Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 7e-16 seq126 96.9 2e-15 seq5 96.9 2e-15 seq19 89.7 4e-13 seq14 87.8 1e-12 seq1 84.2 2e-11 seq168 82.4 5e-11 seq27 82.4 5e-11 seq25 82.4 5e-11 >seq23 Length=61753794 Score = 98.7 bits (108), Expect = 7e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||| | | || |||||||| || || ||| |||||||| ||||| || Sbjct 11031270 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGCA 11031211 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | | | || || | || ||||| ||||| ||||||| || ||||| | || Sbjct 11031210 AGAGTCCTCCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGG 11031151 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | ||| || |||||| || || || || || |||| || || | |||||| Sbjct 11031150 ATACCCTCCTTATCTTGGATCTTGGCCTTAACATTATCAACCGTGTCGGAGCTCTCCACC 11031091 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | |||||| ||||||||||| ||||| ||||||||||| ||||| Sbjct 11031090 TCCAACGTAATGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCAT 11031044 Score = 95.1 bits (104), Expect = 9e-15 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCT-CATCGTC 43971 |||||||| || || ||| || || |||||||||||| || | | | |||| || Sbjct 39554003 ACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCG-GCAAGAGTCCTTCCATCTTC 39554061 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGA 44031 | ||||||||| ||||| ||||| | ||| ||||| | || | |||||||| || Sbjct 39554062 AAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTCCTG 39554121 Query 44032 AATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTT 44091 ||| || ||| || || ||| ||||| | |||||| || | |||||||| || Sbjct 39554122 AATCTTGGCTTTCACATTATCAATGGTATCCGAACTCTCCACCTCCAAGGTAATTGTCTT 39554181 Query 44092 ACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || || | ||| || ||||| ||||||||| Sbjct 39554182 TCCAGTGAGAGTTTTGACAAAGATTTGCATG 39554212 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 43965 CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTT 44024 |||| |||||||||||||| ||||| || | || || ||||| |||| | |||||||| Sbjct 11030516 CATCCTCCAATTGTTTTCCAGCAAAGATAAGCCTCTGTTGGTCAGGAGGGATACCTTCTT 11030457 Query 44025 TATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAA 44084 | ||| || || ||||| || ||| || || | ||||| || | || | Sbjct 11030456 TGTCTTGGATCTTGGCCTTGACATTATCAATTGTGTCGGAGCTTTCCACTTCAAGGGTGA 11030397 Query 44085 TTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 |||| || || || | ||| || ||||||||||||||| Sbjct 11030396 TTGTCTTGCCAGTAAGAGTTTTGACAAATATTTGCATG 11030359 >seq126 Length=664146 Score = 96.9 bits (106), Expect = 2e-15 Identities = 155/220 (70%), Gaps = 11/220 (5%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTC-ATCGTC 43971 |||||||| || || ||||||||||||||||||||| || | | || ||| || Sbjct 151361 ACCAAATGAAGAGTTGACTCTTTTTGAATATTATAATCAGC-AAGAGTCCTTCCATCCTC 151419 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGT----CCTGAGGT-----ACACCTTC 44022 | ||||| ||||||||| || || | || ||| | || | || | ||| || Sbjct 151420 AAGTTGTTCTCCTGCAAAAATTAATCTTTACTGTTTGGGCCGGGGGGGGGGGATACCCTC 151479 Query 44023 TTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGT 44082 ||| || |||||| | ||| || ||| ||| ||||| || ||| || || | || Sbjct 151480 TTTTTCCTGAATTTTGTCTTTCACAATATCAATAGTATTTGAACTCTCAACTTCCAATGT 151539 Query 44083 AATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 ||||||||| || || | ||||| ||||||||||||||| Sbjct 151540 AATTGTTTTTCCAGTGAGGGTCTTGACAAATATTTGCATG 151579 >seq5 Length=56898656 Score = 96.9 bits (106), Expect = 2e-15 Identities = 154/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTC-ATCGTC 43971 |||||||| || || ||||||||||||||||||||| | || | | || ||| || Sbjct 10275918 ACCAAATGAAGAGTTGACTCTTTTTGAATATTATAATCAGT-AAGAGTCCTTCCATCCTC 10275976 Query 43972 CAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTG---AGGT---ACACCTTCTTT 44025 | ||||| ||||||||| || || | |||||||| | ||| | ||| ||||| Sbjct 10275977 AAGTTGTTCTCCTGCAAAAATTAATCTTTGCTGGTTTGGGCAAGGGGAGATACCCTCTTT 10276036 Query 44026 ATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAAT 44085 || |||||| | ||| || ||| ||| ||||| || ||| || || | ||||| Sbjct 10276037 TTCCTGAATTTTGTCTTTCACAATATCAATAGTATTTGAACTCTCAACTTCCAATGTAAT 10276096 Query 44086 TGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 |||||| || || | ||| ||||||||||| ||| Sbjct 10276097 TGTTTTTCCAGTAAGGATCTGGACAAATATTTGGATG 10276133 >seq19 Length=70911690 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| |||||||| || || |||||||| || ||||| || | Sbjct 3137268 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCTTTTTGGATGTTATAGTC-TGC 3137326 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | | || || | || || || ||||| ||||||| |||||||| |||| Sbjct 3137327 AAGTGTCCTCCCCTCCTCAAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 3137386 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| |||||| | ||| || || | ||| || Sbjct 3137387 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 3137446 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 3137447 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 3137494 Score = 86.0 bits (94), Expect = 4e-12 Identities = 159/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || | |||||| || || || |||||| || ||||||||||| | Sbjct 3137496 CCTCCTCGAAGTCGGAGCACCAAGTGGAGGGTAGACTCTTTCTGGATATTATAATC-TGC 3137554 Query 43955 AATTGACGCT--CATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012 || || | || |||| || | ||||| || ||||| ||||||| ||||| || | | Sbjct 3137555 AAGTGTC-CTACCATCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTG 3137613 Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072 | | ||||| || || || || ||| || | |||| || || | ||| | Sbjct 3137614 GAATCCCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAACGGTGTCAGAACTCTCAA 3137673 Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122 | || | ||||| || || ||||| | |||||||||||| ||||||||| Sbjct 3137674 CTTCCAAAGTAATAGTCTTTCCGGTGAGAGTCTTCACAAAAATTTGCATG 3137723 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||| | | || |||||||| || ||| || |||||||| ||||| || Sbjct 3144790 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCGCA 3144849 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 3144850 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 3144909 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | || || || || ||| || ||| || | ||| || || | |||||| Sbjct 3144910 ATCCCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACC 3144969 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||| || || ||||||||||| ||||| ||||| Sbjct 3144970 TCCAGGGTGATGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 3145016 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||| | | || |||||||| || ||| || |||||||| ||||| || Sbjct 3145018 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCGCA 3145077 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 3145078 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 3145137 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | || || || || ||| || ||| || | ||| || || | |||||| Sbjct 3145138 ATCCCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACC 3145197 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||| || || ||||||||||| ||||| ||||| Sbjct 3145198 TCCAGGGTGATGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 3145244 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 |||||||| | | || |||||||| || ||| || |||||||| ||||| || Sbjct 3145246 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCGCA 3145305 Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014 | | | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 3145306 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 3145365 Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074 | || || || || ||| || ||| || | ||| || || | |||||| Sbjct 3145366 ATCCCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACC 3145425 Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||| || || ||||||||||| ||||| ||||| Sbjct 3145426 TCCAGGGTGATGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 3145472 >seq14 Length=44799946 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 43930 CTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAA 43989 |||||| ||||| |||||||| || | | |||| ||||||||||| || ||||| Sbjct 8847939 CTCTTTCTGAATGTTATAATCAGCCAAAGTCCTCCCATCTTCCAATTGTTTGCCGGCAAA 8847998 Query 43990 TATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTAT-CTGAAATTTTTTGTTTGACCA 44048 || | || |||||| || | || | ||||| |||| ||||| | |||| | | || Sbjct 8847999 GATGAGCCTTTGCTGATCAGGTGGGATTCCTTCCTTATCCTGAA--TCTTTGCCTTAACA 8848056 Query 44049 TAG-CAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTTAAAGTCTTC 44107 | | ||| ||||| | || || || | || |||||||| ||||| |||||||| Sbjct 8848057 TTGTCAATGGTATCGGAGCTTTCAACCTCCAAGGTGATTGTTTTGCCGGTCAAAGTCTTG 8848116 Query 44108 ACAAATATTTGCAT 44121 ||||| || ||||| Sbjct 8848117 ACAAAAATCTGCAT 8848130 >seq1 Length=92291805 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| || | ||| || || || ||||| || ||||| || | Sbjct 4396658 CCTCCTCGAAGTCGTAAAACTAGATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 4396716 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 4396717 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGG 4396776 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| ||| || | |||| || || | ||| || Sbjct 4396777 AATCCCCTCCTTGTCCTGAATTTTCGCTTTCACATTGTCAACGGTGTCCGAGCTCTCGAC 4396836 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 4396837 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 4396884 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 43918 ATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTG 43977 ||| || ||| ||| || || ||||| ||||| || || |||| ||||| || Sbjct 4402068 ATGCAGTGTGGACTCCTTCTGGATATTGTAATCAGCTAGAGTTCGACCATCCTCCAACTG 4402127 Query 43978 TTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTT 44037 || || ||||||||||||| |||||||| | || | || || || || |||||| Sbjct 4402128 CTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGAATTTT 4402187 Query 44038 TTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGT 44097 ||| || | | | || |||| |||||| || | || |||||||| ||||| Sbjct 4402188 CGCTTTCACATTGTCGATCGTGTCTGAGCTCTCCACCTCCAGGGTGATTGTTTTCCCGGT 4402247 Query 44098 TAAAGTCTTCACAAATATTTGCAT 44121 || |||||||| ||||| ||||| Sbjct 4402248 CAAGGTCTTCACGAATATCTGCAT 4402271 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954 ||||||| | || ||| || ||||| || || || ||||| || ||||| || | Sbjct 4402273 CCTCCTCGAAGTCGTAAAACTAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTC-TGC 4402331 Query 43955 AATTGACG-CTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || || | | |||| || | || ||||| ||||| ||||||| |||||||| |||| Sbjct 4402332 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGG 4402391 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | || || || || |||||| ||| || | ||| || || | ||| || Sbjct 4402392 AATCCCCTCCTTGTCCTGAATTTTCGCTTTCACATTGTCAATGGTGTCCGAGCTCTCGAC 4402451 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || ||||||||||| || |||||||| ||||| ||||| Sbjct 4402452 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 4402499 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 43918 ATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTG 43977 ||| || ||| || || |||||||| || || ||| || |||| ||||| || Sbjct 4408684 ATGCAGAGTGGATTCCTTCTGAATATTGTAGTCTGCTAAAGTTCGACCATCCTCCAACTG 4408743 Query 43978 TTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTT 44037 ||||| ||||| ||||||| ||||||||| |||| | || || || || ||| || Sbjct 4408744 CTTTCCAGCAAAGATCAACCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCCTGAATCTT 4408803 Query 44038 TTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGT 44097 ||| || | ||| || || | |||||| || | || || ||||| || || Sbjct 4408804 AGATTTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGATGGTTTTCCCAGT 4408863 Query 44098 TAAAGTCTTCACAAATATTTGCAT 44121 || |||||||||||||| ||||| Sbjct 4408864 CAAGGTCTTCACAAATATCTGCAT 4408887 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 |||||||||||| || || || || ||||| ||||| || || || |||| Sbjct 4397318 TAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCTAGAGTTCGGCCATC 4397377 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 || | || ||||| ||||| ||||||| ||||||||| | || | ||||| ||||| Sbjct 4397378 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATC 4397437 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 ||| || || || || ||| ||||| | |||||| || | |||||| || Sbjct 4397438 CTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGT 4397497 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || || | || || ||||| || ||||| Sbjct 4397498 TTTTCCAGTGAGGGTTTTTACAAAAATCTGCAT 4397530 Score = 82.4 bits (90), Expect = 5e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968 |||||||||||| || || || || ||||| ||||| || || || |||| Sbjct 4402933 TAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCTAGAGTTCGGCCATC 4402992 Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028 || | || ||||| ||||| ||||||| ||||||||| | || | ||||| ||||| Sbjct 4402993 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCAGTGGGATCCCTTCCTTATC 4403052 Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088 ||| || || || || ||| ||||| | |||||| || | |||||| || Sbjct 4403053 CTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGT 4403112 Query 44089 TTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||| || || | || || ||||| || ||||| Sbjct 4403113 TTTTCCAGTGAGGGTTTTTACAAAAATCTGCAT 4403145 >seq168 Length=529997 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 43919 TGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGT 43978 || || ||| ||| ||||||||||| |||| || | |||| |||| ||| Sbjct 131805 TGAAGAGTGGACTCCTTTTGAATATTGTAATTAGCCAAAGTCCTTCCATCTTCCAGCTGT 131746 Query 43979 TTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTT 44038 || || ||||| ||||||| |||||| | | || | |||||||| || ||| || Sbjct 131745 TTCCCAGCAAAAATCAACCTTTGCTGACCTGGTGGAATTCCTTCTTTGTCCTGAATCTTC 131686 Query 44039 TGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTT 44098 ||| || || ||| ||||| | |||||| || | ||||| || |||||||| Sbjct 131685 GCTTTCACGTTATCAATCGTATCCGAGCTCTCCACTTCTAAAGTAATGGTCTTACCGGTC 131626 Query 44099 AAAGTCTTCACAAATATTTGCAT 44121 |||||||| || || || ||||| Sbjct 131625 AAAGTCTTGACGAAGATCTGCAT 131603 >seq27 Length=3408634 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 43919 TGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCCAATTGT 43978 || || ||| ||| ||||||||||| ||||| || | | || |||| |||| Sbjct 2140727 TGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCGTCTTCCAGTTGT 2140668 Query 43979 TTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAAATTTTT 44038 || || ||||| ||||||| |||||| || | || | |||||||| || | | || Sbjct 2140667 TTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATCCCTTCTTTCTCCTGACTCTTC 2140608 Query 44039 TGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTACCGGTT 44098 ||| | || ||| ||||| | |||||| || | ||||| || |||||||| Sbjct 2140607 GCTTTCGCGTTATCAATCGTATCCGAGCTCTCCACTTCTAAAGTAATCGTCTTACCGGTC 2140548 Query 44099 AAAGTCTTCACAAATATTTGCAT 44121 |||||||| || || || ||||| Sbjct 2140547 AAAGTCTTGACGAAGATCTGCAT 2140525 >seq25 Length=50193149 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||||||| || || ||| || || |||||||||||| | | |||| || Sbjct 28160471 ACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCAAGAGTTCTTCCATCTTCA 28160412 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 | ||||||||| ||||| ||||| | ||| ||||| | || | |||||||| || | Sbjct 28160411 AGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTCCTGA 28160352 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||| || | ||| ||||| | ||| || || | |||||||| || Sbjct 28160351 ATCTTGGCTTTCACATTGTCAATGGTATCCGAACTCTCGACCTCCAAGGTAATTGTCTTT 28160292 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCATG 44122 || || | ||| || ||||| ||||||||| Sbjct 28160291 CCAGTGAGAGTTTTGACAAAGATTTGCATG 28160262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354738045401904