Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq29212 206 4e-48
seq22586 196 7e-45
seq28581 132 7e-26
seq25332 111 2e-19
seq19704 105 9e-18
seq12755 93.3 6e-14
seq23340 89.7 7e-13
seq8664 84.2 3e-11
>seq29212
Length=358297
Score = 206 bits (228), Expect = 4e-48
Identities = 576/875 (66%), Gaps = 18/875 (2%)
Strand=Plus/Minus
Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909
|| ||||| || || || | |||||||| ||||| ||||| |||| |||||| || |
Sbjct 223514 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 223455
Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969
||||| ||||||| || ||| | ||||| || ||||| | | ||||| || | |
Sbjct 223454 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 223395
Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-TAAG 48028
| | ||| |||||||| || || ||| |||||| |||| ||||| || | |||
Sbjct 223394 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCGTTCATCCCAACTAAC 223335
Query 48029 TTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATCC---ACTAT 48085
| || ||||| || | |||||| || ||| || |||||| |||||
Sbjct 223334 GCGCAG-GGAAGAGCGTCGCATACAAACTCCCTCTCTATATCCACCGCATCCCTCACTAT 223276
Query 48086 TATCGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACAT 48143
| | | || || |||||| | | || | | | || || || ||
Sbjct 223275 TCCCT---TCACGCGCTCTTCACTTAGCTTTGACTGGAGGAGAGAGTA--CAGCAAGCAA 223221
Query 48144 GCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCG 48203
||||| || ||||| ||||||||||||| | || || ||||| || || || | ||
Sbjct 223220 GCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCCA 223161
Query 48204 GGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATG 48263
||||||| || || ||||| | ||||||||| || |||| || || || ||||||
Sbjct 223160 GGCATTAACCCGCGCTTTTTTAACCAAAATATCGCACAGAAACTGCCGGAGAAAAATATG 223101
Query 48264 CCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGT-GT--ATC 48320
||||||||| || || ||| | | | || | || |||||| | || |||
Sbjct 223100 CCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAA---GCTTCGCCGCCGTCGATC 223044
Query 48321 CACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAG 48380
|| |||||||| || || || || || |||| ||||| |||| | |||
Sbjct 223043 CATTTCAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTAGCGTGGAAG 222984
Query 48381 AGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCG 48440
|| ||||||||| || |||||||| ||||| || | | ||||||||||| ||
Sbjct 222983 AGGCGGTTTTTTTCGGTGGAATCTTTAATATAAGTTTCGAGGAGGAGACTATACATCTCA 222924
Query 48441 GAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGT 48500
||||| ||||| || || || || || ||||| ||||| | ||| || | ||| ||
Sbjct 222923 GAGTGGATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGCGCCTCCGCGATTTGG 222864
Query 48501 ACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAA 48560
||||| | || || |||| | ||| || || || ||||| || || ||
Sbjct 222863 ACCTCTTTCATGAAGCGAACAGCGAGATTTTCTAGAACGATGCCATCGGATGCGGCGAAG 222804
Query 48561 AATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTG 48620
|| || | ||||| | || || | ||||| || | || || | |||||
Sbjct 222803 AAGGCAAGGACATGACTGATGAAGTGGCGTTCGTCGGCGTTAAGATTTTGCCAGTGTGGA 222744
Query 48621 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATAC 48680
| ||| || | ||| ||||| || || |||||||| || || || ||||| ||||||
Sbjct 222743 AGATCGGAAGAGAGATCAACTTCCTCGGCAGTCCAAAAAGAGGCTTCGGCTTTCTTATAC 222684
Query 48681 ATATTCCATATATCACTGTATTGGATTGGGAAAAT 48715
|| | |||||| | ||||||||||||||| ||
Sbjct 222683 ATTTCCCATATCTGTGGGTATTGGATTGGGAACAT 222649
>seq22586
Length=877411
Score = 196 bits (216), Expect = 7e-45
Identities = 568/870 (65%), Gaps = 6/870 (1%)
Strand=Plus/Plus
Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909
|||||||| || || || | ||||||||| ||||| ||||| |||| ||| ||||| |
Sbjct 443527 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 443586
Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969
||||| |||||||||| || || | || || || ||| | ||||| || | |
Sbjct 443587 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 443646
Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029
| | ||| || ||||| || || || |||| | || | ||||| || | |
Sbjct 443647 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 443706
Query 48030 TTAACTGGTAGAGCCTC-CGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088
|| ||||| || | || ||| ||| || || || || ||| || |||
Sbjct 443707 GCGCAGGGCAGAGCATCGCATACGAA-CTCCCTCTCTATGTCCACCGCGTCCCTTACTAT 443765
Query 48089 CGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCA 48146
| | | || ||| ||||| | | || | | | || || || || ||
Sbjct 443766 CCCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCG 443823
Query 48147 AAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGC 48206
|||||||| || ||||||||||||| ||||| ||||| || || || | ||||||
Sbjct 443824 AAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGC 443883
Query 48207 ATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCT 48266
|||| || | ||||| | ||||||||| || |||| ||| || || || || ||
Sbjct 443884 ATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCC 443943
Query 48267 TCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATCCACCGT 48326
|||||| ||||| ||| | | | || || || | || || || |||||
Sbjct 443944 TCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTC 444003
Query 48327 TGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 48386
||||| || || || || ||||| |||| || || || || || ||| |
Sbjct 444004 ATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGG 444063
Query 48387 tttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGA 48446
|| ||||||| | |||||| | |||||| || | | ||||| ||||| ||||||||
Sbjct 444064 TTCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGG 444123
Query 48447 ATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCC 48506
|||||||| || || || || || || |||||| | ||| || | |||||| |||||
Sbjct 444124 ATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTCT 444183
Query 48507 GTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCT 48566
| || || |||| | |||||| ||||| ||||| || || ||||| ||
Sbjct 444184 TTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGCG 444243
Query 48567 AATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCT 48626
| || || |||| || | | || | || || || | | ||||| | | |||
Sbjct 444244 AGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATCG 444303
Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686
|| | ||| ||||| || || |||||||| || || || ||||| || ||||| | |
Sbjct 444304 GAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTCC 444363
Query 48687 CATATATCACTGTATTGGATTGGGAAAATA 48716
|||| || ||||||||| || || |||
Sbjct 444364 CATACTTCTGGGTATTGGATCGGAAACATA 444393
Score = 196 bits (216), Expect = 7e-45
Identities = 568/870 (65%), Gaps = 6/870 (1%)
Strand=Plus/Plus
Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909
|||||||| || || || | ||||||||| ||||| ||||| |||| ||| ||||| |
Sbjct 446662 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 446721
Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969
||||| |||||||||| || || | || || || ||| | ||||| || | |
Sbjct 446722 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 446781
Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGT 48029
| | ||| || ||||| || || || |||| | || | ||||| || | |
Sbjct 446782 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 446841
Query 48030 TTAACTGGTAGAGCCTC-CGTAAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTAT 48088
|| ||||| || | || ||| ||| || || || || ||| || |||
Sbjct 446842 GCGCAGGGCAGAGCATCGCATACGAA-CTCCCTCTCTATGTCCACCGCGTCCCTTACTAT 446900
Query 48089 CGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACATGCA 48146
| | | || ||| ||||| | | || | | | || || || || ||
Sbjct 446901 CCCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCG 446958
Query 48147 AAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGC 48206
|||||||| || ||||||||||||| ||||| ||||| || || || | ||||||
Sbjct 446959 AAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGC 447018
Query 48207 ATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCT 48266
|||| || | ||||| | ||||||||| || |||| ||| || || || || ||
Sbjct 447019 ATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCC 447078
Query 48267 TCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCGTTGTGTATCCACCGT 48326
|||||| ||||| ||| | | | || || || | || || || |||||
Sbjct 447079 TCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTC 447138
Query 48327 TGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 48386
||||| || || || || ||||| |||| || || || || || ||| |
Sbjct 447139 ATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGG 447198
Query 48387 tttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGA 48446
|| ||||||| | |||||| | |||||| || | | ||||| ||||| ||||||||
Sbjct 447199 TTCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGG 447258
Query 48447 ATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCC 48506
|||||||| || || || || || || |||||| | ||| || | |||||| |||||
Sbjct 447259 ATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTCT 447318
Query 48507 GTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCT 48566
| || || |||| | |||||| ||||| ||||| || || ||||| ||
Sbjct 447319 TTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGCG 447378
Query 48567 AATACATGTTTAATAAAATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCT 48626
| || || |||| || | | || | || || || | | ||||| | | |||
Sbjct 447379 AGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATCG 447438
Query 48627 TTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTC 48686
|| | ||| ||||| || || |||||||| || || || ||||| || ||||| | |
Sbjct 447439 GAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTCC 447498
Query 48687 CATATATCACTGTATTGGATTGGGAAAATA 48716
|||| || ||||||||| || || |||
Sbjct 447499 CATACTTCTGGGTATTGGATCGGAAACATA 447528
>seq28581
Length=397638
Score = 132 bits (146), Expect = 7e-26
Identities = 384/581 (66%), Gaps = 24/581 (4%)
Strand=Plus/Plus
Query 47850 TTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 47909
|| ||||| || || || | |||||||| ||||| ||||| |||| |||||| || |
Sbjct 33792 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 33851
Query 47910 TCCATAAAATCAAATGGATTAACTGCATTATAAAtttttttAAATCCTAATTCTGAAATC 47969
||||| ||||||| || ||| | ||||| || ||||| | | ||||| || | |
Sbjct 33852 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 33911
Query 47970 AGTCTATCTGCAACGAATTCTATATATCTTTTCATCATTTCACAATTCATTCCTA-TAA- 48027
| | ||| |||||||| || || ||| |||||| |||| |||||| || | |||
Sbjct 33912 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCATTCATCCCAACTAAC 33971
Query 48028 GTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCGATAGTGACAGCATC---CACTA 48084
| || || ||||| || | |||||| || ||| || ||||| |||||
Sbjct 33972 GCGCAA--GGAAGAGCGTCGCATACAAACTCCCTCTCTATATACACCGCATCACTCACTA 34029
Query 48085 TTATCGATGTTACCGTTTCCTCACTTGG--TGGATACAACAAATGTTTAAACATTAAACA 48142
|| | | || || |||||| | | || || | | || || || ||
Sbjct 34030 TTCCCT---TCACGCGCTCTTCACTTAGCTTTGACTGAAGGAGAGAGTA--CAGCAAGCA 34084
Query 48143 TGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACC 48202
||||| || ||||| ||||||||||||| | || || ||||| || || || | ||
Sbjct 34085 AGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCC 34144
Query 48203 GGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATAT 48262
||||||| || || ||||| | ||||||||| || |||| || || || |||||
Sbjct 34145 AGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTGCCGGAGAAAAATAT 34204
Query 48263 GCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTC---GTTGTGTAT 48319
|||||||||| || || ||| | | | || | || ||||| | || ||
Sbjct 34205 GCCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAA---GCTTCGCGGCCGTCGAT 34261
Query 48320 CCACCGTTG--TGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 48377
||| ||| |||||||| || || || || || |||| ||||| |||| |
Sbjct 34262 CCA--TTTGAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTAGCGTGG 34319
Query 48378 AAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATC 48418
||||| ||||||||| || |||||| | ||||| ||
Sbjct 34320 AAGAGGCGGTTTTTTTCGGTGGAATCTTTGATATAAGTTTC 34360
>seq25332
Length=434290
Score = 111 bits (122), Expect = 2e-19
Identities = 118/156 (76%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956
|||||||||||| ||| |||| ||| |||||||| || |||||| ||| ||| |||
Sbjct 184913 CTCTCTTTCATAATGAATATACAGCTCCTCAAATTCTTCACCCCAACAATCTGCCAGTCC 184972
Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016
|| ||||||| || || | |||||||| | |||| || |||| || ||||||
Sbjct 184973 TGGAGATTCATTAGGACAGAATAATGACCACTGCCCATTACTCTGGACTCTTTGCATAAA 185032
Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052
|||||||| | |||||||||| ||||||||| ||
Sbjct 185033 AAGATCAGGCACCCATAGAGCATAAAATAGATCACG 185068
Score = 93.3 bits (102), Expect = 6e-14
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218
||||| ||||| | ||| | || |||| ||| | || | || |||||| | ||| ||
Sbjct 185398 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 185457
Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278
|||||||| |||||||||||| ||| ||||| | | || |||||||| || ||
Sbjct 185458 TTAGATGTACCATTTGTTCCACGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 185517
Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338
| || |||||||| || || || | ||| || ||||| || || || ||
Sbjct 185518 ACACCAATTCCTCCAGCTGATTTGCTGATAATAGCACACTCCTTCAAAGTGTCATATATT 185577
Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379
||||| ||||||||||| |||| || | ||| |||||
Sbjct 185578 CCCTCAATACTGTCATCTTTCATACACAGTAAAAAGCAGCT 185618
Score = 93.3 bits (102), Expect = 6e-14
Identities = 142/201 (71%), Gaps = 6/201 (3%)
Strand=Plus/Plus
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
|||||| ||||| || | ||| ||||| ||||| ||||||||| ||| ||| | | |
Sbjct 185741 AGTTCCAGCATTGAAAAGTGTGGGAGAAGCATGAGTAAACCATCTTTGAGACATCATGTG 185800
Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517
|| |||| ||||| || || ||||| | ||||||||| || || || | ||| ||
Sbjct 185801 ATAAGTTTTTATAGCAGAATCAATGTCATTCTTATGAATTCCAACTGCAACCCTCATTAA 185860
Query 78518 CATATGCTGAGGTCTTTC---AACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574
||| || || || ||||| |||| || | | | |||||| | ||| || | ||
Sbjct 185861 CATGTGTTGGGGCCTTTCTATAACCTTCCCTTGA---ACTTTCAAGAGGTAGGACCTCTC 185917
Query 78575 CAAAGTTTTAAAACCAAAATA 78595
| ||||| |||||||||||
Sbjct 185918 AAGGGTTTTGAAACCAAAATA 185938
Score = 86.0 bits (94), Expect = 9e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 77145 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATT 77204
||||||||| | || ||||| ||||||||||| | | ||||| ||||| | |||
Sbjct 183433 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 183492
Query 77205 TGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTT 77264
|| ||| || ||||||||||||||||| | ||| | |||||| | ||||| |
Sbjct 183493 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 183552
Query 77265 CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGA 77324
|| || ||| | ||| ||||| ||||| ||| ||||| |||| |||| | |
Sbjct 183553 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCACCGATTTGAAGCAGTAACACCCCACATA 183612
Query 77325 TCGTATTGTAGAATTCC 77341
|| | || ||||| ||
Sbjct 183613 TCTTGCTGGAGAATACC 183629
>seq19704
Length=164701
Score = 105 bits (116), Expect = 9e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 77897 CTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCC 77956
|||||||||||| ||| |||| ||| |||||||| || |||||| ||| ||| |||
Sbjct 136310 CTCTCTTTCATAATGAATATACAGCTCCTCAAATTCTTCACCCCAACAATCTGCCAGTCC 136251
Query 77957 AGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAA 78016
|| ||||||| || || | |||||||| | |||| || |||| || ||| ||
Sbjct 136250 TGGAGATTCATTAGGACAGAATAATGACCACTGCCCATTACTCTGGACTCTTTGCATGAA 136191
Query 78017 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 78052
|||||||| | |||||||||| ||||||||| ||
Sbjct 136190 AAGATCAGGCACCCATAGAGCATAAAATAGATCACG 136155
Score = 93.3 bits (102), Expect = 6e-14
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218
||||| ||||| | ||| | || |||| ||| | || | || |||||| | ||| ||
Sbjct 135825 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 135766
Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278
|||||||| |||||||||||| ||| ||||| | | || |||||||| || ||
Sbjct 135765 TTAGATGTACCATTTGTTCCATGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 135706
Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338
| || |||||||| || || |||| ||| || ||||| || || || ||
Sbjct 135705 ACACCAATTCCTCCAGCTGATTTGCTGATTATAGCACACTCCTTCAAAGTGTCATATATT 135646
Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCT 78379
||||| ||||| ||||| |||| || | ||| |||||
Sbjct 135645 CCCTCAATACTATCATCTTTCATACACAGTAAAAAGCAGCT 135605
Score = 89.7 bits (98), Expect = 7e-13
Identities = 141/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
|||||| ||||| || | ||| ||||| ||||| ||||||||| ||| ||| | | |
Sbjct 135482 AGTTCCAGCATTGAAAAGTGTGGGAGAAGCATGAGTAAACCATCTTTGAGACATCATGTG 135423
Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517
|| |||| ||||| || || ||||| | ||||||||| || || || | ||| ||
Sbjct 135422 ATAAGTTTTTATAGCAGAATCAATGTCATTCTTATGAATTCCAACTGCAACCCTCATTAA 135363
Query 78518 CATATGCTGAGGTCTTTC---AACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574
||| || || || ||||| |||| || | | | ||| || | ||| || | ||
Sbjct 135362 CATGTGTTGGGGCCTTTCTATAACCTTCCCTTGA---ACTTTTAAGAGGTAGGACCTCTC 135306
Query 78575 CAAAGTTTTAAAACCAAAATA 78595
| ||||| |||||||||||
Sbjct 135305 AAGGGTTTTGAAACCAAAATA 135285
Score = 89.7 bits (98), Expect = 7e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 77145 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATT 77204
||||||||| | || ||||| ||||||||||| | | ||||| ||||| | |||
Sbjct 137785 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 137726
Query 77205 TGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTT 77264
|| ||| || ||||||||||||||||| | ||| | |||||| | ||||| |
Sbjct 137725 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 137666
Query 77265 CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGA 77324
|| || ||| | ||| ||||| ||||| |||| ||||| |||| |||| | |
Sbjct 137665 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCACAGATTTGAAGCAGTAACACCCCACATA 137606
Query 77325 TCGTATTGTAGAATTCC 77341
|| | || ||||| ||
Sbjct 137605 TCTTGCTGGAGAATACC 137589
>seq12755
Length=243795
Score = 93.3 bits (102), Expect = 6e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218
||||| ||||| | ||||| || || | ||| | || | || |||||| | ||| ||
Sbjct 40244 CCTCCTTGATCAACATATCGAGCAGTATCATTGAACACCCGCAGCATTGGGACAATTCCA 40185
Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278
|||||||| |||||||||||| ||||||||| || | || |||||||| || ||
Sbjct 40184 TTAGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGAA 40125
Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338
| || |||||||| || || || | ||| || ||||| || || || ||
Sbjct 40124 ACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATATT 40065
Query 78339 CCCTCTATACTGTCATCCATCATG 78362
|| || ||||| ||||| |||||
Sbjct 40064 CCTTCAATACTATCATCTTTCATG 40041
Score = 89.7 bits (98), Expect = 7e-13
Identities = 131/182 (72%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 77141 CAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAA 77200
||| ||||| ||| | |||||||| ||||||||| || | ||||||| || || |
Sbjct 42224 CAAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAG 42165
Query 77201 AATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATG 77260
||| ||| ||| |||||||||||||||||||| | ||||| |||||| | ||||
Sbjct 42164 AATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT- 42106
Query 77261 TGTT--CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318
| || || || | || | ||| |||||||||| || ||||||| |||| ||
Sbjct 42105 TCTTGGCT-ATCATGTCCCTAAGAGCAGTCCAATCCCACCGACCTGAAGGAGTAACACCC 42047
Query 77319 CA 77320
||
Sbjct 42046 CA 42045
Score = 84.2 bits (92), Expect = 3e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
||| || ||||| || | || ||||| ||||| || |||||| ||| ||| | | |
Sbjct 39902 AGTGCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 39843
Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517
|| |||| ||||| || || ||||| | ||||||||| || || || | ||| ||
Sbjct 39842 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 39783
Query 78518 CATATGCTGAGGTCTTTC---AACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574
|||||||||||| ||||| |||| || | | | |||||| | || || | ||
Sbjct 39782 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGA---ACTTTCAAGAGATAAGACCTCTC 39726
Query 78575 CAAAGTTTTAAAACCAAAATA 78595
|| ||||| || ||||| ||
Sbjct 39725 CAGGGTTTTGAAGCCAAAGTA 39705
>seq23340
Length=555426
Score = 89.7 bits (98), Expect = 7e-13
Identities = 131/182 (72%), Gaps = 4/182 (2%)
Strand=Plus/Minus
Query 77141 CAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAA 77200
||| ||||| ||| | |||||||| ||||||||| || | ||||||| || || |
Sbjct 1846 CAAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAG 1787
Query 77201 AATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATG 77260
||| ||| ||| |||||||||||||||||||| | ||||| |||||| | ||||
Sbjct 1786 AATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT- 1728
Query 77261 TGTT--CTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCC 77318
| || || || | || | ||| |||||||||| || ||||||| |||| ||
Sbjct 1727 TCTTGGCT-ATCATGTCCCTAAGAGCAGTCCAATCCCACCGACCTGAAGGAGTAACACCC 1669
Query 77319 CA 77320
||
Sbjct 1668 CA 1667
>seq8664
Length=49552
Score = 84.2 bits (92), Expect = 3e-11
Identities = 140/201 (70%), Gaps = 6/201 (3%)
Strand=Plus/Minus
Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457
||| || ||||| || | || ||||| ||||| || |||||| ||| ||| | | |
Sbjct 44898 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 44839
Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517
|| |||| ||||| || || ||||| | ||||||||| || || || | ||| ||
Sbjct 44838 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 44779
Query 78518 CATATGCTGAGGTCTTTC---AACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTC 78574
|||||||||||| ||||| |||| || | | | |||||| | || || | ||
Sbjct 44778 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGA---ACTTTCAAGAGATAAGACCTCTC 44722
Query 78575 CAAAGTTTTAAAACCAAAATA 78595
|| ||||| || ||||| ||
Sbjct 44721 CAGGGTTTTGAAGCCAAAGTA 44701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694410461356640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |