Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20barbadense_20[genbank_20GCA_5F001856525.1_202016-11-03]
29,751 sequences; 2,566,742,836 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq22586 167 3e-36
seq29212 161 1e-34
seq19704 129 8e-25
seq12755 125 1e-23
seq25332 120 4e-22
seq28581 113 6e-20
seq7920 96.9 5e-15
seq8664 89.7 7e-13
seq23340 84.2 3e-11
>seq22586
Length=877411
Score = 167 bits (184), Expect = 3e-36
Identities = 562/871 (65%), Gaps = 8/871 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
||||| || || || || | ||||||||| ||||| ||||| |||| ||| ||||| |
Sbjct 443527 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 443586
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| ||||||| || || || || || || ||| | ||||| || | |
Sbjct 443587 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 443646
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
| | ||| || ||||| || || ||| |||| | || | ||||| || | |
Sbjct 443647 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 443706
Query 46519 TTGACCGGTAGAGCCTC-CGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577
| || ||||| || | || ||| ||| || || || || ||| || |||
Sbjct 443707 GCGCAGGGCAGAGCATCGCATACGAA-CTCCCTCTCTATGTCCACCGCGTCCCTTACTAT 443765
Query 46578 CGATGTTACTGTTTCCTCACTTGG---TGGATGCATCAAATGTTTAAACATTAAACATGC 46634
| | | || ||| ||||| | || | | | | | ||| || || ||
Sbjct 443766 CCCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGT---ACAGCAAGCAAGC 443822
Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694
|||||||| || || |||||||||| ||||| ||||| || || || | || ||
Sbjct 443823 GAAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGG 443882
Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754
||||| || | |||||| | ||||||||| || |||| ||| || || || || ||
Sbjct 443883 CATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCC 443942
Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAATCCACCT 46814
||||| || || |||| | | || || || | | | | ||||| |
Sbjct 443943 CTCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTT 444002
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
|||||| || || ||||| ||||| |||| || || || || || |||
Sbjct 444003 CATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACG 444062
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
||| |||||||| |||||| | || || || | | ||||| ||||| || || ||
Sbjct 444063 GTTCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTG 444122
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
|| ||||| ||||| || || || || |||||| | || || | ||||| |||||
Sbjct 444123 GATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTC 444182
Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054
| | || || ||| | |||||| ||||| ||||| || || ||||| ||
Sbjct 444183 TTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGC 444242
Query 47055 CAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATC 47114
| || || |||| || | | ||||||| || || | | ||||| | | |||
Sbjct 444243 GAGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATC 444302
Query 47115 TTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATT 47174
|| | ||| ||||| || || ||||| || ||||| || ||||| || ||||| |
Sbjct 444303 GGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTC 444362
Query 47175 CCATATATCACGATATTGGATCGGAAAAATA 47205
||||| || | |||||||||||||| |||
Sbjct 444363 CCATACTTCTGGGTATTGGATCGGAAACATA 444393
Score = 167 bits (184), Expect = 3e-36
Identities = 562/871 (65%), Gaps = 8/871 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
||||| || || || || | ||||||||| ||||| ||||| |||| ||| ||||| |
Sbjct 446662 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 446721
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| ||||||| || || || || || || ||| | ||||| || | |
Sbjct 446722 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 446781
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
| | ||| || ||||| || || ||| |||| | || | ||||| || | |
Sbjct 446782 AACCGATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 446841
Query 46519 TTGACCGGTAGAGCCTC-CGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTAT 46577
| || ||||| || | || ||| ||| || || || || ||| || |||
Sbjct 446842 GCGCAGGGCAGAGCATCGCATACGAA-CTCCCTCTCTATGTCCACCGCGTCCCTTACTAT 446900
Query 46578 CGATGTTACTGTTTCCTCACTTGG---TGGATGCATCAAATGTTTAAACATTAAACATGC 46634
| | | || ||| ||||| | || | | | | | ||| || || ||
Sbjct 446901 CCCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGT---ACAGCAAGCAAGC 446957
Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694
|||||||| || || |||||||||| ||||| ||||| || || || | || ||
Sbjct 446958 GAAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGG 447017
Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754
||||| || | |||||| | ||||||||| || |||| ||| || || || || ||
Sbjct 447018 CATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCC 447077
Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAATCCACCT 46814
||||| || || |||| | | || || || | | | | ||||| |
Sbjct 447078 CTCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTT 447137
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
|||||| || || ||||| ||||| |||| || || || || || |||
Sbjct 447138 CATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACG 447197
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
||| |||||||| |||||| | || || || | | ||||| ||||| || || ||
Sbjct 447198 GTTCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTG 447257
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
|| ||||| ||||| || || || || |||||| | || || | ||||| |||||
Sbjct 447258 GATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTC 447317
Query 46995 TGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGC 47054
| | || || ||| | |||||| ||||| ||||| || || ||||| ||
Sbjct 447318 TTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGC 447377
Query 47055 CAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATC 47114
| || || |||| || | | ||||||| || || | | ||||| | | |||
Sbjct 447378 GAGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATC 447437
Query 47115 TTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATT 47174
|| | ||| ||||| || || ||||| || ||||| || ||||| || ||||| |
Sbjct 447438 GGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTC 447497
Query 47175 CCATATATCACGATATTGGATCGGAAAAATA 47205
||||| || | |||||||||||||| |||
Sbjct 447498 CCATACTTCTGGGTATTGGATCGGAAACATA 447528
>seq29212
Length=358297
Score = 161 bits (178), Expect = 1e-34
Identities = 558/869 (64%), Gaps = 6/869 (1%)
Strand=Plus/Minus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| || || || || || | |||||||| ||||| ||||| |||| |||||| || |
Sbjct 223514 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 223455
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| ||||||| || |||| |||| || ||||| | | ||||| || | |
Sbjct 223454 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 223395
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
| | ||| |||||||| || || || |||||| |||| ||||| || | |
Sbjct 223394 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCGTTCATCCCAACTAAC 223335
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578
| || ||||| || | |||||| || ||| || |||||| | |||
Sbjct 223334 GCGCAGGGAAGAGCGTCGCATACAAACTCCCTCTCTATATCCACCGCATCCCTCACTATT 223275
Query 46579 GATGTTACTGTTTCCTCACTTGG---TGGATGCATCAAATGTTTAAACATTAAACATGCA 46635
| || || |||||| | || || | | | | ||| || || |||
Sbjct 223274 CCCTTCACGCGCTCTTCACTTAGCTTTGACTGGAGGAGAGAGT---ACAGCAAGCAAGCA 223218
Query 46636 AAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGC 46695
|| || ||||| || |||||||||| | || || ||||| || || || | ||||||
Sbjct 223217 AAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCCAGGC 223158
Query 46696 ATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCT 46755
|||| || |||||||| | ||||||||| || |||| || || || |||||||||
Sbjct 223157 ATTAACCCGCGCTTTTTTAACCAAAATATCGCACAGAAACTGCCGGAGAAAAATATGCCT 223098
Query 46756 TCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGAATCCACCTT 46815
||||| ||||| |||| | | || | || | | | ||||| |
Sbjct 223097 TCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGCCGCCGTCGATCCATTTC 223038
Query 46816 TGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAG 46875
||||||||| || ||||| || || |||| ||||| |||| | ||||| |
Sbjct 223037 AAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTAGCGTGGAAGAGGCGG 222978
Query 46876 tttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGA 46935
|||||||| |||||||| ||| || || | | ||||||||||| || || ||
Sbjct 222977 TTTTTTTCGGTGGAATCTTTAATATAAGTTTCGAGGAGGAGACTATACATCTCAGAGTGG 222918
Query 46936 ATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCT 46995
|| || || || || || || ||||| ||||| | || || | || || ||||||
Sbjct 222917 ATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGCGCCTCCGCGATTTGGACCTCT 222858
Query 46996 GTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCC 47055
| || || ||| | ||| || || || ||||| || || || || ||
Sbjct 222857 TTCATGAAGCGAACAGCGAGATTTTCTAGAACGATGCCATCGGATGCGGCGAAGAAGGCA 222798
Query 47056 AATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCT 47115
| ||||| | || || | ||| |||| | || || | ||||| | |||
Sbjct 222797 AGGACATGACTGATGAAGTGGCGTTCGTCGGCGTTAAGATTTTGCCAGTGTGGAAGATCG 222738
Query 47116 TTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTC 47175
|| | ||| ||||| || || ||||| || || || || ||||| |||||||| | |
Sbjct 222737 GAAGAGAGATCAACTTCCTCGGCAGTCCAAAAAGAGGCTTCGGCTTTCTTATACATTTCC 222678
Query 47176 CATATATCACGATATTGGATCGGAAAAAT 47204
||||| | | |||||||| || || ||
Sbjct 222677 CATATCTGTGGGTATTGGATTGGGAACAT 222649
>seq19704
Length=164701
Score = 129 bits (142), Expect = 8e-25
Identities = 161/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813
||||| ||||| | ||| | ||||||| ||| | || | || |||||| | ||||||
Sbjct 135825 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 135766
Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873
||||||||||||||||||||| ||| ||||| | || |||||||| || ||
Sbjct 135765 TTAGATGTACCATTTGTTCCATGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 135706
Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933
| || |||||||| || ||| ||||| |||||| ||||| |||||||| ||
Sbjct 135705 ACACCAATTCCTCCAGCTGATTTGCTGATTATAGCACACTCCTTCAAAGTGTCATATATT 135646
Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974
||||| ||||||||||| |||| || | ||| |||||
Sbjct 135645 CCCTCAATACTATCATCTTTCATACACAGTAAAAAGCAGCT 135605
Score = 102 bits (112), Expect = 1e-16
Identities = 116/156 (74%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551
|||||||||||| || |||| | | |||||||| || |||||| ||| ||| ||
Sbjct 136310 CTCTCTTTCATAATGAATATACAGCTCCTCAAATTCTTCACCCCAACAATCTGCCAGTCC 136251
Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611
||| ||||||| ||||| | |||||||||| |||| || || | || ||| ||
Sbjct 136250 TGGAGATTCATTAGGACAGAATAATGACCACTGCCCATTACTCTGGACTCTTTGCATGAA 136191
Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 76647
|||||||| | |||||||||| ||||||||| ||
Sbjct 136190 AAGATCAGGCACCCATAGAGCATAAAATAGATCACG 136155
Score = 95.1 bits (104), Expect = 2e-14
Identities = 93/119 (78%), Gaps = 6/119 (5%)
Strand=Plus/Minus
Query 76088 ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 76147
|| |||| |||||| || |||||||||||||||||||| |||||||| | | ||| ||
Sbjct 137217 ATGAATGTATCTGCAAGCCCCTGAACTCCAATACCAATGGGTCTATGACGCAAATTTGAT 137158
Query 76148 ATTT---CAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCT 76203
||| ||| ||| || |||||| ||||||| ||| || ||||| || ||||||||
Sbjct 137157 CTTTTTGCAGTTTC---AACAGGGTAGTAATTAACATCAATTATTTTGTTAAGATTTCT 137102
>seq12755
Length=243795
Score = 125 bits (138), Expect = 1e-23
Identities = 150/204 (74%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813
||||| ||||| | ||||| ||||| | ||| | || | || |||||| | ||| ||
Sbjct 40244 CCTCCTTGATCAACATATCGAGCAGTATCATTGAACACCCGCAGCATTGGGACAATTCCA 40185
Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873
||||||||||||||||||||| ||||||||| || || |||||||| || |||
Sbjct 40184 TTAGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGAA 40125
Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933
| || |||||||| || ||| ||| | |||||| ||||| || ||||| ||
Sbjct 40124 ACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATATT 40065
Query 76934 CCCTCTATACTATCATCCATCATG 76957
|| || ||||||||||| |||||
Sbjct 40064 CCTTCAATACTATCATCTTTCATG 40041
Score = 87.8 bits (96), Expect = 3e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052
||| || ||||| || | || ||||| ||||||||||||||| ||| ||| | | |
Sbjct 39902 AGTGCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 39843
Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112
|| |||| ||| | | || || || | ||||||||| ||||| || | ||| ||
Sbjct 39842 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 39783
Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172
|||||||||||| | ||||| | ||| | | |||||| | || || | ||||
Sbjct 39782 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 39723
Query 77173 AGTTTTAAAACCAAAATA 77190
||||| || ||||| ||
Sbjct 39722 GGTTTTGAAGCCAAAGTA 39705
Score = 87.8 bits (96), Expect = 3e-12
Identities = 92/120 (77%), Gaps = 6/120 (5%)
Strand=Plus/Minus
Query 76088 ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 76147
|| |||| ||||| || |||||||||||||||||||| || ||||| | | ||| ||
Sbjct 41600 ATGAATGTGTCTGCAAGACCCTGAACTCCAATACCAATGGGCCTATGACGCAAATTTGAT 41541
Query 76148 ATTT---CAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTG 76204
||| ||| ||| || ||||| ||||||| ||| |||||||| || |||||||||
Sbjct 41540 CTTTTGGCAGTTTC---AACGGGGTAGTAATTAACATCAATAATTTTGTTAAGATTTCTG 41484
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 75736 CAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAA 75795
||| ||||| ||| | |||||||| ||||||||| || | ||||||| || || |
Sbjct 42224 CAAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAG 42165
Query 75796 AATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCAT 75854
||| ||| |||||||||||| ||||||||||| | ||||| |||||| | ||||
Sbjct 42164 AATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT 42106
>seq25332
Length=434290
Score = 120 bits (132), Expect = 4e-22
Identities = 159/221 (72%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 76754 CCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCG 76813
||||| ||||| | ||| | ||||||| ||| | || | || |||||| | ||||||
Sbjct 185398 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 185457
Query 76814 TTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGAT 76873
||||||||||||||||||||| ||| ||||| | || |||||||| || ||
Sbjct 185458 TTAGATGTACCATTTGTTCCACGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 185517
Query 76874 AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATG 76933
| || |||||||| || ||| ||| | |||||| ||||| |||||||| ||
Sbjct 185518 ACACCAATTCCTCCAGCTGATTTGCTGATAATAGCACACTCCTTCAAAGTGTCATATATT 185577
Query 76934 CCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCT 76974
||||| ||||| ||||| |||| || | ||| |||||
Sbjct 185578 CCCTCAATACTGTCATCTTTCATACACAGTAAAAAGCAGCT 185618
Score = 105 bits (116), Expect = 1e-17
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551
|||||||||||| || |||| | | |||||||| || |||||| ||| ||| ||
Sbjct 184913 CTCTCTTTCATAATGAATATACAGCTCCTCAAATTCTTCACCCCAACAATCTGCCAGTCC 184972
Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAA 76611
||| ||||||| ||||| | |||||||||| |||| || || | || ||||||
Sbjct 184973 TGGAGATTCATTAGGACAGAATAATGACCACTGCCCATTACTCTGGACTCTTTGCATAAA 185032
Query 76612 GAGATCAGGTATCCATAGAGCAATAAATAGATCTCG 76647
|||||||| | |||||||||| ||||||||| ||
Sbjct 185033 AAGATCAGGCACCCATAGAGCATAAAATAGATCACG 185068
Score = 95.1 bits (104), Expect = 2e-14
Identities = 93/119 (78%), Gaps = 6/119 (5%)
Strand=Plus/Plus
Query 76088 ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 76147
|| |||| |||||| || |||||||||||||||||||| |||||||| | | ||| ||
Sbjct 184001 ATGAATGTATCTGCAAGCCCCTGAACTCCAATACCAATGGGTCTATGACACAAATTTGAT 184060
Query 76148 ATTT---CAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCT 76203
||| ||| ||| || |||||| ||||||| ||| || ||||| || ||||||||
Sbjct 184061 TTTTTTGCAGTTTC---AACAGGGTAGTAATTAACATCAATTATTTTGTTAAGATTTCT 184116
>seq28581
Length=397638
Score = 113 bits (124), Expect = 6e-20
Identities = 289/439 (66%), Gaps = 6/439 (1%)
Strand=Plus/Plus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| || || || || || | |||||||| ||||| ||||| |||| |||||| || |
Sbjct 33792 TTCTGATACTCTCCAACTCTCTTCTCGAAGAAATTGGTTTTCCCTTGCAATGAAATTAGT 33851
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| ||||||| || |||| |||| || ||||| | | ||||| || | |
Sbjct 33852 TCCATCCAATCAAAAGGGTTAGCCGCATTGTACATTTTGCCATACCCTAAAGCTCCTAAC 33911
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
| | ||| |||||||| || || || |||||| |||| |||||| || | |
Sbjct 33912 AACCGATCCGCAACGAACTCAATGTATTGACTCATCAACTCACCATTCATCCCAACTAAC 33971
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578
| || ||||| || | |||||| || ||| || ||||| | |||
Sbjct 33972 GCGCAAGGAAGAGCGTCGCATACAAACTCCCTCTCTATATACACCGCATCACTCACTATT 34031
Query 46579 GATGTTACTGTTTCCTCACTTGG---TGGATGCATCAAATGTTTAAACATTAAACATGCA 46635
| || || |||||| | || || | | | | ||| || || |||
Sbjct 34032 CCCTTCACGCGCTCTTCACTTAGCTTTGACTGAAGGAGAGAGT---ACAGCAAGCAAGCA 34088
Query 46636 AAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGC 46695
|| || ||||| || |||||||||| | || || ||||| || || || | ||||||
Sbjct 34089 AAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTTAATCCAGGC 34148
Query 46696 ATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCT 46755
|||| || |||||||| | ||||||||| || |||| || || || |||||||||
Sbjct 34149 ATTAACCCGCGCTTTTTTAACCAAAATATCGCGCAGAAACTGCCGGAGAAAAATATGCCT 34208
Query 46756 TCTACAGCCGCGAATGCGA 46774
||||| ||||| ||||
Sbjct 34209 TCTACGCAAGCGAAAGCGA 34227
>seq7920
Length=357604
Score = 96.9 bits (106), Expect = 5e-15
Identities = 191/283 (67%), Gaps = 0/283 (0%)
Strand=Plus/Minus
Query 46923 CATTTCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGT 46982
||| || || || || ||||| ||||| || || || || |||||| | || || |
Sbjct 357604 CATCTCGGAGTGGATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGA 357545
Query 46983 AATCTGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGC 47042
||||| |||||| | || || ||| | |||||| ||||| ||||| ||
Sbjct 357544 GATCTGGACCTCTTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGC 357485
Query 47043 AGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCA 47102
|| ||||| || | || || |||| || | | ||||||| || || | | |||
Sbjct 357484 GGCGAAAAAGGCGAGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCA 357425
Query 47103 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTT 47162
|| | | ||| || | ||| ||||| || || ||||| || ||||| || |||||
Sbjct 357424 GTGACGAAGATCGGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTT 357365
Query 47163 TTTATACATATTCCATATATCACGATATTGGATCGGAAAAATA 47205
|| ||||| | ||||| || | |||||||||||||| |||
Sbjct 357364 CTTGTACATTTCCCATACTTCTGGGTATTGGATCGGAAACATA 357322
>seq8664
Length=49552
Score = 89.7 bits (98), Expect = 7e-13
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 76816 AGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAG 76875
||||||||||||||||||| ||||||||| || || |||||||| || ||| |
Sbjct 45178 AGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGAAAC 45119
Query 76876 GCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCC 76935
|| |||||||| || ||| ||| | |||||| ||||| || ||||| || ||
Sbjct 45118 ACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATATTCC 45059
Query 76936 CTCTATACTATCATCCATCATG 76957
|| ||||||||||| |||||
Sbjct 45058 TTCAATACTATCATCTTTCATG 45037
Score = 87.8 bits (96), Expect = 3e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052
||| || ||||| || | || ||||| ||||||||||||||| ||| ||| | | |
Sbjct 44898 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 44839
Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112
|| |||| ||| | | || || || | ||||||||| ||||| || | ||| ||
Sbjct 44838 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 44779
Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172
|||||||||||| | ||||| | ||| | | |||||| | || || | ||||
Sbjct 44778 CATATGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 44719
Query 77173 AGTTTTAAAACCAAAATA 77190
||||| || ||||| ||
Sbjct 44718 GGTTTTGAAGCCAAAGTA 44701
Score = 87.8 bits (96), Expect = 3e-12
Identities = 147/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052
||| || ||||| || | || ||||| ||||||||||||||| ||| ||| | | |
Sbjct 49323 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 49264
Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112
|| |||| ||| | | || || || | ||||||||| ||||| || | ||| ||
Sbjct 49263 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 49204
Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172
||| |||||||| | ||||| | ||| | | |||||| | || || | ||||
Sbjct 49203 CATGTGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 49144
Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 77205
||||| || ||||| || | ||| ||||||
Sbjct 49143 GGTTTTGAAGCCAAAGTAATCGTAGTCAAAGTC 49111
>seq23340
Length=555426
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 75736 CAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAA 75795
||| ||||| ||| | |||||||| ||||||||| || | ||||||| || || |
Sbjct 1846 CAAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAG 1787
Query 75796 AATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCAT 75854
||| ||| |||||||||||| ||||||||||| | ||||| |||||| | ||||
Sbjct 1786 AATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT 1728
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712669268608320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |