Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05]
9,148 sequences; 2,189,140,010 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq168 107 2e-18
seq11 105 7e-18
seq27 104 2e-17
seq18 100 3e-16
seq17 96.9 4e-15
seq1 95.1 1e-14
seq14 91.5 1e-13
seq6 91.5 1e-13
seq4 91.5 1e-13
seq19 89.7 5e-13
seq48 86.0 6e-12
seq13 86.0 6e-12
seq3 84.2 2e-11
seq2 84.2 2e-11
seq23 82.4 8e-11
>seq168
Length=529997
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || || || |||||||| ||| || || | ||||||||||||||| ||
Sbjct 131343 GTTGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCGAGTTGTTTTCCG 131284
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||| ||||||||||| || || || |||||||| ||||| || || |||
Sbjct 131283 GCAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTCGCTTTA 131224
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | |||||| | | || || || | ||| | |||||||| ||||| |||
Sbjct 131223 ACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTGATTGTCTTGCCAGTCAAGGTT 131164
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| ||||||||
Sbjct 131163 TTCACGAAGATTTGCAT 131147
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| ||||| | ||| | ||| | ||||| || ||||| || || || |||||||||
Sbjct 131601 CCACCTCGAAGACGTAGAACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCT 131542
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | | ||| |||||||| || || || |||| ||||||||||| || || ||
Sbjct 131541 AAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 131482
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|||||||| ||||| ||||| ||| | | || | |||||| | | || ||
Sbjct 131481 ATGCCTTCCTTGTCTTGGATTTTGGCTTTCACGTTGTCGATCGTGTCAGAGCTCTCGACC 131422
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | |||||| ||||| | || || ||||| ||||||||
Sbjct 131421 TCGAGAGTGATCGTCTTTCCGGTAAGCGTCTTAACGAAGATTTGCAT 131375
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || ||||| |||||||||||| || || | ||||||||| ||||| ||
Sbjct 131115 GTTGACTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGTTTTCCG 131056
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||||||||| ||||| || ||||| |||||||| || || ||||| ||
Sbjct 131055 GCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTC 130996
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||| || | | || || || | ||| | |||||||||||| | ||
Sbjct 130995 ACGTTGTCGATCGTATCGGAGCTCTCGACCTCGAGAGTGATCGTCTTGCCGGTTAGAGTC 130936
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| || |||||
Sbjct 130935 TTAACGAAGATCTGCAT 130919
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || | ||| | ||| | |||| || || || ||||| || ||||||| |
Sbjct 131829 CCACCACGAAGACGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAATTAGCC 131770
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || || ||||| || ||||| |||||| | |||| | ||||||| | || ||
Sbjct 131769 AAAGTCCTTCCATCTTCCAGCTGTTTCCCAGCAAAAATCAACCTTTGCTGACCTGGTGGA 131710
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| ||| || ||| | | || | ||| |||| | || |||
Sbjct 131709 ATTCCTTCTTTGTCCTGAATCTTCGCTTTCACGTTATCAATCGTATCCGAGCTCTCCACT 131650
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | ||||| |||||||| || || ||||| || |||||
Sbjct 131649 TCTAAAGTAATGGTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 131603
>seq11
Length=95484752
Score = 105 bits (116), Expect = 7e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031
||| || ||||| | || || || || || |||||||||||| || |||| |||
Sbjct 29434873 CAATACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCGTC 29434814
Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
||||||||||| || ||| | || || | |||||| || || || |||||||| |||||
Sbjct 29434813 CTCGAGTTGTTTCCCGGCAAATATGAGCCTTTGCTGGTCTGGTGGGATGCCTTCCTTGTC 29434754
Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151
|| ||| || | | || | ||||| | | ||| ||||| | ||| | ||
Sbjct 29434753 TTGGATCTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACTTCCAAAGTTATGGT 29434694
Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||||||||| ||||| ||||| || |||||
Sbjct 29434693 CTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 29434661
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| || |||| ||| | || | ||| | || || || || || ||||||||||||
Sbjct 29434660 GCCACCACGTAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGC 29434601
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| || | |||||||| ||||| || || |||| |||||||| || || || ||
Sbjct 29434600 CAAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGG 29434541
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||| ||||| ||||| || | | || | |||||| | || ||
Sbjct 29434540 GATCCCTTCCTTGTCTTGGATTTTCGCCTTAACGTTGTCGATCGTGTCGGAACTCTCGAC 29434481
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||| | || | ||||||||||||| || || ||||| || |||||
Sbjct 29434480 TTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 29434433
>seq27
Length=3408634
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || || ||||| | || | ||| | || || || || || |||||||| ||| |
Sbjct 2140295 CCGCCACGCAAACGAAGGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGCC 2140236
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | |||||| |||||||| || || |||| ||||||||||| || || ||
Sbjct 2140235 AAGGTACGGCCGTCTTCAAGTTGTTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGG 2140176
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|||||||| ||||| || || || | | || | |||||| | | || ||
Sbjct 2140175 ATGCCTTCCTTGTCTTGGATCTTCGCCTTAACGTTGTCGATCGTGTCGGAGCTCTCGACC 2140116
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | |||||||||||||| ||||| ||||| ||||||||
Sbjct 2140115 TCGAGAGTGATTGTCTTGCCGGTCAAGGTTTTCACGAAGATTTGCAT 2140069
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| ||||| | ||| | ||| | ||||| || ||||| || || || |||||||||
Sbjct 2140523 CCACCTCGAAGACGTAGAACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCT 2140464
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | | ||| |||||||| || || || |||| ||||||||||| || || ||
Sbjct 2140463 AAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 2140404
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|||||||| ||||| ||||| ||| | | || | |||||| | | || ||
Sbjct 2140403 ATGCCTTCCTTGTCTTGGATTTTGGCTTTCACGTTGTCGATCGTGTCAGAGCTCTCGACC 2140344
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | ||| | |||||| || || | || || ||||| ||||||||
Sbjct 2140343 TCGAGAGTGATCGTCTTTCCCGTAAGCGTCTTAACGAAGATTTGCAT 2140297
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| || || ||||| |||||||||||| || || | ||| || || ||||| ||
Sbjct 2140037 GTTGACTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCCTCAAGCTGTTTTCCG 2139978
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||||||||| ||||| || ||||| |||||||| || || ||||| ||
Sbjct 2139977 GCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGTCTTC 2139918
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | |||||| | | || || || | ||| | |||||||||||| | ||
Sbjct 2139917 ACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTGATCGTCTTGCCGGTTAGAGTC 2139858
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| || |||||
Sbjct 2139857 TTGACGAAGATCTGCAT 2139841
>seq18
Length=57801308
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 142972 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTC 143031
||| || ||||| | || || || || || |||||||||||| || |||| |||
Sbjct 49488899 CAATACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCGTC 49488840
Query 143032 TTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTC 143091
||||||||||| || ||| |||| || | |||||| || || || |||||||| |||||
Sbjct 49488839 CTCGAGTTGTTTCCCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATGCCTTCCTTGTC 49488780
Query 143092 GGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGT 143151
|| || || | | || | ||||| | | ||| ||||| | ||| | ||
Sbjct 49488779 TTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACTTCCAAAGTTATGGT 49488720
Query 143152 CTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
||||||||||| || || ||||| || |||||
Sbjct 49488719 CTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 49488687
>seq17
Length=39386523
Score = 96.9 bits (106), Expect = 4e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||||||| || || | ||| ||||| ||||| ||
Sbjct 31748535 GTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCG 31748476
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| |||||| ||
Sbjct 31748475 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTC 31748416
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | || ||||| | || | ||||||||||| || |||
Sbjct 31748415 ACATTGTCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTT 31748356
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 31748355 TTGACGAAGATCTGCATA 31748338
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || || || |||||| || || | |||||||| ||||| ||
Sbjct 31748763 GTGGATTCCTTCTGGATATTATAATCGGCCAGGGTACGGCCATCTTCGAGCTGTTTGCCG 31748704
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| |||||| |||
Sbjct 31748703 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTT 31748644
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | || ||||| | || | ||||||||||| || |||
Sbjct 31748643 ACATTATCGATGGTGTCAGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAAGTT 31748584
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 31748583 TTGACGAAGATCTGCATA 31748566
Score = 91.5 bits (100), Expect = 1e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
|||||| || | | |||||| | |||| || ||||| || || ||||| |||||
Sbjct 31749022 GCCTCCACGAAGCCTCAAAACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCAGC 31748963
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| || ||| || || || || || || ||| |||||| |||||| || || || ||
Sbjct 31748962 CAAGGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGGCGG 31748903
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
|| ||||| ||||| ||| || |||| | || | ||||||| || ||
Sbjct 31748902 GATCCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATGGTGTCCGAACTCTCCAC 31748843
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | |||||||||||||| ||||| ||||| || |||||
Sbjct 31748842 CTCCAAGGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 31748795
>seq1
Length=92291805
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|||||||| | || ||||||||||| | || ||||| ||||| ||||| || ||
Sbjct 4402273 CCTCCTCGAAGTCGTAAAACTAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 4402332
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| ||| || || || || || |||||| | |||| | ||||| || |||||
