Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq25 116 6e-21 seq23 113 7e-20 seq231 104 3e-17 seq10 104 3e-17 seq19 98.7 1e-15 seq11 95.1 2e-14 seq48 89.7 8e-13 seq1 89.7 8e-13 seq18 86.0 9e-12 >seq25 Length=50193149 Score = 116 bits (128), Expect = 6e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | | |||||||| | |||||| || || ||||||||||| | | Sbjct 28160489 CCACCCCGAAGGCGGAGAACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCA 28160430 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| || | ||||||||||||||||||||||||||| || || || || Sbjct 28160429 AGAGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGG 28160370 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| || || Sbjct 28160369 ATTCCTTCTTTGTCCTG 28160353 >seq23 Length=61753794 Score = 113 bits (124), Expect = 7e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | | |||||||| | |||||| || || ||||||||||| | | Sbjct 39553985 CCACCACGAAGGCGGAGAACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCA 39554044 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| || | ||| || | ||||||||||||||||||||||||||| || || || || Sbjct 39554045 AGAGTCCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGG 39554104 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| || || Sbjct 39554105 ATTCCTTCTTTGTCCTG 39554121 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | ||| | || |||||||| | |||||||| ||| || || ||||| |||| Sbjct 11030814 CCACCACGAAGACGCAACACCAAATGGAGGGTAGATTCCTTTTGA-ATGTTATAGTCTGC 11030756 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| ||||||| ||| || | |||||| ||||||||||| || || ||||| || || || Sbjct 11030755 AAGGGTTCTGCCATCTTCAAGTTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGG 11030696 Query 146170 AATTCCTTCTTTATCTTG 146187 || || || || || || Sbjct 11030695 GATGCCCTCCTTGTCCTG 11030678 >seq231 Length=354869 Score = 104 bits (114), Expect = 3e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 |||||||| ||||| ||||| || | || | ||| || || || || |||||||| Sbjct 72337 GTTCCACCCCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 72278 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | || |||| || ||| || | ||| || |||||||||||||| || |||||||| ||| Sbjct 72277 GCTAGGGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 72218 Query 146168 GGAATTCCTTCTTTATCTTG 146187 || || ||||||||||| || Sbjct 72217 GGGATGCCTTCTTTATCCTG 72198 Score = 104 bits (114), Expect = 3e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||| |||||||| ||||| || | || | ||| || || || || |||||||| Sbjct 77517 GTTCCTCCTCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 77458 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | || |||| || ||| |||| ||| || |||||||||||||| || |||||||| ||| Sbjct 77457 GCTAGGGTTCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 77398 Query 146168 GGAATTCCTTCTTTATCTTG 146187 || || || |||||||| || Sbjct 77397 GGGATGCCCTCTTTATCCTG 77378 >seq10 Length=91128445 Score = 104 bits (114), Expect = 3e-17 Identities = 107/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||| |||||||| ||||| || | || | ||| || || || || |||||||| Sbjct 62680799 GTTCCTCCTCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 62680740 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | || |||| || ||| |||| ||| || |||||||||||||| || |||||||| ||| Sbjct 62680739 GCTAGGGTTCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 62680680 Query 146168 GGAATTCCTTCTTTATCTTG 146187 || || || |||||||| || Sbjct 62680679 GGGATGCCCTCTTTATCCTG 62680660 Score = 100 bits (110), Expect = 4e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 146048 GTTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCT 146107 ||||| || ||||| ||||| || | || | ||| || || || || |||||||| Sbjct 62675523 GTTCCTCCCCTAAGCCTTAAAACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCA 62675464 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 | || |||| || ||| || | ||| || |||||||||||||| || |||||||| ||| Sbjct 62675463 GCGAGGGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGA 62675404 Query 146168 GGAATTCCTTCTTTATCTTG 146187 || || ||||||||||| || Sbjct 62675403 GGGATGCCTTCTTTATCCTG 62675384 >seq19 Length=70911690 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||| ||||| | ||||| || | ||||| ||||| ||||||||||||| | Sbjct 3137496 CCTCCTCGAAGTCGGAGCACCAAGTGGAGGGTAGACTCTTTCTGGATATTATAATCTGCA 3137555 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || || | ||| || | ||||| |||||||||||||| || |||||||| || ||| Sbjct 3137556 AGTGTCCTACCATCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 3137615 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || || || Sbjct 3137616 ATCCCTTCCTTGTCCTG 3137632 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | || | ||| |||||||| | || ||||| || || ||||| || | | Sbjct 3137724 CCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCA 3137783 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||||| || ||| || | || ||||||||||||||||| || ||||| ||||| || Sbjct 3137784 AGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGG 3137843 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| ||||| || Sbjct 3137844 ATCCCTTCCTTATCCTG 3137860 Score = 93.3 bits (102), Expect = 6e-14 Identities = 134/197 (68%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140 ||||| ||||| || || ||||||| ||| || || | ||| || | ||||||||| Sbjct 3137982 GTAGACTCTTTCTGGATGTTGTAATCTGCAAGTGTCCTACCATCTTCGAGTTGTTTTCCG 3138041 Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNN 146200 ||||||||||| || |||||||| || ||||| ||||| || ||||| Sbjct 3138042 GCAAAAATCAACCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCTTGGATCTTGGCCTTG 3138101 Query 146201 NNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTT 146260 ||||| |||||||| || || || ||||| || || || || | ||| Sbjct 3138102 ACATTATCAATTGTATCAGAACTTTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGAGTT 3138161 Query 146261 TTAATGAATATTTGCAT 146277 || | |||||| ||||| Sbjct 3138162 TTCACGAATATCTGCAT 3138178 Score = 93.3 bits (102), Expect = 6e-14 Identities = 134/197 (68%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 146081 GTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCA 146140 ||||| ||||| || || ||||||| ||| || || | ||| || | ||||||||| Sbjct 3138438 GTAGACTCTTTCTGGATGTTGTAATCTGCAAGTGTCCTACCATCTTCGAGTTGTTTTCCG 3138497 Query 146141 GCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATCTTGNNNNNNNNNNNNN 146200 ||||||||||| || |||||||| || ||||| ||||| || ||||| Sbjct 3138498 GCAAAAATCAACCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCTTGGATCTTGGCCTTG 3138557 Query 146201 NNNNNNNNNNNAGTATCTGAACTTTCTACTTCTAGTGTGATTGTTTTACCTGTTAATGTT 146260 ||||| |||||||| || || || ||||| || || || || | ||| Sbjct 3138558 ACATTATCAATTGTATCAGAACTTTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGAGTT 3138617 Query 146261 TTAATGAATATTTGCAT 146277 || | |||||| ||||| Sbjct 3138618 TTCACGAATATCTGCAT 3138634 Score = 93.3 bits (102), Expect = 6e-14 Identities = 105/138 (76%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || |||||||| | || |||||||| | || ||||| ||| || || ||||| || | Sbjct 3145474 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGA-ATGTTATAGTCCGC 3145532 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| || || | ||| || | || ||||||||||||||||| || ||||| || ||||| Sbjct 3145533 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGG 3145592 Query 146170 AATTCCTTCTTTATCTTG 146187 |||||| || || || || Sbjct 3145593 AATTCCCTCCTTGTCCTG 3145610 Score = 89.7 bits (98), Expect = 8e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || |||||||| | || |||||||| | || ||||| ||| || || ||||| || | Sbjct 3145018 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGA-ATGTTATAGTCCGC 3145076 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| || || | ||| || | || ||||||||||||||||| || ||||| || ||||| Sbjct 3145077 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGG 3145136 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| || || || || || Sbjct 3145137 AATCCCCTCCTTGTCCTG 3145154 Score = 89.7 bits (98), Expect = 8e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || |||||||| | || |||||||| | || ||||| ||| || || ||||| || | Sbjct 3145246 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGA-ATGTTATAGTCCGC 3145304 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| || || | ||| || | || ||||||||||||||||| || ||||| || ||||| Sbjct 3145305 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGG 3145364 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| || || || || || Sbjct 3145365 AATCCCCTCCTTGTCCTG 3145382 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||| ||||| ||| |||||||| | || |||||||| || ||||| |||| | Sbjct 3137268 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCTTTTTGGATGTTATAGTCTGCA 3137327 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || || | || || | || || || ||||||||||| || ||||| || |||||| Sbjct 3137328 AGTGTCCTCCCCTCCTCAAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 3137387 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || || || Sbjct 3137388 ATCCCCTCCTTGTCCTG 3137404 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 || |||||||| | || |||||||| | || ||||| ||| || || ||||| || | Sbjct 3144790 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGA-ATGTTATAGTCCGC 3144848 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| || || | ||| || | || ||||| ||||||||||| || ||||| || ||||| Sbjct 3144849 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 3144908 Query 146170 AATTCCTTCTTTATCTTG 146187 ||| || || || || || Sbjct 3144909 AATCCCCTCCTTGTCCTG 3144926 >seq11 Length=95484752 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | || || | || | ||| ||||| || ||||| ||||| | Sbjct 29435115 CCACCCCGAAGACGCAAGACAAGGTGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCC 29435056 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| || | ||| || |||||||| ||||| |||||||| ||||||||||| || ||| Sbjct 29435055 AAAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGGA 29434996 Query 146171 ATTCCTTCTTTATCTTG 146187 ||||||||||| || || Sbjct 29434995 ATTCCTTCTTTGTCCTG 29434979 >seq48 Length=1435396 Score = 89.7 bits (98), Expect = 8e-13 Identities = 104/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 ||||| | ||| | || |||||||| | ||||| || ||| || || ||||| |||| Sbjct 1250521 CCACCACGAAGACGCAACACCAAATGGAGGGTAGACTCCTTTTGA-ATGTTATAGTCTGC 1250463 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 ||| ||||||| ||| || | ||||| |||||||||||||| || ||||| || || || Sbjct 1250462 AAGGGTTCTGCCATCTTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGG 1250403 Query 146170 AATTCCTTCTTTATCTTG 146187 || || || || || || Sbjct 1250402 GATGCCCTCCTTGTCCTG 1250385 >seq1 Length=92291805 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||| ||||| || |||||||| | || ||||| || || |||||||| | | Sbjct 4396886 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 4396945 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || || | ||| || | || ||||||||||||||||| || ||||| || || || Sbjct 4396946 AGTGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 4397005 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 4397006 ATACCCTCCTTATCTTG 4397022 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | || | ||| |||||||| | || ||||| || || ||||| || | Sbjct 4397304 CCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCT 4397363 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||||| || ||| || | || ||||||||||||||||| || ||||| ||||| || Sbjct 4397364 AGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGG 4397423 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| ||||| || Sbjct 4397424 ATCCCTTCCTTATCCTG 4397440 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||| ||||| ||| || ||||| | || ||||| || || ||||| |||| | Sbjct 4402273 CCTCCTCGAAGTCGTAAAACTAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 4402332 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || || | ||| || | || ||||||||||||||||| || ||||| || |||||| Sbjct 4402333 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 4402392 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || || || Sbjct 4402393 ATCCCCTCCTTGTCCTG 4402409 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||| ||||| || |||||||| | || ||||| || || |||||||| | | Sbjct 4402501 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATCCGCA 4402560 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || || | ||| || | || ||||||||||||||||| || ||||| || || || Sbjct 4402561 AGTGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 4402620 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || |||||||| Sbjct 4402621 ATACCCTCCTTATCTTG 4402637 Score = 89.7 bits (98), Expect = 8e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||||||| | || |||||||| | || ||||| || || ||||| || | Sbjct 4408887 TTCCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAGTCCG 4408946 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 ||| || || | ||| || | || ||||| ||||||||||| || ||||| || |||| Sbjct 4408947 CAAGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAG 4409006 Query 146169 GAATTCCTTCTTTATCTTG 146187 ||||||| || || || || Sbjct 4409007 GAATTCCCTCCTTGTCCTG 4409025 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || |||| ||||| ||| || | ||| | || ||||| || || ||||| |||| | Sbjct 4396658 CCTCCTCGAAGTCGTAAAACTAGATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 4396717 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || || | ||| || | || ||||||||||||||||| || ||||| || |||||| Sbjct 4396718 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 4396777 Query 146171 ATTCCTTCTTTATCTTG 146187 || || || || || || Sbjct 4396778 ATCCCCTCCTTGTCCTG 4396794 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | || | ||| |||||||| | || ||||| || || ||||| || | Sbjct 4402919 CCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCT 4402978 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||||| || ||| || | || ||||||||||||||||| || ||||| ||| | || Sbjct 4402979 AGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCAGTGGG 4403038 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| ||||| || Sbjct 4403039 ATCCCTTCCTTATCCTG 4403055 >seq18 Length=57801308 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 ||||| | ||| | || || | || | ||| ||||| || ||||| ||||| | Sbjct 49489141 CCACCACGAAGACGCAAGACAAGGTGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCC 49489082 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 | ||| || | ||| || || ||||| ||||| |||||||| ||||||||||| || ||| Sbjct 49489081 AAAGTCCTTCCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGGA 49489022 Query 146171 ATTCCTTCTTTATCTTG 146187 || |||||||| || || Sbjct 49489021 ATCCCTTCTTTGTCCTG 49489005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743441377756160