Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03] 29,751 sequences; 2,566,742,836 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq29212 206 4e-48 seq22586 196 7e-45 seq28581 132 7e-26 seq25332 111 2e-19 seq19704 105 9e-18 seq12755 93.3 6e-14 seq23340 89.7 7e-13 seq8664 84.2 3e-11 >seq29212 Length=358297 Score = 206 bits (228), Expect = 4e-48 Identities = 576/875 (66%), Gaps = 18/875 (2%) Strand=Plus/Minus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 || ||||| || || || | |||||||| ||||| ||||| |||| |||||| || | Sbjct 223514 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 223455 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| ||||||| || ||| | ||||| || ||||| | | ||||| || | | Sbjct 223454 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 223395 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-TAAG 48028 | | ||| |||||||| || || ||| |||||| |||| ||||| || | ||| Sbjct 223394 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCGTTCATCCCAACTAAC 223335 Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCC---ACTAT 48085 | || ||||| || | |||||| || ||| || |||||| ||||| Sbjct 223334 GCGCAG-GGAAGAGCGTCGCATACAAACTCCCTCTCTATATCCACCGCATCCCTCACTAT 223276 Query 48086 TATCGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACAT 48143 | | | || || |||||| | | || | | | || || || || Sbjct 223275 TCCCT---TCACGCGCTCTTCACTTAGCTTTGACTGGAGGAGAGAGTA--CAGCAAGCAA 223221 Query 48144 GCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCG 48203 ||||| || ||||| ||||||||||||| | || || ||||| || || || | || Sbjct 223220 GCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCCA 223161 Query 48204 GGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATG 48263 ||||||| || || ||||| | ||||||||| || |||| || || || |||||| Sbjct 223160 GGCATTAACCCGCGCTTTTTTAACCAAAATATCGCACAGAAACTGCCGGAGAAAAATATG 223101 Query 48264 CCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT-GT--ATC 48320 ||||||||| || || ||| | | | || | || |||||| | || ||| Sbjct 223100 CCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAA---GCTTCGCCGCCGTCGATC 223044 Query 48321 CACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 48380 || |||||||| || || || || || |||| ||||| |||| | ||| Sbjct 223043 CATTTCAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTAGCGTGGAAG 222984 Query 48381 AGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCG 48440 || ||||||||| || |||||||| ||||| || | | ||||||||||| || Sbjct 222983 AGGCGGTTTTTTTCGGTGGAATCTTTAATATAAGTTTCGAGGAGGAGACTATACATCTCA 222924 Query 48441 GAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGT 48500 ||||| ||||| || || || || || ||||| ||||| | ||| || | ||| || Sbjct 222923 GAGTGGATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGCGCCTCCGCGATTTGG 222864 Query 48501 ACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAA 48560 ||||| | || || |||| | ||| || || || ||||| || || || Sbjct 222863 ACCTCTTTCATGAAGCGAACAGCGAGATTTTCTAGAACGATGCCATCGGATGCGGCGAAG 222804 Query 48561 AATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTG 48620 || || | ||||| | || || | ||||| || | || || | ||||| Sbjct 222803 AAGGCAAGGACATGACTGATGAAGTGGCGTTCGTCGGCGTTAAGATTTTGCCAGTGTGGA 222744 Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680 | ||| || | ||| ||||| || || |||||||| || || || ||||| |||||| Sbjct 222743 AGATCGGAAGAGAGATCAACTTCCTCGGCAGTCCAAAAAGAGGCTTCGGCTTTCTTATAC 222684 Query 48681 ATATTCCATATATCACTGTATTGGATTGGGAAAAT 48715 || | |||||| | ||||||||||||||| || Sbjct 222683 ATTTCCCATATCTGTGGGTATTGGATTGGGAACAT 222649 >seq22586 Length=877411 Score = 196 bits (216), Expect = 7e-45 Identities = 568/870 (65%), Gaps = 6/870 (1%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 |||||||| || || || | ||||||||| ||||| ||||| |||| ||| ||||| | Sbjct 443527 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 443586 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| |||||||||| || || | || || || ||| | ||||| || | | Sbjct 443587 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 443646 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 | | ||| || ||||| || || || |||| | || | ||||| || | | Sbjct 443647 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 443706 Query 48030 TTAACTGGTAGAGCCTC-CGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 || ||||| || | || ||| ||| || || || || ||| || ||| Sbjct 443707 GCGCAGGGCAGAGCATCGCATACGAA-CTCCCTCTCTATGTCCACCGCGTCCCTTACTAT 443765 Query 48089 CGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCA 48146 | | | || ||| ||||| | | || | | | || || || || || Sbjct 443766 CCCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCG 443823 Query 48147 AAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGC 48206 |||||||| || ||||||||||||| ||||| ||||| || || || | |||||| Sbjct 443824 AAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGC 443883 Query 48207 ATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCT 48266 |||| || | ||||| | ||||||||| || |||| ||| || || || || || Sbjct 443884 ATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCC 443943 Query 48267 TCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATCCACCGT 48326 |||||| ||||| ||| | | | || || || | || || || ||||| Sbjct 443944 TCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTC 444003 Query 48327 TGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 48386 ||||| || || || || ||||| |||| || || || || || ||| | Sbjct 444004 ATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGG 444063 Query 48387 tttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGA 48446 || ||||||| | |||||| | |||||| || | | ||||| ||||| |||||||| Sbjct 444064 TTCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGG 444123 Query 48447 ATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCC 48506 |||||||| || || || || || || |||||| | ||| || | |||||| ||||| Sbjct 444124 ATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTCT 444183 Query 48507 GTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCT 48566 | || || |||| | |||||| ||||| ||||| || || ||||| || Sbjct 444184 TTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGCG 444243 Query 48567 AATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCT 48626 | || || |||| || | | || | || || || | | ||||| | | ||| Sbjct 444244 AGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATCG 444303 Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || | ||| ||||| || || |||||||| || || || ||||| || ||||| | | Sbjct 444304 GAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTCC 444363 Query 48687 CATATATCACTGTATTGGATTGGGAAAATA 48716 |||| || ||||||||| || || ||| Sbjct 444364 CATACTTCTGGGTATTGGATCGGAAACATA 444393 Score = 196 bits (216), Expect = 7e-45 Identities = 568/870 (65%), Gaps = 6/870 (1%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 |||||||| || || || | ||||||||| ||||| ||||| |||| ||| ||||| | Sbjct 446662 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 446721 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| |||||||||| || || | || || || ||| | ||||| || | | Sbjct 446722 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 446781 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029 | | ||| || ||||| || || || |||| | || | ||||| || | | Sbjct 446782 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 446841 Query 48030 TTAACTGGTAGAGCCTC-CGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088 || ||||| || | || ||| ||| || || || || ||| || ||| Sbjct 446842 GCGCAGGGCAGAGCATCGCATACGAA-CTCCCTCTCTATGTCCACCGCGTCCCTTACTAT 446900 Query 48089 CGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCA 48146 | | | || ||| ||||| | | || | | | || || || || || Sbjct 446901 CCCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCG 446958 Query 48147 AAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGC 48206 |||||||| || ||||||||||||| ||||| ||||| || || || | |||||| Sbjct 446959 AAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGC 447018 Query 48207 ATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCT 48266 |||| || | ||||| | ||||||||| || |||| ||| || || || || || Sbjct 447019 ATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCC 447078 Query 48267 TCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATCCACCGT 48326 |||||| ||||| ||| | | | || || || | || || || ||||| Sbjct 447079 TCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTC 447138 Query 48327 TGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 48386 ||||| || || || || ||||| |||| || || || || || ||| | Sbjct 447139 ATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGG 447198 Query 48387 tttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGA 48446 || ||||||| | |||||| | |||||| || | | ||||| ||||| |||||||| Sbjct 447199 TTCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGG 447258 Query 48447 ATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCC 48506 |||||||| || || || || || || |||||| | ||| || | |||||| ||||| Sbjct 447259 ATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTCT 447318 Query 48507 GTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCT 48566 | || || |||| | |||||| ||||| ||||| || || ||||| || Sbjct 447319 TTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGCG 447378 Query 48567 AATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCT 48626 | || || |||| || | | || | || || || | | ||||| | | ||| Sbjct 447379 AGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATCG 447438 Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686 || | ||| ||||| || || |||||||| || || || ||||| || ||||| | | Sbjct 447439 GAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTCC 447498 Query 48687 CATATATCACTGTATTGGATTGGGAAAATA 48716 |||| || ||||||||| || || ||| Sbjct 447499 CATACTTCTGGGTATTGGATCGGAAACATA 447528 >seq28581 Length=397638 Score = 132 bits (146), Expect = 7e-26 Identities = 384/581 (66%), Gaps = 24/581 (4%) Strand=Plus/Plus Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909 || ||||| || || || | |||||||| ||||| ||||| |||| |||||| || | Sbjct 33792 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 33851 Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969 ||||| ||||||| || ||| | ||||| || ||||| | | ||||| || | | Sbjct 33852 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 33911 Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-TAA- 48027 | | ||| |||||||| || || ||| |||||| |||| |||||| || | ||| Sbjct 33912 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCATTCATCCCAACTAAC 33971 Query 48028 GTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATC---CACTA 48084 | || || ||||| || | |||||| || ||| || ||||| ||||| Sbjct 33972 GCGCAA--GGAAGAGCGTCGCATACAAACTCCCTCTCTATATACACCGCATCACTCACTA 34029 Query 48085 TTATCGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACA 48142 || | | || || |||||| | | || || | | || || || || Sbjct 34030 TTCCCT---TCACGCGCTCTTCACTTAGCTTTGACTGAAGGAGAGAGTA--CAGCAAGCA 34084 Query 48143 TGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACC 48202 ||||| || ||||| ||||||||||||| | || || ||||| || || || | || Sbjct 34085 AGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCC 34144 Query 48203 GGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATAT 48262 ||||||| || || ||||| | ||||||||| || |||| || || || ||||| Sbjct 34145 AGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTGCCGGAGAAAAATAT 34204 Query 48263 GCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTC---GTTGTGTAT 48319 |||||||||| || || ||| | | | || | || ||||| | || || Sbjct 34205 GCCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAA---GCTTCGCGGCCGTCGAT 34261 Query 48320 CCACCGTTG--TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377 ||| ||| |||||||| || || || || || |||| ||||| |||| | Sbjct 34262 CCA--TTTGAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTAGCGTGG 34319 Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATC 48418 ||||| ||||||||| || |||||| | ||||| || Sbjct 34320 AAGAGGCGGTTTTTTTCGGTGGAATCTTTGATATAAGTTTC 34360 >seq25332 Length=434290 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 |||||||||||| ||| |||| ||| |||||||| || |||||| ||| ||| ||| Sbjct 184913 CTCTCTTTCATAATGAATATACAGCTCCTCAAATTCTTCACCCCAACAATCTGCCAGTCC 184972 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016 || ||||||| || || | |||||||| | |||| || |||| || |||||| Sbjct 184973 TGGAGATTCATTAGGACAGAATAATGACCACTGCCCATTACTCTGGACTCTTTGCATAAA 185032 Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 |||||||| | |||||||||| ||||||||| || Sbjct 185033 AAGATCAGGCACCCATAGAGCATAAAATAGATCACG 185068 Score = 93.3 bits (102), Expect = 6e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 ||||| ||||| | ||| | || |||| ||| | || | || |||||| | ||| || Sbjct 185398 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 185457 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 |||||||| |||||||||||| ||| ||||| | | || |||||||| || || Sbjct 185458 TTAGATGTACCATTTGTTCCACGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 185517 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || |||||||| || || || | ||| || ||||| || || || || Sbjct 185518 ACACCAATTCCTCCAGCTGATTTGCTGATAATAGCACACTCCTTCAAAGTGTCATATATT 185577 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 ||||| ||||||||||| |||| || | ||| ||||| Sbjct 185578 CCCTCAATACTGTCATCTTTCATACACAGTAAAAAGCAGCT 185618 Score = 93.3 bits (102), Expect = 6e-14 Identities = 142/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 |||||| ||||| || | ||| ||||| ||||| ||||||||| ||| ||| | | | Sbjct 185741 AGTTCCAGCATTGAAAAGTGTGGGAGAAGCATGAGTAAACCATCTTTGAGACATCATGTG 185800 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 || |||| ||||| || || ||||| | ||||||||| || || || | ||| || Sbjct 185801 ATAAGTTTTTATAGCAGAATCAATGTCATTCTTATGAATTCCAACTGCAACCCTCATTAA 185860 Query 78518 CATATGCTGAGGTCTTTC---AACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574 ||| || || || ||||| |||| || | | | |||||| | ||| || | || Sbjct 185861 CATGTGTTGGGGCCTTTCTATAACCTTCCCTTGA---ACTTTCAAGAGGTAGGACCTCTC 185917 Query 78575 CAAAGTTTTAAAACCAAAATA 78595 | ||||| ||||||||||| Sbjct 185918 AAGGGTTTTGAAACCAAAATA 185938 Score = 86.0 bits (94), Expect = 9e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 77145 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATT 77204 ||||||||| | || ||||| ||||||||||| | | ||||| ||||| | ||| Sbjct 183433 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 183492 Query 77205 TGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTT 77264 || ||| || ||||||||||||||||| | ||| | |||||| | ||||| | Sbjct 183493 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 183552 Query 77265 CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGA 77324 || || ||| | ||| ||||| ||||| ||| ||||| |||| |||| | | Sbjct 183553 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCACCGATTTGAAGCAGTAACACCCCACATA 183612 Query 77325 TCGTATTGTAGAATTCC 77341 || | || ||||| || Sbjct 183613 TCTTGCTGGAGAATACC 183629 >seq19704 Length=164701 Score = 105 bits (116), Expect = 9e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956 |||||||||||| ||| |||| ||| |||||||| || |||||| ||| ||| ||| Sbjct 136310 CTCTCTTTCATAATGAATATACAGCTCCTCAAATTCTTCACCCCAACAATCTGCCAGTCC 136251 Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016 || ||||||| || || | |||||||| | |||| || |||| || ||| || Sbjct 136250 TGGAGATTCATTAGGACAGAATAATGACCACTGCCCATTACTCTGGACTCTTTGCATGAA 136191 Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052 |||||||| | |||||||||| ||||||||| || Sbjct 136190 AAGATCAGGCACCCATAGAGCATAAAATAGATCACG 136155 Score = 93.3 bits (102), Expect = 6e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 ||||| ||||| | ||| | || |||| ||| | || | || |||||| | ||| || Sbjct 135825 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 135766 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 |||||||| |||||||||||| ||| ||||| | | || |||||||| || || Sbjct 135765 TTAGATGTACCATTTGTTCCATGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 135706 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || |||||||| || || |||| ||| || ||||| || || || || Sbjct 135705 ACACCAATTCCTCCAGCTGATTTGCTGATTATAGCACACTCCTTCAAAGTGTCATATATT 135646 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379 ||||| ||||| ||||| |||| || | ||| ||||| Sbjct 135645 CCCTCAATACTATCATCTTTCATACACAGTAAAAAGCAGCT 135605 Score = 89.7 bits (98), Expect = 7e-13 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 |||||| ||||| || | ||| ||||| ||||| ||||||||| ||| ||| | | | Sbjct 135482 AGTTCCAGCATTGAAAAGTGTGGGAGAAGCATGAGTAAACCATCTTTGAGACATCATGTG 135423 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 || |||| ||||| || || ||||| | ||||||||| || || || | ||| || Sbjct 135422 ATAAGTTTTTATAGCAGAATCAATGTCATTCTTATGAATTCCAACTGCAACCCTCATTAA 135363 Query 78518 CATATGCTGAGGTCTTTC---AACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574 ||| || || || ||||| |||| || | | | ||| || | ||| || | || Sbjct 135362 CATGTGTTGGGGCCTTTCTATAACCTTCCCTTGA---ACTTTTAAGAGGTAGGACCTCTC 135306 Query 78575 CAAAGTTTTAAAACCAAAATA 78595 | ||||| ||||||||||| Sbjct 135305 AAGGGTTTTGAAACCAAAATA 135285 Score = 89.7 bits (98), Expect = 7e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 77145 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATT 77204 ||||||||| | || ||||| ||||||||||| | | ||||| ||||| | ||| Sbjct 137785 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 137726 Query 77205 TGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTT 77264 || ||| || ||||||||||||||||| | ||| | |||||| | ||||| | Sbjct 137725 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 137666 Query 77265 CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGA 77324 || || ||| | ||| ||||| ||||| |||| ||||| |||| |||| | | Sbjct 137665 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCACAGATTTGAAGCAGTAACACCCCACATA 137606 Query 77325 TCGTATTGTAGAATTCC 77341 || | || ||||| || Sbjct 137605 TCTTGCTGGAGAATACC 137589 >seq12755 Length=243795 Score = 93.3 bits (102), Expect = 6e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 ||||| ||||| | ||||| || || | ||| | || | || |||||| | ||| || Sbjct 40244 CCTCCTTGATCAACATATCGAGCAGTATCATTGAACACCCGCAGCATTGGGACAATTCCA 40185 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 |||||||| |||||||||||| ||||||||| || | || |||||||| || || Sbjct 40184 TTAGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGAA 40125 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || |||||||| || || || | ||| || ||||| || || || || Sbjct 40124 ACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATATT 40065 Query 78339 CCCTCTATACTGTCATCCATCATG 78362 || || ||||| ||||| ||||| Sbjct 40064 CCTTCAATACTATCATCTTTCATG 40041 Score = 89.7 bits (98), Expect = 7e-13 Identities = 131/182 (72%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 77141 CAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAA 77200 ||| ||||| ||| | |||||||| ||||||||| || | ||||||| || || | Sbjct 42224 CAAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAG 42165 Query 77201 AATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATG 77260 ||| ||| ||| |||||||||||||||||||| | ||||| |||||| | |||| Sbjct 42164 AATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT- 42106 Query 77261 TGTT--CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 | || || || | || | ||| |||||||||| || ||||||| |||| || Sbjct 42105 TCTTGGCT-ATCATGTCCCTAAGAGCAGTCCAATCCCACCGACCTGAAGGAGTAACACCC 42047 Query 77319 CA 77320 || Sbjct 42046 CA 42045 Score = 84.2 bits (92), Expect = 3e-11 Identities = 140/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||| || ||||| || | || ||||| ||||| || |||||| ||| ||| | | | Sbjct 39902 AGTGCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 39843 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 || |||| ||||| || || ||||| | ||||||||| || || || | ||| || Sbjct 39842 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 39783 Query 78518 CATATGCTGAGGTCTTTC---AACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574 |||||||||||| ||||| |||| || | | | |||||| | || || | || Sbjct 39782 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGA---ACTTTCAAGAGATAAGACCTCTC 39726 Query 78575 CAAAGTTTTAAAACCAAAATA 78595 || ||||| || ||||| || Sbjct 39725 CAGGGTTTTGAAGCCAAAGTA 39705 >seq23340 Length=555426 Score = 89.7 bits (98), Expect = 7e-13 Identities = 131/182 (72%), Gaps = 4/182 (2%) Strand=Plus/Minus Query 77141 CAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAA 77200 ||| ||||| ||| | |||||||| ||||||||| || | ||||||| || || | Sbjct 1846 CAAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAG 1787 Query 77201 AATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATG 77260 ||| ||| ||| |||||||||||||||||||| | ||||| |||||| | |||| Sbjct 1786 AATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT- 1728 Query 77261 TGTT--CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318 | || || || | || | ||| |||||||||| || ||||||| |||| || Sbjct 1727 TCTTGGCT-ATCATGTCCCTAAGAGCAGTCCAATCCCACCGACCTGAAGGAGTAACACCC 1669 Query 77319 CA 77320 || Sbjct 1668 CA 1667 >seq8664 Length=49552 Score = 84.2 bits (92), Expect = 3e-11 Identities = 140/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||| || ||||| || | || ||||| ||||| || |||||| ||| ||| | | | Sbjct 44898 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 44839 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 || |||| ||||| || || ||||| | ||||||||| || || || | ||| || Sbjct 44838 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 44779 Query 78518 CATATGCTGAGGTCTTTC---AACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574 |||||||||||| ||||| |||| || | | | |||||| | || || | || Sbjct 44778 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGA---ACTTTCAAGAGATAAGACCTCTC 44722 Query 78575 CAAAGTTTTAAAACCAAAATA 78595 || ||||| || ||||| || Sbjct 44721 CAGGGTTTTGAAGCCAAAGTA 44701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694410461356640