Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq24 104 2e-17 seq15 102 7e-17 seq6 98.7 8e-16 seq4 98.7 8e-16 seq48 96.9 3e-15 seq19 93.3 4e-14 seq17 89.7 4e-13 seq1 89.7 4e-13 seq13 86.0 5e-12 seq18 84.2 2e-11 seq14 82.4 6e-11 >seq24 Length=55877068 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 ||| || || |||||| |||||| || |||||||||||||||||| || | ||||| Sbjct 24584289 CACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCCAATGTGCGGCCATCCTC 24584230 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || |||||||| || | || | | ||||| || || | | |||||||||| Sbjct 24584229 AAGTTGCTTACCAGCGAAGATCAGCCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTG 24584170 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || ||||| | | || ||||| | | |||| ||| | ||| ||||| || Sbjct 24584169 AATCTTGGCCTTGACATTGTCAATCGTATCAGAACTCTCCACCTCCAATGTGATGGTCTT 24584110 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || || |||||||| ||||| Sbjct 24584109 TCCGGTGAGGGTCTTGACAAAAATTTGCAT 24584080 >seq15 Length=91555666 Score = 102 bits (112), Expect = 7e-17 Identities = 149/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576 |||||| || |||||| |||||| || ||||||||||||||||| || | ||||| Sbjct 15031939 CACTAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCCAACGTGCGGCCATCCTC 15031998 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || |||||||| || | || || | ||||| || || | | |||||||||| Sbjct 15031999 AAGTTGCTTACCAGCGAAGATCAACCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTG 15032058 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| || ||| | | | || ||||| | | |||| ||| | ||| ||||| || Sbjct 15032059 AATCTTGGCCTTTACATTGTCAATAGTATCAGAACTCTCCACCTCCAATGTGATGGTCTT 15032118 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 |||||||| || || || ||||| |||||| Sbjct 15032119 TCCGGTGAGGGTCTTGACGAAAATTTGCATC 15032149 >seq6 Length=79162310 Score = 98.7 bits (108), Expect = 8e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| ||||| || ||||||| ||||| || ||| || | Sbjct 21701464 TCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 21701405 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | ||||||||| |||||| ||| | | Sbjct 21701404 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTTACATTA 21701345 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | ||| ||||| || ||||| || ||||| || ||||| || Sbjct 21701344 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 21701285 Query 48716 AAAATCTGCATCGT 48729 || ||||||||||| Sbjct 21701284 AAGATCTGCATCGT 21701271 >seq4 Length=78750349 Score = 98.7 bits (108), Expect = 8e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| |||||||||||||| ||||| || ||||||| ||||| || ||| || | Sbjct 57541048 TCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 57541107 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | ||||||||| |||||| ||| | | Sbjct 57541108 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTTACATTA 57541167 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | ||| ||||| || ||||| || ||||| || ||||| || Sbjct 57541168 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 57541227 Query 48716 AAAATCTGCATCGT 48729 || ||||||||||| Sbjct 57541228 AAGATCTGCATCGT 57541241 >seq48 Length=1435396 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCT--CGTCCT 48575 || ||||| || || |||||||||||||||||| || || || |||| || | || | Sbjct 1229964 ACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGC-AAGTGTC-CTGCCATCAT 1229907 Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635 | ||||||||||| || |||| || | ||| || || || | || |||||||||| Sbjct 1229906 CAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTTGTCCT 1229847 Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695 ||||| ||||| | | || || ||| ||| || | || ||||||| Sbjct 1229846 GGATTTTGGCCTTGACATTGTCAATAGTGTCGAAGCTCTCAACTTCCAAGGTGATGGTTT 1229787 Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 | ||||| ||||| ||||||||||||||||| Sbjct 1229786 TCCCGGTAAGAGTCTTCACAAAAATCTGCAT 1229756 >seq19 Length=70911690 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573 |||||| ||||| || || ||||| |||||||| || || || | ||| | || Sbjct 3137738 TAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCAAGAGTTCGGCCATC 3137797 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 || |||||||| || | |||| || | |||||| ||| || | | |||||| || Sbjct 3137798 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATC 3137857 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | ||| || ||| | | | || ||||| | | |||| ||| | ||| || || Sbjct 3137858 CTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAATGTAATAGT 3137917 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| |||||||| ||||| ||||||||||||||| Sbjct 3137918 TTTTCCGGTGAGGGTTTTTACAAAAATCTGCATC 3137951 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| || ||||| || || || ||||| ||||| || || || Sbjct 3137268 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCTTTTTGGATGTTATAGTCTGC- 3137326 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| ||| | |||| || | |||||| || || Sbjct 3137327 AAGTGTCCTCCCCTCCTCAAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 3137386 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| |||| | | ||||| || | ||| Sbjct 3137387 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGAC 3137446 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 3137447 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 3137495 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTC 48573 || || ||||| || ||| |||||||||||||| || || | ||| ||| | | | || Sbjct 3145489 AAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCG-CAAGTGTCCTCCCATC 3145547 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 ||| |||||||| || | |||| || | |||||| || || | | |||||||| Sbjct 3145548 CTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATTCCCTCCTTGTC 3145607 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | ||| ||| || | | | ||||| || | ||| ||| | ||||||||| Sbjct 3145608 CTGAATCTTCGCTTTAACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAGTGTTATGGT 3145667 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 |||||| || | || || ||||| ||||||||| Sbjct 3145668 TTTACCAGTCAAGGTCTTAACAAATATCTGCATC 3145701 >seq17 Length=39386523 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || ||||||||||| ||||| || ||||||| ||||| || ||| || | Sbjct 31748301 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 31748242 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | ||||||||| |||||| ||| | | Sbjct 31748241 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTG 31748182 Query 48656 GCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACA 48715 | ||||| || | | ||| ||||| || ||||| || ||||| || ||||| || Sbjct 31748181 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 31748122 Query 48716 AAAATCTGCATC 48727 || ||||||||| Sbjct 31748121 AAGATCTGCATC 31748110 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | ||| || || | ||||| || ||||| || ||||| ||||||||| Sbjct 31749021 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCAGCC 31748962 Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619 || | | | ||||| |||||||| || | | || ||||| || || || ||| Sbjct 31748961 AAGGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGGCGGG 31748902 Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679 | | |||||||||| ||| ||| ||| | | | ||||| || | | |||| | Sbjct 31748901 ATCCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATGGTGTCCGAACTCTCCACC 31748842 Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || | || ||||| || ||||| | |||||||| || |||||||| Sbjct 31748841 TCCAAGGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 31748795 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAA 48595 ||||| || ||||||||||| ||||| || ||||||| ||||| || ||| || | Sbjct 31748529 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 31748470 Query 48596 ATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGAC 48655 || | ||||||||| || || | | ||||||||| |||||| ||| | | Sbjct 31748469 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTG 31748410 Query 48656 GCTATGGTATCGGTAGACTC-CGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | ||||| |||| || ||| || | |||| || ||||| || ||||| | ||||| | Sbjct 31748409 TCGATGGTGTCGG-AG-CTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGA 31748352 Query 48714 CAAAAATCTGCAT 48726 | || |||||||| Sbjct 31748351 CGAAGATCTGCAT 31748339 >seq1 Length=92291805 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573 |||||| ||||| || || ||||| |||||||| || || || | ||| | || Sbjct 4402933 TAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCTAGAGTTCGGCCATC 4402992 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 || |||||||| || | |||| || | |||||| |||| || | | |||||| || Sbjct 4402993 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCAGTGGGATCCCTTCCTTATC 4403052 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | ||| || ||| | | | || ||||| | | |||| ||| | || || || Sbjct 4403053 CTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGT 4403112 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| || ||||| ||||| ||||||||||||||| Sbjct 4403113 TTTTCCAGTGAGGGTTTTTACAAAAATCTGCATC 4403146 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTC 48573 |||||| ||||| || || ||||| |||||||| || || || | ||| | || Sbjct 4397318 TAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCTAGAGTTCGGCCATC 4397377 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 || |||||||| || | |||| || | |||||| ||| || | | |||||| || Sbjct 4397378 TTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTTATC 4397437 Query 48634 CATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693 | ||| || ||| | | | || ||||| | | |||| ||| | || || || Sbjct 4397438 CTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGTAATAGT 4397497 Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| || ||||| ||||| ||||||||||||||| Sbjct 4397498 TTTTCCAGTGAGGGTTTTTACAAAAATCTGCATC 4397531 Score = 82.4 bits (90), Expect = 6e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559 ||||| || | | ||| |||||||| || || |||||||| ||||| || || || Sbjct 4402273 CCTCCTCGAAGTCGTAAAACTAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC- 4402331 Query 48560 AATTGTCG-CTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618 || |||| | | ||||| |||||||| || | |||| || | |||||| || || Sbjct 4402332 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGG 4402391 Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678 | | ||||||||| ||||||| || | | | ||||| || | ||| Sbjct 4402392 AATCCCCTCCTTGTCCTGAATTTTCGCTTTCACATTGTCAATGGTGTCCGAGCTCTCGAC 4402451 Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727 ||| | || |||||||||||||| | || ||||| || ||||||||| Sbjct 4402452 CTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCATC 4402500 >seq13 Length=56485995 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTC-GCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 || || || ||||| |||||||| || ||| | |||| || ||||| || || || | Sbjct 54270738 TCTTTCTGGATGTTATAATCAGC-AAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAA 54270680 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 ||| | ||||||||| || || | | ||||||||| || || ||||| | Sbjct 54270679 AATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 54270620 Query 48653 GACGCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTT 48711 | || ||||| |||| || | || | |||| ||||||||| || ||||| || ||||| Sbjct 54270619 GTCG--ATGGTGTCGG-AGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTT 54270563 Query 48712 CACAAAAATCTGCATC 48727 |||||| ||||||||| Sbjct 54270562 CACAAAGATCTGCATC 54270547 >seq18 Length=57801308 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG-TCCTCCAGCTGCTTACCGCCGTA 48594 ||||| ||||| |||||||||||||| ||| || || |||| ||| || || || | Sbjct 49489105 TCCTTCTGAATATTGTAATCAGCCAAA-GTCCTTCCATCTTCCAACTGTTTCCCAGCGAA 49489047 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 ||| || | |||||||| || | | ||| |||||| ||| ||| ||| | | Sbjct 49489046 AATCAACCTTTGCTGATCTGGTGGAATCCCTTCTTTGTCCTGAATCTTCGCCTTAACATT 49488987 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | || ||||||| | |||| ||| | ||||||||||| || || | || || || Sbjct 49488986 GTCGATCGTATCGGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGTCAACGTCTTGAC 49488927 Query 48715 AAAAATCTGCATC 48727 |||||||||||| Sbjct 49488926 GAAAATCTGCATC 49488914 >seq14 Length=44799946 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 48536 TCCTTTTGAATGTTGTAATCAGCCAATTGTC-GCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 || || || ||||| ||||| || || ||| | |||| || ||||| || || || | Sbjct 8848396 TCTTTCTGGATGTTATAATCGGC-AAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAA 8848454 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 ||| | ||||||||| || || | | ||||||||| || || ||||| | Sbjct 8848455 AATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTT 8848514 Query 48653 GACGCTATGGTATCGGTAGACTCCGTC-TCGACTGTTATGGTTTTACCGGTGAGAGTTTT 48711 | || ||||| |||| || | || | |||| ||||||||| || ||||| || ||||| Sbjct 8848515 GTCG--ATGGTGTCGG-AGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTT 8848571 Query 48712 CACAAAAATCTGCATC 48727 |||||| ||||||||| Sbjct 8848572 CACAAAGATCTGCATC 8848587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421204234177148