Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03] 29,751 sequences; 2,566,742,836 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq22586 168 9e-37 seq29212 167 3e-36 seq12755 140 4e-28 seq19704 138 2e-27 seq28581 131 2e-25 seq25332 129 8e-25 seq8664 104 3e-17 seq23340 91.5 2e-13 >seq22586 Length=877411 Score = 168 bits (186), Expect = 9e-37 Identities = 560/869 (64%), Gaps = 4/869 (0%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 ||||| || || ||||| | ||||||||| ||||| ||||| |||| ||| ||||| | Sbjct 443527 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 443586 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| ||||||| || || | || || | ||| | ||||| || | | Sbjct 443587 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 443646 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 || | ||| || || || || ||||| |||| | || | ||||| || | | Sbjct 443647 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 443706 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || ||||| || || ||||| | || ||||| || || || ||| |||| Sbjct 443707 GCGCAGGGCAGAGCATCGCATACGAACTCCCTCTCTATGTCCACCGCGTCCCTTACTATC 443766 Query 39566 GATGTTACTACCTCATCACTCGG--TGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 | | || || |||||| | | || | | | || || ||||| |||| Sbjct 443767 CCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCGA 443824 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 | ||||| || || || ||||||| ||||| ||||| || || || | ||| |||| Sbjct 443825 AATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGCA 443884 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 ||| || | |||||| | ||||||||||||| ||| ||| || || ||||| || | Sbjct 443885 TTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCCT 443944 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCT 39803 |||| ||||| || | | | || || || || | | ||||| ||| Sbjct 443945 CTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTCA 444004 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863 ||||| || ||||| || ||||| |||| || || || || || ||| | Sbjct 444005 TAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGGT 444064 Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923 |||||||| |||||| | || || || | | ||||| ||||| || || |||| Sbjct 444065 TCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGGA 444124 Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983 | ||||| || || || || || || |||||| | || || | || || |||||| Sbjct 444125 TATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTCTT 444184 Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043 || | | || | || ||| ||||| ||||| ||||| ||||| || | Sbjct 444185 TCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGCGA 444244 Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103 || || |||| || | | ||||||| || | | | ||||| | | ||| Sbjct 444245 GAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATCGG 444304 Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163 || | ||| ||||| || || |||||||||||||| || || || |||||||| | || Sbjct 444305 AAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTCCC 444364 Query 40164 ATATATCACGATATTGTATTGGAAAAATA 40192 ||| || | ||||| || ||||| ||| Sbjct 444365 ATACTTCTGGGTATTGGATCGGAAACATA 444393 Score = 168 bits (186), Expect = 9e-37 Identities = 560/869 (64%), Gaps = 4/869 (0%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 ||||| || || ||||| | ||||||||| ||||| ||||| |||| ||| ||||| | Sbjct 446662 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 446721 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| ||||||| || || | || || | ||| | ||||| || | | Sbjct 446722 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 446781 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 || | ||| || || || || ||||| |||| | || | ||||| || | | Sbjct 446782 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 446841 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || ||||| || || ||||| | || ||||| || || || ||| |||| Sbjct 446842 GCGCAGGGCAGAGCATCGCATACGAACTCCCTCTCTATGTCCACCGCGTCCCTTACTATC 446901 Query 39566 GATGTTACTACCTCATCACTCGG--TGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 | | || || |||||| | | || | | | || || ||||| |||| Sbjct 446902 CCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCGA 446959 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 | ||||| || || || ||||||| ||||| ||||| || || || | ||| |||| Sbjct 446960 AATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGCA 447019 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 ||| || | |||||| | ||||||||||||| ||| ||| || || ||||| || | Sbjct 447020 TTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCCT 447079 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCT 39803 |||| ||||| || | | | || || || || | | ||||| ||| Sbjct 447080 CTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTCA 447139 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863 ||||| || ||||| || ||||| |||| || || || || || ||| | Sbjct 447140 TAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGGT 447199 Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923 |||||||| |||||| | || || || | | ||||| ||||| || || |||| Sbjct 447200 TCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGGA 447259 Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983 | ||||| || || || || || || |||||| | || || | || || |||||| Sbjct 447260 TATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTCTT 447319 Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043 || | | || | || ||| ||||| ||||| ||||| ||||| || | Sbjct 447320 TCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGCGA 447379 Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103 || || |||| || | | ||||||| || | | | ||||| | | ||| Sbjct 447380 GAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATCGG 447439 Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163 || | ||| ||||| || || |||||||||||||| || || || |||||||| | || Sbjct 447440 AAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTCCC 447499 Query 40164 ATATATCACGATATTGTATTGGAAAAATA 40192 ||| || | ||||| || ||||| ||| Sbjct 447500 ATACTTCTGGGTATTGGATCGGAAACATA 447528 >seq29212 Length=358297 Score = 167 bits (184), Expect = 3e-36 Identities = 559/869 (64%), Gaps = 6/869 (1%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || || || || ||||| | |||||||| ||||| ||||| |||| |||||| || | Sbjct 223514 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 223455 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| ||||||| || |||| ||||| || |||| | | ||||| || | | Sbjct 223454 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 223395 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 || | ||| ||||| || || |||||| |||||| |||| ||||| || | | Sbjct 223394 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCGTTCATCCCAACTAAC 223335 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || ||||| || || |||||| | || || || || || || | | ||| Sbjct 223334 GCGCAGGGAAGAGCGTCGCATACAAACTCCCTCTCTATATCCACCGCATCCCTCACTATT 223275 Query 39566 GATGTTACTACCTCATCACTCGG---TGGATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 | || ||| ||||| | || || | | | | ||| ||||| || Sbjct 223274 CCCTTCACGCGCTCTTCACTTAGCTTTGACTGGAGGAGAGAGT---ACAGCAAGCAAGCA 223218 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 ||||| ||||| || || ||||||| | || || ||||| || || || | ||||||| Sbjct 223217 AAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCCAGGC 223158 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 |||| || |||||||| | ||||||||| ||| ||| || || || || |||||| Sbjct 223157 ATTAACCCGCGCTTTTTTAACCAAAATATCGCACAGAAACTGCCGGAGAAAAATATGCCT 223098 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTC 39802 ||||| || || || | | | || | || | | | ||||| ||| Sbjct 223097 TCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGCCGCCGTCGATCCATTTC 223038 Query 39803 TGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAA 39862 |||||||| ||||| || || || |||| ||||| |||| | ||||| Sbjct 223037 AAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTAGCGTGGAAGAGGCGG 222978 Query 39863 TGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGG 39922 | |||||| |||||||| ||| || || | | ||||||||||| || || ||| Sbjct 222977 TTTTTTTCGGTGGAATCTTTAATATAAGTTTCGAGGAGGAGACTATACATCTCAGAGTGG 222918 Query 39923 ATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCT 39982 || || || || || || || ||||| ||||| | || || | ||||| |||||| Sbjct 222917 ATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGCGCCTCCGCGATTTGGACCTCT 222858 Query 39983 GAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCC 40042 || | | || | |||||| || || ||||| ||||| || || || Sbjct 222857 TTCATGAAGCGAACAGCGAGATTTTCTAGAACGATGCCATCGGATGCGGCGAAGAAGGCA 222798 Query 40043 AATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCT 40102 | ||||| | || || | ||| |||| | | || | ||||| | ||| Sbjct 222797 AGGACATGACTGATGAAGTGGCGTTCGTCGGCGTTAAGATTTTGCCAGTGTGGAAGATCG 222738 Query 40103 TTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTC 40162 || | ||| ||||| || || |||||||| || || || || || || ||||| | | Sbjct 222737 GAAGAGAGATCAACTTCCTCGGCAGTCCAAAAAGAGGCTTCGGCTTTCTTATACATTTCC 222678 Query 40163 CATATATCACGATATTGTATTGGAAAAAT 40191 ||||| | | ||||| ||||| || || Sbjct 222677 CATATCTGTGGGTATTGGATTGGGAACAT 222649 >seq12755 Length=243795 Score = 140 bits (154), Expect = 4e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 |||||| ||||| | |||| ||||| | ||| | || | |||||| || | ||| || Sbjct 40245 TCCTCCTTGATCAACATATCGAGCAGTATCATTGAACACCCGCAGCATTGGGACAATTCC 40186 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||||||| |||||||||||||| ||||||||| ||| | || |||||||| || ||| Sbjct 40185 ATTAGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGA 40126 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| |||||||| || ||| ||| | |||||| ||||| || |||||||| Sbjct 40125 AACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATAT 40066 Query 69930 ACCCTCTATGCTATCATCTATCATG 69954 || || || ||||||||| ||||| Sbjct 40065 TCCTTCAATACTATCATCTTTCATG 40041 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 ||| || ||||| || | || ||||| || |||||||||||| ||| ||| | || | Sbjct 39902 AGTGCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 39843 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 || |||| ||||| || || || || || ||||||||| | || || | ||| || Sbjct 39842 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 39783 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 |||||||||||| | ||||| || | | |||||| || || || | ||||| Sbjct 39782 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 39723 Query 70170 AGTTTTAAACCCAAAATA 70187 ||||| || ||||| || Sbjct 39722 GGTTTTGAAGCCAAAGTA 39705 Score = 91.5 bits (100), Expect = 2e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 68734 AACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGA 68793 || ||||| ||| | |||||||| ||||||||| || | |||||||||| || ||| Sbjct 42223 AAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAGA 42164 Query 68794 ATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCAT 68851 || ||| |||||| ||||||||||||||||| | ||||| |||||| | |||| Sbjct 42163 ATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT 42106 Score = 86.0 bits (94), Expect = 9e-12 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 69489 CTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCC 69548 |||||||||||| || |||| ||| ||| ||||| || |||||| ||| ||| || Sbjct 40715 CTCTTTTTCATAATGAATATACAGCTTTTCAAATTCTTCACCCCAACAATCTGCCAGGCC 40656 Query 69549 AGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAA 69608 |||| ||||| ||||| | ||||||||| ||| | | ||| | || |||||| Sbjct 40655 AGGAGCCTCATTAGGACAGAACAATGACCATTGGCCATTACTTTGAACCCTTTGCATAAA 40596 Query 69609 TAGATCGGGAATCCAAAGAGCTATA-AAGAGATC 69641 ||||| || | ||||||||| ||| || ||||| Sbjct 40595 AAGATCAGGCACCCAAAGAGC-ATAGAATAGATC 40563 >seq19704 Length=164701 Score = 138 bits (152), Expect = 2e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 ||||| ||||| | || | ||||||| ||| | || | |||||| || | ||| ||| Sbjct 135825 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 135766 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 |||||| |||||||||||||| ||| ||||| | | | || |||||||| || || Sbjct 135765 TTAGATGTACCATTTGTTCCATGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 135706 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| |||||||| || ||| ||||| |||||| ||||| ||||||||||| Sbjct 135705 ACACCAATTCCTCCAGCTGATTTGCTGATTATAGCACACTCCTTCAAAGTGTCATATATT 135646 Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971 ||||| || ||||||||| |||| || | ||| ||||| Sbjct 135645 CCCTCAATACTATCATCTTTCATACACAGTAAAAAGCAGCT 135605 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 68737 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATT 68796 ||||||||| | || ||||| ||||||||||| | | ||||||||||| ||||| Sbjct 137785 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 137726 Query 68797 TGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTT 68856 || |||||||||||||||||||||||| | ||| | |||||| | ||||| | Sbjct 137725 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 137666 Query 68857 ATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGAT 68893 || || ||| | ||| ||||| ||||| |||| Sbjct 137665 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCACAGAT 137629 >seq28581 Length=397638 Score = 131 bits (144), Expect = 2e-25 Identities = 289/427 (68%), Gaps = 10/427 (2%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 || || || || ||||| | |||||||| ||||| ||||| |||| |||||| || | Sbjct 33792 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 33851 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| ||||||| || |||| ||||| || |||| | | ||||| || | | Sbjct 33852 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 33911 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGA-- 39503 || | ||| ||||| || || |||||| |||||| |||| |||||| || | | Sbjct 33912 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCATTCATCCCAACTAAC 33971 Query 39504 GTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTA 39563 | || || ||||| || || |||||| | || || | || || || | | || Sbjct 33972 GCGCAA--GGAAGAGCGTCGCATACAAACTCCCTCTCTATATACACCGCATCACTCACTA 34029 Query 39564 TCGATGTTACTACCTCATCACTCGG--TGGATGCAATAAATGTTTAAACATTAAGCAGGC 39621 | | || ||| ||||| | | || || | | || || ||||| || Sbjct 34030 TTCCCTTCACGCGCTCTTCACTTAGCTTTGACTGAAGGAGAGAGTA--CAGCAAGCAAGC 34087 Query 39622 GAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGG 39681 ||||| ||||| || || ||||||| | || || ||||| || || || | |||||| Sbjct 34088 AAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCCAGG 34147 Query 39682 CATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAAGAAGATGC 39740 ||||| || |||||||| | ||||||||| || ||| ||| || || || || |||| Sbjct 34148 CATTAACCCGCGCTTTTTTAACCAAAATATCGC-GCAGAAACTGCCGGAGAAAAATATGC 34206 Query 39741 CTTCTAC 39747 ||||||| Sbjct 34207 CTTCTAC 34213 >seq25332 Length=434290 Score = 129 bits (142), Expect = 8e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 ||||| ||||| | || | ||||||| ||| | || | |||||| || | ||| ||| Sbjct 185398 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 185457 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 |||||| |||||||||||||| ||| ||||| | | | || |||||||| || || Sbjct 185458 TTAGATGTACCATTTGTTCCACGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 185517 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| |||||||| || ||| ||| | |||||| ||||| ||||||||||| Sbjct 185518 ACACCAATTCCTCCAGCTGATTTGCTGATAATAGCACACTCCTTCAAAGTGTCATATATT 185577 Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971 ||||| || || |||||| |||| || | ||| ||||| Sbjct 185578 CCCTCAATACTGTCATCTTTCATACACAGTAAAAAGCAGCT 185618 Score = 89.7 bits (98), Expect = 7e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 68737 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATT 68796 ||||||||| | || ||||| ||||||||||| | | ||||||||||| ||||| Sbjct 183433 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 183492 Query 68797 TGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTT 68856 || |||||||||||||||||||||||| | ||| | |||||| | ||||| | Sbjct 183493 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 183552 Query 68857 ATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888 || || ||| | ||| ||||| ||||| Sbjct 183553 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCA 183584 >seq8664 Length=49552 Score = 104 bits (114), Expect = 3e-17 Identities = 108/142 (76%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 69813 AGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAG 69872 |||| |||||||||||||| ||||||||| ||| | || |||||||| || ||| | Sbjct 45178 AGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGAAAC 45119 Query 69873 ACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACC 69932 ||| |||||||| || ||| ||| | |||||| ||||| || |||||||| || Sbjct 45118 ACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATATTCC 45059 Query 69933 CTCTATGCTATCATCTATCATG 69954 || || ||||||||| ||||| Sbjct 45058 TTCAATACTATCATCTTTCATG 45037 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 ||| || ||||| || | || ||||| || |||||||||||| ||| ||| | || | Sbjct 44898 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 44839 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 || |||| ||||| || || || || || ||||||||| | || || | ||| || Sbjct 44838 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 44779 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 |||||||||||| | ||||| || | | |||||| || || || | ||||| Sbjct 44778 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 44719 Query 70170 AGTTTTAAACCCAAAATA 70187 ||||| || ||||| || Sbjct 44718 GGTTTTGAAGCCAAAGTA 44701 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 ||| || ||||| || | || ||||| || |||||||||||| ||| ||| | || | Sbjct 49323 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 49264 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 || |||| ||||| || || || || || ||||||||| | || || | ||| || Sbjct 49263 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 49204 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||| |||||||| | ||||| || | | |||||| || || || | ||||| Sbjct 49203 CATGTGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 49144 Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTC 70202 ||||| || ||||| || | ||| |||||| Sbjct 49143 GGTTTTGAAGCCAAAGTAATCGTAGTCAAAGTC 49111 >seq23340 Length=555426 Score = 91.5 bits (100), Expect = 2e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 68734 AACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGA 68793 || ||||| ||| | |||||||| ||||||||| || | |||||||||| || ||| Sbjct 1845 AAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAGA 1786 Query 68794 ATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCAT 68851 || ||| |||||| ||||||||||||||||| | ||||| |||||| | |||| Sbjct 1785 ATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT 1728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686653347203640