||
Sbjct 444245 GAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATCGG 444304
Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163
|| | ||| ||||| || || |||||||||||||| || || || |||||||| | ||
Sbjct 444305 AAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTCCC 444364
Query 40164 ATATATCACGATATTGTATTGGAAAAATA 40192
||| || | ||||| || ||||| |||
Sbjct 444365 ATACTTCTGGGTATTGGATCGGAAACATA 444393
Score = 168 bits (186), Expect = 9e-37
Identities = 560/869 (64%), Gaps = 4/869 (0%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
||||| || || ||||| | ||||||||| ||||| ||||| |||| ||| ||||| |
Sbjct 446662 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 446721
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
||||| ||||||| || || | || || | ||| | ||||| || | |
Sbjct 446722 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 446781
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
|| | ||| || || || || ||||| |||| | || | ||||| || | |
Sbjct 446782 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 446841
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| ||||| || || ||||| | || ||||| || || || ||| ||||
Sbjct 446842 GCGCAGGGCAGAGCATCGCATACGAACTCCCTCTCTATGTCCACCGCGTCCCTTACTATC 446901
Query 39566 GATGTTACTACCTCATCACTCGG--TGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623
| | || || |||||| | | || | | | || || ||||| ||||
Sbjct 446902 CCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCGA 446959
Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683
| ||||| || || || ||||||| ||||| ||||| || || || | ||| ||||
Sbjct 446960 AATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGCA 447019
Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743
||| || | |||||| | ||||||||||||| ||| ||| || || ||||| || |
Sbjct 447020 TTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCCT 447079
Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCT 39803
|||| ||||| || | | | || || || || | | ||||| |||
Sbjct 447080 CTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTCA 447139
Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863
||||| || ||||| || ||||| |||| || || || || || ||| |
Sbjct 447140 TAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGGT 447199
Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923
|||||||| |||||| | || || || | | ||||| ||||| || || ||||
Sbjct 447200 TCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGGA 447259
Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983
| ||||| || || || || || || |||||| | || || | || || ||||||
Sbjct 447260 TATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTCTT 447319
Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043
|| | | || | || ||| ||||| ||||| ||||| ||||| || |
Sbjct 447320 TCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGCGA 447379
Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103
|| || |||| || | | ||||||| || | | | ||||| | | |||
Sbjct 447380 GAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATCGG 447439
Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163
|| | ||| ||||| || || |||||||||||||| || || || |||||||| | ||
Sbjct 447440 AAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTCCC 447499
Query 40164 ATATATCACGATATTGTATTGGAAAAATA 40192
||| || | ||||| || ||||| |||
Sbjct 447500 ATACTTCTGGGTATTGGATCGGAAACATA 447528
>seq29212
Length=358297
Score = 167 bits (184), Expect = 3e-36
Identities = 559/869 (64%), Gaps = 6/869 (1%)
Strand=Plus/Minus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| || || || ||||| | |||||||| ||||| ||||| |||| |||||| || |
Sbjct 223514 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 223455
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
||||| ||||||| || |||| ||||| || |||| | | ||||| || | |
Sbjct 223454 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 223395
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505
|| | ||| ||||| || || |||||| |||||| |||| ||||| || | |
Sbjct 223394 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCGTTCATCCCAACTAAC 223335
Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565
|| ||||| || || |||||| | || || || || || || | | |||
Sbjct 223334 GCGCAGGGAAGAGCGTCGCATACAAACTCCCTCTCTATATCCACCGCATCCCTCACTATT 223275
Query 39566 GATGTTACTACCTCATCACTCGG---TGGATGCAATAAATGTTTAAACATTAAGCAGGCG 39622
| || ||| ||||| | || || | | | | ||| ||||| ||
Sbjct 223274 CCCTTCACGCGCTCTTCACTTAGCTTTGACTGGAGGAGAGAGT---ACAGCAAGCAAGCA 223218
Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682
||||| ||||| || || ||||||| | || || ||||| || || || | |||||||
Sbjct 223217 AAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCCAGGC 223158
Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742
|||| || |||||||| | ||||||||| ||| ||| || || || || ||||||
Sbjct 223157 ATTAACCCGCGCTTTTTTAACCAAAATATCGCACAGAAACTGCCGGAGAAAAATATGCCT 223098
Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTC 39802
||||| || || || | | | || | || | | | ||||| |||
Sbjct 223097 TCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGCCGCCGTCGATCCATTTC 223038
Query 39803 TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAA 39862
|||||||| ||||| || || || |||| ||||| |||| | |||||
Sbjct 223037 AAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTAGCGTGGAAGAGGCGG 222978
Query 39863 TGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGG 39922
| |||||| |||||||| ||| || || | | ||||||||||| || || |||
Sbjct 222977 TTTTTTTCGGTGGAATCTTTAATATAAGTTTCGAGGAGGAGACTATACATCTCAGAGTGG 222918
Query 39923 ATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982
|| || || || || || || ||||| ||||| | || || | ||||| ||||||
Sbjct 222917 ATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGCGCCTCCGCGATTTGGACCTCT 222858
Query 39983 GAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCC 40042
|| | | || | |||||| || || ||||| ||||| || || ||
Sbjct 222857 TTCATGAAGCGAACAGCGAGATTTTCTAGAACGATGCCATCGGATGCGGCGAAGAAGGCA 222798
Query 40043 AATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCT 40102
| ||||| | || || | ||| |||| | | || | ||||| | |||
Sbjct 222797 AGGACATGACTGATGAAGTGGCGTTCGTCGGCGTTAAGATTTTGCCAGTGTGGAAGATCG 222738
Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162
|| | ||| ||||| || || |||||||| || || || || || || ||||| | |
Sbjct 222737 GAAGAGAGATCAACTTCCTCGGCAGTCCAAAAAGAGGCTTCGGCTTTCTTATACATTTCC 222678
Query 40163 CATATATCACGATATTGTATTGGAAAAAT 40191
||||| | | ||||| ||||| || ||
Sbjct 222677 CATATCTGTGGGTATTGGATTGGGAACAT 222649
>seq12755
Length=243795
Score = 140 bits (154), Expect = 4e-28
Identities = 154/205 (75%), Gaps = 0/205 (0%)
Strand=Plus/Minus
Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809
|||||| ||||| | |||| ||||| | ||| | || | |||||| || | ||| ||
Sbjct 40245 TCCTCCTTGATCAACATATCGAGCAGTATCATTGAACACCCGCAGCATTGGGACAATTCC 40186
Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869
||||||| |||||||||||||| ||||||||| ||| | || |||||||| || |||
Sbjct 40185 ATTAGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGA 40126
Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929
| ||| |||||||| || ||| ||| | |||||| ||||| || ||||||||
Sbjct 40125 AACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATAT 40066
Query 69930 ACCCTCTATGCTATCATCTATCATG 69954
|| || || ||||||||| |||||
Sbjct 40065 TCCTTCAATACTATCATCTTTCATG 40041
Score = 91.5 bits (100), Expect = 2e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049
||| || ||||| || | || ||||| || |||||||||||| ||| ||| | || |
Sbjct 39902 AGTGCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 39843
Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109
|| |||| ||||| || || || || || ||||||||| | || || | ||| ||
Sbjct 39842 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 39783
Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169
|||||||||||| | ||||| || | | |||||| || || || | |||||
Sbjct 39782 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 39723
Query 70170 AGTTTTAAACCCAAAATA 70187
||||| || ||||| ||
Sbjct 39722 GGTTTTGAAGCCAAAGTA 39705
Score = 91.5 bits (100), Expect = 2e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 68734 AACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGA 68793
|| ||||| ||| | |||||||| ||||||||| || | |||||||||| || |||
Sbjct 42223 AAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAGA 42164
Query 68794 ATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCAT 68851
|| ||| |||||| ||||||||||||||||| | ||||| |||||| | ||||
Sbjct 42163 ATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT 42106
Score = 86.0 bits (94), Expect = 9e-12
Identities = 113/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548
|||||||||||| || |||| ||| ||| ||||| || |||||| ||| ||| ||
Sbjct 40715 CTCTTTTTCATAATGAATATACAGCTTTTCAAATTCTTCACCCCAACAATCTGCCAGGCC 40656
Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608
|||| ||||| ||||| | ||||||||| ||| | | ||| | || ||||||
Sbjct 40655 AGGAGCCTCATTAGGACAGAACAATGACCATTGGCCATTACTTTGAACCCTTTGCATAAA 40596
Query 69609 TAGATCGGGAATCCAAAGAGCTATA-AAGAGATC 69641
||||| || | ||||||||| ||| || |||||
Sbjct 40595 AAGATCAGGCACCCAAAGAGC-ATAGAATAGATC 40563
>seq19704
Length=164701
Score = 138 bits (152), Expect = 2e-27
Identities = 163/221 (74%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810
||||| ||||| | || | ||||||| ||| | || | |||||| || | ||| |||
Sbjct 135825 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 135766
Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870
|||||| |||||||||||||| ||| ||||| | | | || |||||||| || ||
Sbjct 135765 TTAGATGTACCATTTGTTCCATGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 135706
Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930
| ||| |||||||| || ||| ||||| |||||| ||||| |||||||||||
Sbjct 135705 ACACCAATTCCTCCAGCTGATTTGCTGATTATAGCACACTCCTTCAAAGTGTCATATATT 135646
Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971
||||| || ||||||||| |||| || | ||| |||||
Sbjct 135645 CCCTCAATACTATCATCTTTCATACACAGTAAAAAGCAGCT 135605
Score = 95.1 bits (104), Expect = 2e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 68737 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATT 68796
||||||||| | || ||||| ||||||||||| | | ||||||||||| |||||
Sbjct 137785 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 137726
Query 68797 TGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTT 68856
|| |||||||||||||||||||||||| | ||| | |||||| | ||||| |
Sbjct 137725 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 137666
Query 68857 ATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGAT 68893
|| || ||| | ||| ||||| ||||| ||||
Sbjct 137665 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCACAGAT 137629
>seq28581
Length=397638
Score = 131 bits (144), Expect = 2e-25
Identities = 289/427 (68%), Gaps = 10/427 (2%)
Strand=Plus/Plus
Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385
|| || || || ||||| | |||||||| ||||| ||||| |||| |||||| || |
Sbjct 33792 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 33851
Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445
||||| ||||||| || |||| ||||| || |||| | | ||||| || | |
Sbjct 33852 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 33911
Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGA-- 39503
|| | ||| ||||| || || |||||| |||||| |||| |||||| || | |
Sbjct 33912 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCATTCATCCCAACTAAC 33971
Query 39504 GTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTA 39563
| || || ||||| || || |||||| | || || | || || || | | ||
Sbjct 33972 GCGCAA--GGAAGAGCGTCGCATACAAACTCCCTCTCTATATACACCGCATCACTCACTA 34029
Query 39564 TCGATGTTACTACCTCATCACTCGG--TGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621
| | || ||| ||||| | | || || | | || || ||||| ||
Sbjct 34030 TTCCCTTCACGCGCTCTTCACTTAGCTTTGACTGAAGGAGAGAGTA--CAGCAAGCAAGC 34087
Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681
||||| ||||| || || ||||||| | || || ||||| || || || | ||||||
Sbjct 34088 AAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCCAGG 34147
Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGAAGATGC 39740
||||| || |||||||| | ||||||||| || ||| ||| || || || || ||||
Sbjct 34148 CATTAACCCGCGCTTTTTTAACCAAAATATCGC-GCAGAAACTGCCGGAGAAAAATATGC 34206
Query 39741 CTTCTAC 39747
|||||||
Sbjct 34207 CTTCTAC 34213
>seq25332
Length=434290
Score = 129 bits (142), Expect = 8e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810
||||| ||||| | || | ||||||| ||| | || | |||||| || | ||| |||
Sbjct 185398 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 185457
Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870
|||||| |||||||||||||| ||| ||||| | | | || |||||||| || ||
Sbjct 185458 TTAGATGTACCATTTGTTCCACGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 185517
Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930
| ||| |||||||| || ||| ||| | |||||| ||||| |||||||||||
Sbjct 185518 ACACCAATTCCTCCAGCTGATTTGCTGATAATAGCACACTCCTTCAAAGTGTCATATATT 185577
Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971
||||| || || |||||| |||| || | ||| |||||
Sbjct 185578 CCCTCAATACTGTCATCTTTCATACACAGTAAAAAGCAGCT 185618
Score = 89.7 bits (98), Expect = 7e-13
Identities = 111/152 (73%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 68737 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATT 68796
||||||||| | || ||||| ||||||||||| | | ||||||||||| |||||
Sbjct 183433 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 183492
Query 68797 TGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTT 68856
|| |||||||||||||||||||||||| | ||| | |||||| | ||||| |
Sbjct 183493 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 183552
Query 68857 ATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888
|| || ||| | ||| ||||| |||||
Sbjct 183553 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCA 183584
>seq8664
Length=49552
Score = 104 bits (114), Expect = 3e-17
Identities = 108/142 (76%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 69813 AGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAG 69872
|||| |||||||||||||| ||||||||| ||| | || |||||||| || ||| |
Sbjct 45178 AGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGAAAC 45119
Query 69873 ACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACC 69932
||| |||||||| || ||| ||| | |||||| ||||| || |||||||| ||
Sbjct 45118 ACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATATTCC 45059
Query 69933 CTCTATGCTATCATCTATCATG 69954
|| || ||||||||| |||||
Sbjct 45058 TTCAATACTATCATCTTTCATG 45037
Score = 91.5 bits (100), Expect = 2e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049
||| || ||||| || | || ||||| || |||||||||||| ||| ||| | || |
Sbjct 44898 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 44839
Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109
|| |||| ||||| || || || || || ||||||||| | || || | ||| ||
Sbjct 44838 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 44779
Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169
|||||||||||| | ||||| || | | |||||| || || || | |||||
Sbjct 44778 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 44719
Query 70170 AGTTTTAAACCCAAAATA 70187
||||| || ||||| ||
Sbjct 44718 GGTTTTGAAGCCAAAGTA 44701
Score = 91.5 bits (100), Expect = 2e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049
||| || ||||| || | || ||||| || |||||||||||| ||| ||| | || |
Sbjct 49323 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 49264
Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109
|| |||| ||||| || || || || || ||||||||| | || || | ||| ||
Sbjct 49263 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 49204
Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169
||| |||||||| | ||||| || | | |||||| || || || | |||||
Sbjct 49203 CATGTGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 49144
Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTC 70202
||||| || ||||| || | ||| ||||||
Sbjct 49143 GGTTTTGAAGCCAAAGTAATCGTAGTCAAAGTC 49111
>seq23340
Length=555426
Score = 91.5 bits (100), Expect = 2e-13
Identities = 91/118 (77%), Gaps = 0/118 (0%)
Strand=Plus/Minus
Query 68734 AACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGA 68793
|| ||||| ||| | |||||||| ||||||||| || | |||||||||| || |||
Sbjct 1845 AAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAGA 1786
Query 68794 ATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCAT 68851
|| ||| |||||| ||||||||||||||||| | ||||| |||||| | ||||
Sbjct 1785 ATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT 1728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686653347203640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |