Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq24296 104 3e-17
seq13744 100 4e-16
seq19704 98.7 1e-15
seq25332 96.9 4e-15
seq22586 96.9 4e-15
seq7139 95.1 2e-14
seq27182 89.7 6e-13
seq16259 89.7 6e-13
seq12755 89.7 6e-13
seq8664 89.7 6e-13
seq216 86.0 8e-12
>seq24296
Length=628690
Score = 104 bits (114), Expect = 3e-17
Identities = 247/370 (67%), Gaps = 10/370 (3%)
Strand=Plus/Minus
Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCC 11509
|| ||||| | |||||| || | | ||| ||||||| | |||| | || || ||
Sbjct 202733 CGGTCAAACCTACCCGGTCGCAACAAAGCGGCATCAAGAACATCCGGTCTGTTGGTTGCT 202674
Query 11510 GCAATAACCACAATGCCAGTCT-CATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATT 11568
|| | ||| | | |||| | | || ||| ||||||||||| || | || |||||
Sbjct 202673 GCCAAAACAATGACACCAGAATTCCCTGA-AAATCCATCCATCTCAGTCAACAACTGATT 202615
Query 11569 AATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCCAC 11628
||||| || ||||||||||||||| || | |||||| | | || | || ||
Sbjct 202614 GATTGTCTGCTCTCTCTCATCATTTCCTCCTCCAAGACCAGCTCCTCTCTGTCTCCCAAC 202555
Query 11629 CGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATTTCAA 11684
||||||||||||||||||||||| || || || ||| ||| ||| | || |
Sbjct 202554 AGCATCAATCTCATCAATGAAGACGATGCAAGGAGCCTTGGATTT----GGCCTTATCGA 202499
Query 11685 AGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAG 11744
| | || | || || ||||| || ||||| |||| ||||||||| | | ||||
Sbjct 202498 ATAAGTCCCTTACTCTGGATGCACCTACTCCAACGAACAACTCCACAAACTCAGAAGCAG 202439
Query 11745 AGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTC 11804
||| || || || || | ||| ||||| | |||| || | || |||||||
Sbjct 202438 CGCATGAGAAAAACGGAACCCCGGCTTCTCCCGCTACTGCTCTCGCCAATAGAGTCTTTC 202379
Query 11805 CCGTACCTGG 11814
| ||||| ||
Sbjct 202378 CAGTACCAGG 202369
>seq13744
Length=547370
Score = 100 bits (110), Expect = 4e-16
Identities = 246/370 (66%), Gaps = 10/370 (3%)
Strand=Plus/Minus
Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCC 11509
|| ||||| | |||||| || | | ||| ||||||| | |||| | || || ||
Sbjct 413011 CGGTCAAACCTACCCGGTCGCAACAAAGCGGCATCAAGAACATCCGGTCTGTTGGTTGCT 412952
Query 11510 GCAATAACCACAATGCCAGTCT-CATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATT 11568
|| | ||| | | |||| | | || ||| ||||||||||| || | || |||||
Sbjct 412951 GCCAAAACAATGACACCAGAATTCCCTGA-AAATCCATCCATCTCAGTCAACAACTGATT 412893
Query 11569 AATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCCAC 11628
||||| || ||||||||||||||| || | |||||| | | || | || ||
Sbjct 412892 GATTGTCTGCTCTCTCTCATCATTTCCTCCTCCAAGACCAGCTCCTCTCTGTCTCCCAAC 412833
Query 11629 CGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATTTCAA 11684
||||||||||||||||||||||| || || || ||| ||| ||| | || |
Sbjct 412832 AGCATCAATCTCATCAATGAAGACGATGCAAGGAGCCTTGGATTT----GGCCTTATCGA 412777
Query 11685 AGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAG 11744
| | || | || || ||||| || ||||| |||| ||||||||| | | ||||
Sbjct 412776 ATAAGTCCCTTACTCTGGATGCACCTACTCCAACGAACAACTCCACAAACTCAGAAGCAG 412717
Query 11745 AGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTC 11804
||| || || || || | ||| || || | |||| || | || |||||||
Sbjct 412716 CGCATGAGAAAAACGGAACCCCGGCTTCTCCTGCTACTGCTCTCGCCAATAGAGTCTTTC 412657
Query 11805 CCGTACCTGG 11814
| ||||| ||
Sbjct 412656 CAGTACCAGG 412647
Score = 100 bits (110), Expect = 4e-16
Identities = 246/370 (66%), Gaps = 10/370 (3%)
Strand=Plus/Minus
Query 11450 CGATCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCC 11509
|| ||||| | |||||| || | | ||| ||||||| | |||| | || || ||
Sbjct 417112 CGGTCAAACCTACCCGGTCGCAACAAAGCGGCATCAAGAACATCCGGTCTGTTGGTTGCT 417053
Query 11510 GCAATAACCACAATGCCAGTCT-CATTGTCAAAGCCATCCATCTCGGTGAGTAATTGATT 11568
|| | ||| | | |||| | | || ||| ||||||||||| || | || |||||
Sbjct 417052 GCCAAAACAATGACACCAGAATTCCCTGA-AAATCCATCCATCTCAGTCAACAACTGATT 416994
Query 11569 AATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGCTTGCCCAC 11628
||||| || ||||||||||||||| || | |||||| | | || | || ||
Sbjct 416993 GATTGTCTGCTCTCTCTCATCATTTCCTCCTCCAAGACCAGCTCCTCTCTGTCTCCCAAC 416934
Query 11629 CGCATCAATCTCATCAATGAAGACAATACATGG----TTGATTTTCGCGGGCGATTTCAA 11684
||||||||||||||||||||||| || || || ||| ||| ||| | || |
Sbjct 416933 AGCATCAATCTCATCAATGAAGACGATGCAAGGAGCCTTGGATTT----GGCCTTATCGA 416878
Query 11685 AGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAG 11744
| | || | || || ||||| || ||||| |||| ||||||||| | | ||||
Sbjct 416877 ATAAGTCCCTTACTCTGGATGCACCTACTCCAACGAACAACTCCACAAACTCAGAAGCAG 416818
Query 11745 AGCACTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTC 11804
||| || || || || | ||| || || | |||| || | || |||||||
Sbjct 416817 CGCATGAGAAAAACGGAACCCCGGCTTCTCCTGCTACTGCTCTCGCCAATAGAGTCTTTC 416758
Query 11805 CCGTACCTGG 11814
| ||||| ||
Sbjct 416757 CAGTACCAGG 416748
>seq19704
Length=164701
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 112000
|| || ||||| || ||||||||||| || || || | || ||| | ||| | |||
Sbjct 135493 TGAGGCCTTGGAGTTCCAGCATTGAAAAGTGTGGGAGAAGCATGAGTAAACCATCTTTGA 135434
Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060
|||||| ||| || || | | ||||||||||||| | | || || || | |||
Sbjct 135433 GACATCATGTGATAAGTTTTTATAGCAGAATCAATGTCATTCTTATGAATTCCAACTGCA 135374
Query 112061 ACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGATA 112119
|||| ||| ||||||| || || |||| || | | || | || | || | || ||
Sbjct 135373 ACCCTCATTAACATGTGTTGGGGCCTTTCTAT-AACCTTCCCTTGAACTTTTAAGAGGTA 135315
Query 112120 GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCCG 112167
| | ||||||||||||||| |||||| ||| || | ||| |||||||
Sbjct 135314 GGACCTCTCAAGGGTTTTGAAACCAAAATAATCATAGTCAAAGTCCCG 135267
>seq25332
Length=434290
Score = 96.9 bits (106), Expect = 4e-15
Identities = 161/229 (70%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 112000
|| || ||||| || ||||||||||| || || || | || ||| | ||| | |||
Sbjct 185730 TGAGGCCTTGGAGTTCCAGCATTGAAAAGTGTGGGAGAAGCATGAGTAAACCATCTTTGA 185789
Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060
|||||| ||| || || | | ||||||||||||| | | || || || | |||
Sbjct 185790 GACATCATGTGATAAGTTTTTATAGCAGAATCAATGTCATTCTTATGAATTCCAACTGCA 185849
Query 112061 ACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGA--T 112118
|||| ||| ||||||| || || |||| || | | || | || | || |||| |
Sbjct 185850 ACCCTCATTAACATGTGTTGGGGCCTTTCTAT-AACCTTCCCTTGA-ACTTTCAAGAGGT 185907
Query 112119 AGCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCCG 112167
|| | ||||||||||||||| |||||| ||| || | ||| |||||||
Sbjct 185908 AGGACCTCTCAAGGGTTTTGAAACCAAAATAATCATAGTCAAAGTCCCG 185956
>seq22586
Length=877411
Score = 96.9 bits (106), Expect = 4e-15
Identities = 156/223 (70%), Gaps = 5/223 (2%)
Strand=Plus/Plus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
||||||||| |||||||| || || | || |||||||| || || ||||| | ||
Sbjct 443832 GTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGCATTAACCC 443891
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|| ||| || |||||| | || || ||||| |||||||| ||||| ||||| || ||
Sbjct 443892 CCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCCTCTACGCA 443951
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTG 122848
||||| || | | ||||||||||| | || | | || | ||||||||| |
Sbjct 443952 AGCAAAAGCGATTAACCGTTCGGCGAA----AGTTTCTCCGCCGTCGATCCATTTCATAG 444007
Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891
|||| | || || || | | ||| || || || | ||||||
Sbjct 444008 CCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGC 444050
Score = 96.9 bits (106), Expect = 4e-15
Identities = 156/223 (70%), Gaps = 5/223 (2%)
Strand=Plus/Plus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
||||||||| |||||||| || || | || |||||||| || || ||||| | ||
Sbjct 446967 GTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGCATTAACCC 447026
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|| ||| || |||||| | || || ||||| |||||||| ||||| ||||| || ||
Sbjct 447027 CCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCCTCTACGCA 447086
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTG 122848
||||| || | | ||||||||||| | || | | || | ||||||||| |
Sbjct 447087 AGCAAAAGCGATTAACCGTTCGGCGAA----AGTTTCTCCGCCGTCGATCCATTTCATAG 447142
Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891
|||| | || || || | | ||| || || || | ||||||
Sbjct 447143 CCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGC 447185
>seq7139
Length=440615
Score = 95.1 bits (104), Expect = 2e-14
Identities = 302/461 (66%), Gaps = 8/461 (2%)
Strand=Plus/Plus
Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541
|||||| || || | | ||||| || ||||| || | || || || | | || ||
Sbjct 160810 ATCAAGAATGTCAGCTCTGTTAGTTGCTGCAATTACGATGATACCGGTGTTACCCTCGAA 160869
Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601
|||||||| ||||| | | || |||| ||||| |||||||||||||| ||
Sbjct 160870 ACCATCCATTTCGGTCAAAAGCTGGTTAAGAGTTTGCTCTCTCTCATCATTCCCTCCACC 160929
Query 11602 ACCACCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGG 11661
| ||||| | | ||| || || |||||||| ||||| | ||||| ||||| ||
Sbjct 160930 AATACCAGTTCCTCTTTGTCGTCCAACGGCATCAATTTCATCCACAAAGACGATACAGGG 160989
Query 11662 TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAA 11721
||| || ||| | | || ||||| ||||| | ||||| |||||||||||
Sbjct 160990 GGCATTCTCCTTGGCCTTCTTGAAAAGATCACGAACTCGAGAAGCACCAACACCAACAAA 161049
Query 11722 CATCTCCACAAAGTTTGCGGCAGAGCACTG--GATGAATGGGACATTTGATTCACCCGCG 11779
||| || ||||| | | | || | || || |||||| ||| | |||||| ||
Sbjct 161050 CATTTCAACAAACTCAGAACCGGA--AATGGAGAAGAATGGCACACCAGCTTCACCGGCA 161107
Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGG 11839
|| || || || || |||||||| || || || || |||||| | |||
Sbjct 161108 ATTGCCTTAGCAAGAAGAGTCTTTCCGGTTCCAGGAGGGCCAATGAGAAGAACACCTTTA 161167
Query 11840 GGGAT-CTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCT- 11897
||||| | | | | ||| | || |||| || || | ||| | || ||||||| ||
Sbjct 161168 GGGATACGAGCCCCGACTGCGGTAA-ATCTTTCTGGCTTCTTTAAGAACTCCACAACCTC 161226
Query 11898 CTTCAAGTTCATCTTTGGCCGCGTCAATCCCCTCAACATCA 11938
| | |||| | |||| || | |||| || ||||||||
Sbjct 161227 CATGAAGTCCTGCTTT-GCTTCATCAACTCCAGCAACATCA 161266
>seq27182
Length=171535
Score = 89.7 bits (98), Expect = 6e-13
Identities = 171/252 (68%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 11482 ATCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAA 11541
|||||| || || | | ||||| || ||||| || | || || || | | || ||
Sbjct 138808 ATCAAGAATGTCAGCTCTGTTAGTTGCTGCAATTACGATGATACCGGTGTTACCCTCGAA 138867
Query 11542 GCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCAT 11601
|||||||| ||||| | | || |||| ||||| |||||||||||||| ||
Sbjct 138868 ACCATCCATTTCGGTCAAAAGCTGGTTAAGAGTTTGCTCTCTCTCATCATTCCCTCCACC 138927
Query 11602 ACCACCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGG 11661
| ||||| | | ||| || || |||||||| ||||| | ||||| ||||| ||
Sbjct 138928 AATACCAGTTCCTCTTTGTCGTCCAACGGCATCAATTTCATCCACAAAGACGATACAGGG 138987
Query 11662 TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAA 11721
||| || ||| | | || ||||| ||||| | ||||| |||||||||||
Sbjct 138988 GGCATTCTCCTTGGCCTTCTTGAAAAGATCACGAACTCGAGAAGCACCAACACCAACAAA 139047
Query 11722 CATCTCCACAAA 11733
||| || |||||
Sbjct 139048 CATTTCAACAAA 139059
>seq16259
Length=81889
Score = 89.7 bits (98), Expect = 6e-13
Identities = 142/202 (70%), Gaps = 14/202 (7%)
Strand=Plus/Plus
Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598
||| ||||||||||| || || || ||||| ||||| || ||||| ||||||||| ||
Sbjct 33794 AAATCCATCCATCTCAGTCAGCAACTGATTGATTGTCTGCTCTCTTTCATCATTTCCT-- 33851
Query 11599 CATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656
| | | | ||||| | | || | || || ||||| |||||||| ||||| |||||
Sbjct 33852 CCTCCAAGCCCAGCTCCTCTCTGTCTCCCAACAGCATCGATCTCATCTATGAATACAATC 33911
Query 11657 CATGG-----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCA 11711
|| || | |||||| || ||||||| | ||| | ||||| | || |
Sbjct 33912 CAAGGCGCTTTGGATTTT-----GCCTTTTCAAACAAATCCCTTACCCTGGACGTGCCTA 33966
Query 11712 CACCAACAAACATCTCCACAAA 11733
| ||||| |||| |||||||||
Sbjct 33967 CTCCAACGAACAACTCCACAAA 33988
>seq12755
Length=243795
Score = 89.7 bits (98), Expect = 6e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 112000
|| || ||||| || ||||||||||| || || || | || ||| ||||| | |||
Sbjct 39913 TGAGGCCTTGGAGTGCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGA 39854
Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060
|||||| ||| || || | | ||||||||||||| ||| || || || | ||
Sbjct 39853 GACATCATGTGATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCA 39794
Query 112061 ACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGATA 112119
|||| ||| ||||| | ||| || |||| || | | || | || | | | |||||
Sbjct 39793 ACCCTCATTAACATATGCTGAGGCCTTTCTAT-AACCTTCCCTTGAACTTTCAAGAGATA 39735
Query 112120 GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCCG 112167
| |||| |||||||||| ||||||||| || | ||| |||| ||
Sbjct 39734 AGACCTCTCCAGGGTTTTGAAGCCAAAGTAATCATAGTCAAAGTCACG 39687
>seq8664
Length=49552
Score = 89.7 bits (98), Expect = 6e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 112000
|| || ||||| || ||||||||||| || || || | || ||| ||||| | |||
Sbjct 44909 TGAGGCCTTGGAGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGA 44850
Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060
|||||| ||| || || | | ||||||||||||| ||| || || || | ||
Sbjct 44849 GACATCATGTGATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCA 44790
Query 112061 ACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGATA 112119
|||| ||| ||||| | ||| || |||| || | | || | || | | | |||||
Sbjct 44789 ACCCTCATTAACATATGCTGAGGCCTTTCTAT-AACCTTCCCTTGAACTTTCAAGAGATA 44731
Query 112120 GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCCG 112167
| |||| |||||||||| ||||||||| || | ||| |||| ||
Sbjct 44730 AGACCTCTCCAGGGTTTTGAAGCCAAAGTAATCATAGTCAAAGTCACG 44683
Score = 89.7 bits (98), Expect = 6e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 112000
|| || ||||| || ||||||||||| || || || | || ||| ||||| | |||
Sbjct 49334 TGAGGCCTTGGAGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGA 49275
Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060
|||||| ||| || || | | ||||||||||||| ||| || || || | ||
Sbjct 49274 GACATCATGTGATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCA 49215
Query 112061 ACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA-AGATA 112119
|||| ||| ||||||| ||| || |||| || | | || | || | | | |||||
Sbjct 49214 ACCCTCATTAACATGTGCTGAGGCCTTTCTAT-AACCTTCCCTTGAACTTTCAAGAGATA 49156
Query 112120 GCTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTCCCG 112167
| |||| |||||||||| ||||||||| | | ||| |||| ||
Sbjct 49155 AGACCTCTCCAGGGTTTTGAAGCCAAAGTAATCGTAGTCAAAGTCACG 49108
>seq216
Length=206475
Score = 86.0 bits (94), Expect = 8e-12
Identities = 190/283 (67%), Gaps = 14/283 (5%)
Strand=Plus/Plus
Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598
||| ||||||||||| || || || || || ||||| || ||||| ||||||||| ||
Sbjct 161969 AAATCCATCCATCTCAGTCAGCAACTGGTTGATTGTCTGCTCTCTTTCATCATTTCCT-- 162026
Query 11599 CATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656
| | | | ||||| | | || | || || ||||| |||||||| ||||| |||||
Sbjct 162027 CCTCCAAGCCCAGCTCCTCTCTGTCTCCCAACAGCATCGATCTCATCTATGAATACAATG 162086
Query 11657 CATGG-----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCA 11711
|| || | |||||| || |||| || | ||| | ||||| || || |
Sbjct 162087 CAAGGCGCTTTGGATTTT-----GCCTTTTCGAACAAATCCCTTACCCTGGACGCGCCTA 162141
Query 11712 CACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATT 11771
| ||||| |||| ||||||||| | | || | ||| || || || || | ||
Sbjct 162142 CTCCAACGAACAACTCCACAAACTCCGAAGCTGCGCATGAGAAAAAGGGCACCCCGGCTT 162201
Query 11772 CACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814
| || || | ||||| || | || ||||| || ||||| ||
Sbjct 162202 CCCCTGCCACGGCTCTCGCCAATAGAGTCTTGCCGGTACCAGG 162244
Score = 84.2 bits (92), Expect = 3e-11
Identities = 141/202 (70%), Gaps = 14/202 (7%)
Strand=Plus/Plus
Query 11539 AAAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGG 11598
||| ||||||||||| || || || || || ||||| || ||||| ||||||||| ||
Sbjct 160876 AAATCCATCCATCTCAGTCAGCAACTGGTTGATTGTCTGCTCTCTTTCATCATTTCCT-- 160933
Query 11599 CATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATA 11656
| | | | ||||| | | || | || || ||||| |||||||| ||||| |||||
Sbjct 160934 CCTCCAAGCCCAGCTCCTCTCTGTCTCCCAACAGCATCGATCTCATCTATGAATACAATG 160993
Query 11657 CATGG-----TTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCA 11711
|| || | |||||| || |||| || | ||| | ||||| || || |
Sbjct 160994 CAAGGCGCTTTGGATTTT-----GCCTTTTCGAACAAATCCCTTACCCTGGACGCGCCTA 161048
Query 11712 CACCAACAAACATCTCCACAAA 11733
| ||||| |||| |||||||||
Sbjct 161049 CTCCAACGAACAACTCCACAAA 161070
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627798442749600
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