Sbjct 4402333 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 4402392
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || || ||||| |||||| ||| | | || | ||||||| | || ||
Sbjct 4402393 ATCCCCTCCTTGTCCTGAATTTTCGCTTTCACATTGTCAATGGTGTCCGAGCTCTCGACC 4402452
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | || || |||||||| || || |||||||| |||||
Sbjct 4402453 TCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 4402499
>seq14
Length=44799946
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
||||| || || | ||| | ||| | |||| |||||| ||||| || ||||| |||||
Sbjct 8847901 TGGCCACCACGGAGACGAAGAACAAGGTGAAGTGTAGACTCTTTCTGAATGTTATAATCA 8847960
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
|| || ||| ||||| | |||||| || ||| |||| || | ||||||||| ||
Sbjct 8847961 GCCAAAGTCCTCCCATCTTCCAATTGTTTGCCGGCAAAGATGAGCCTTTGCTGATCAGGT 8848020
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| || ||||| || || ||| ||| || | | || | || || | | |||
Sbjct 8848021 GGGATTCCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTATCGGAGCTTTCA 8848080
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| || | || | || ||||||||||| || || || || || |||||
Sbjct 8848081 ACCTCCAAGGTGATTGTTTTGCCGGTCAAAGTCTTGACAAAAATCTGCAT 8848130
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | | |||||| | |||| || ||||| ||||| || || ||||| |
Sbjct 8848132 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCC 8848191
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || ||| ||||| | |||||| ||||| |||||| ||| || || || || ||
Sbjct 8848192 AAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGG 8848251
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|||||||| ||||| ||| || || | | || | ||||| | || |||
Sbjct 8848252 ATGCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACT 8848311
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | ||||||||||| || ||||| || || ||||||||
Sbjct 8848312 TCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 8848358
>seq6
Length=79162310
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||||||| || || | |||||||| ||||| ||
Sbjct 21701698 GTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTTCCG 21701639
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| ||||| ||
Sbjct 21701638 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTC 21701579
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | || ||||| | || | ||||||||||| || |||
Sbjct 21701578 ACATTATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTT 21701519
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 21701518 TTGACGAAGATCTGCATA 21701501
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||||||| || || | ||| ||||| ||||| ||
Sbjct 21701470 GTGGATTCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCG 21701411
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| |||||| |||
Sbjct 21701410 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTT 21701351
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | || || || | || | ||||||||||| | |||
Sbjct 21701350 ACATTATCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTT 21701291
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| || |||||
Sbjct 21701290 TTGACGAAGATCTGCAT 21701274
>seq4
Length=78750349
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||||||| || || | |||||||| ||||| ||
Sbjct 57540814 GTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTTCCG 57540873
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| ||||| ||
Sbjct 57540874 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTC 57540933
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | || ||||| | || | ||||||||||| || |||
Sbjct 57540934 ACATTATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTT 57540993
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 57540994 TTGACGAAGATCTGCATA 57541011
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || |||||||||||| || || | ||| ||||| ||||| ||
Sbjct 57541042 GTGGATTCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCG 57541101
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| |||||| |||
Sbjct 57541102 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTT 57541161
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | || || || | || | ||||||||||| | |||
Sbjct 57541162 ACATTATCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTT 57541221
Query 143168 TTTACGAATATTTGCAT 143184
|| ||||| || |||||
Sbjct 57541222 TTGACGAAGATCTGCAT 57541238
Score = 82.4 bits (90), Expect = 8e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
|| ||||| || || || || |||||| || || | |||||||| ||||| ||
Sbjct 57540586 GTGGATTCCTTCTGGATATTATAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTGCCG 57540645
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
|| |||| ||||| ||||| || || || |||||||| ||||| ||||| ||
Sbjct 57540646 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTG 57540705
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | || ||||| | || | ||||||||||| || |||
Sbjct 57540706 ACATTGTCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTT 57540765
Query 143168 TTTACGAATATTTGCATA 143185
|| ||||| || ||||||
Sbjct 57540766 TTGACGAAGATCTGCATA 57540783
>seq19
Length=70911690
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|||||||| | || ||||| ||||| | || ||||||||||| ||||| || ||
Sbjct 3137268 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCTTTTTGGATGTTATAGTCTGCA 3137327
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||| ||| || || || || || || ||| | |||| | ||||| || |||||
Sbjct 3137328 AGTGTCCTCCCCTCCTCAAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 3137387
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| || || ||||| |||||| ||| | | || | ||||||| | || ||
Sbjct 3137388 ATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGACC 3137447
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | || || |||||||| || || |||||||| |||||
Sbjct 3137448 TCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 3137494
>seq48
Length=1435396
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 143047
||||| ||||| || |||||||| || | |||| || || ||||||||||||
Sbjct 1250263 GTAGACTCTTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGTTGTTTACCA 1250204
Query 143048 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 143107
||| |||| || | || || || ||||| || ||||||||||| || || ||
Sbjct 1250203 GCAAAGATAAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTG 1250144
Query 143108 AGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 143167
| | || | ||||| | | ||| ||||||| || | |||||||| || | |||
Sbjct 1250143 ATATTATCAATTGTGTCGGAGCTTTCCACTTCAAGGGTGATTGTCTTGCCAGTAAGGGTT 1250084
Query 143168 TTTACGAATATTTGCAT 143184
|| || |||||||||||
Sbjct 1250083 TTGACAAATATTTGCAT 1250067
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | || | || ||||| | || || || ||||| ||||||||||| |
Sbjct 1229526 CCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 1229467
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || ||||| ||||| ||||| ||| |||| || | ||||| || |||||
Sbjct 1229466 AGGGTATGGCCATCTTCTAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGG 1229407
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||||||||| || || || | | || | ||||||| | ||| ||
Sbjct 1229406 ATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCCGAGCTTTCCACC 1229347
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|||| || | ||||||||||| | || || || || |||||||||
Sbjct 1229346 TCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCATA 1229299
>seq13
Length=56485995
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | | |||||| | |||| || ||||| ||||| || || ||||| |
Sbjct 54271002 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCC 54270943
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || ||| ||||| | |||||| ||||| |||||| ||| || || || || ||
Sbjct 54270942 AAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGG 54270883
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| ||||| ||||| ||| || || | | || | ||||| | || |||
Sbjct 54270882 ATTCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACT 54270823
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | ||||||||||| || ||||| || || ||||||||
Sbjct 54270822 TCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 54270776
>seq3
Length=37363027
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 142988 GTAGATTCTTTTTGTATGTTGTAATC-GCTCATTGTGCTCGAGTCTTCGAGTTGTTTACC 143046
|| ||||| ||||| |||||||| || ||| | |||| |||||||||||| |||||
Sbjct 31841548 GTGGATTCCTTTTGGATGTTGTAGTCAGCTAAG-GTGCGGCCGTCTTCGAGTTGCTTACC 31841490
Query 143047 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTT 143106
|| |||| || ||||| || || || ||||||||||||||||| || || |||
Sbjct 31841489 GGCGAAGATGAGGCGTTGTTGGTCCGGGGGTATGCCTTCTTTGTCTTGGATCTTGGCTTT 31841430
Query 143107 TAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGT 143166
| | || | ||||| | | || || || | || | ||||| || || | ||
Sbjct 31841429 GACATTATCGATTGTGTCGGAAGACTCGACCTCTAGGGTTATGGTCTTCCCCGTTAGGGT 31841370
Query 143167 TTTTACGAATATTTGCAT 143184
||| ||||| || |||||
Sbjct 31841369 TTTCACGAAGATCTGCAT 31841352
>seq2
Length=106994729
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 156872 AATGCATCGGCCAAACCTTGAATGCCAATGCCGATGGGACGATGGCGCATATTAGAtttt 156931
|||| || || | ||| |||| ||||| || ||||| | ||| |||| ||| ||| ||
Sbjct 29497382 AATGTGTCTGCAAGACCCTGAACTCCAATACCAATGGGCCTATGACGCAAATTTGATCTT 29497323
Query 156932 tttGCAGTTTCAATAGGGTAGAAATTGCGATCAATAATTTTATT 156975
|| |||||||||| ||||||| |||| |||||||||||| ||
Sbjct 29497322 TTGGCAGTTTCAACAGGGTAGTAATTAACATCAATAATTTTGTT 29497279
>seq23
Length=61753794
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
||||| || | || | || ||||| | || || || ||||| ||||||||||| |
Sbjct 10996620 CCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGAATCCTTTTGGATGTTGTAATCAGCC 10996561
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| || | ||||| ||||| ||||| ||| |||| || | ||||| || |||||
Sbjct 10996560 AGGGTACGACCATCTTCTAGTTGCTTACCGGCAAAGATAAGCCCCTGCTGGTCTGGAGGG 10996501
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
|| |||| |||||| || || || | | || | ||||||| | ||| ||
Sbjct 10996500 ATCCCTTATTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCCGAGCTTTCCACC 10996441
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|||| || | ||||||||||| | || || || || |||||||||
Sbjct 10996440 TCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCATA 10996393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506956422903360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |