Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1 172 9e-39 seq287 149 1e-31 seq12 147 3e-31 seq7 143 4e-30 seq149 140 5e-29 seq95 140 5e-29 seq10 138 2e-28 seq19 122 1e-23 >seq1 Length=92291805 Score = 172 bits (190), Expect = 9e-39 Identities = 182/240 (76%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 ||||||||||||||||| || ||||| || ||||||||| ||||||||||||| ||||| Sbjct 36790570 GATAACATCCAAGGAATTACTAAGCCGGCCATCCGTCGTTTGGCTCGTCGTGGAGGAGTT 36790511 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||| | || ||| ||| |||||||||| | | | || |||||||| ||| | || Sbjct 36790510 AAGAGAATCAGTGGCTTGATCTATGAAGAAACCAGAGGAGTATTGAAGATTTTCTTGGAG 36790451 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | ||||| | || || |||||||| | | | ||||| || || || Sbjct 36790450 AACGTCATTCGCGATGCAGTGACTTACACTGAGCACGCCAGAAGGAAGACCGTGACGGCC 36790391 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| |||||||| |||||||||| | ||||| |||||| ||||| Sbjct 36790390 ATGGATGTTGTTTATGCTTTGAAACGGCAAGGCCGTACTCTCTATGGATTTGGAGGTTAA 36790331 Score = 138 bits (152), Expect = 2e-28 Identities = 167/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| | || || || ||||||||||| |||||||| || || || || Sbjct 36701644 GCAAAGCGCCACCGCAAGGTC-CTCCGTGATAACATCCAGGGAATCACGAAACCGGCGAT 36701702 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||| | || || || |||||| || ||| ||| |||| || || | Sbjct 36701703 CCGGCGTCTAGCTCGTAGGGGAGGTGTTAAGCGTATCAGTGGCTTGATCTACGAGGAAAC 36701762 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| || |||||||||||| | ||| ||| |||| || || | ||| || || Sbjct 36701763 CCGTGGAGTGTTGAAGATCTTCTTGGAGAACGTGATCCGCGACGCCGTGACCTACACTGA 36701822 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGC 16656 |||||| | | ||||| || ||| |||||||| |||| ||||| Sbjct 36701823 GCACGCCAGGAGAAAGACGGTGACCGCCATGGATGTCGTTTATGC 36701867 >seq287 Length=295711 Score = 149 bits (164), Expect = 1e-31 Identities = 178/242 (74%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| |||||||| || || || ||||| || || || ||| |||||||||| || || | Sbjct 35441 GAGACAACATCCAGGGCATTACTAAGCCTGCCATTCGCCGTTTGGCTCGTCGAGGAGGTG 35500 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 ||||| | || ||| ||| |||||||||| | | | | || |||||||| ||| | Sbjct 35501 TCAAGAGGATCAGTGGCTTGATCTATGAAGAAACTAGGGGAGTATTGAAGATTTTCTTGG 35560 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || || | ||||||| | |||||||||||||| | | ||||| || ||| Sbjct 35561 AGAATGTGATTCGTGATGCTGTGACTTATACCGAGCACGCCAGGAGGAAGACCGTTACCG 35620 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 |||||||| | || ||||| |||||| | || ||| | | | ||||||||||| ||| Sbjct 35621 CCATGGATGTTGTTTATGCCTTGAAAAGGCAGGGCAGGACTCTCTATGGTTTTGGTGGTT 35680 Query 16698 AA 16699 || Sbjct 35681 AA 35682 >seq12 Length=102570143 Score = 147 bits (162), Expect = 3e-31 Identities = 195/268 (73%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | | || || || ||||| ||||| ||||| || ||||| ||||| Sbjct 5388644 GCGAAGCGTCACCGTAAGGTC-CTCCGTGATAATATCCAGGGAATTACGAAGCCGGCTAT 5388586 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||| |||||||| | || || ||||||||| || || ||| |||| ||||| | Sbjct 5388585 TCGGCGTTTGGCTCGTAGGGGAGGCGTCAAGCGTATCAGCGGCTTGATCTACGAAGAAAC 5388526 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | ||||||||||| ||| ||| || | ||| ||| || ||| || || Sbjct 5388525 CCGTGGTGTTCTTAAGATCTTCCTGGAGAACGTGATTCGTGACGCTGTCACCTACACAGA 5388466 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| | | |||||||| || | |||||| | || |||||| | || | || || Sbjct 5388465 GCACGCGAGGAGAAAGACTGTGACTGCTATGGATGTGGTTTATGCACTCAAGAGGCAGGG 5388406 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | | ||||| || || ||||| Sbjct 5388405 CAGGACTTTGTATGGATTCGGTGGTTAA 5388378 Score = 136 bits (150), Expect = 6e-28 Identities = 174/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || ||||| || || || |||||||| || || || ||| |||||||| | || || || Sbjct 4906748 GACAACATTCAGGGCATTACCAAGCCTGCGATTCGCCGTTTGGCTCGTAGGGGAGGTGTG 4906689 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 ||| | | || ||| |||| ||||| | || | || |||||||||||| | || Sbjct 4906688 AAGAGAATTAGCGGTTTGATCTACGAAGAAACCCGAGGCGTATTGAAGATCTTCTTGGAG 4906629 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | |||||| | || || |||||||| | | | |||||||| ||| || Sbjct 4906628 AACGTGATTCGTGATGCAGTGACATACACTGAGCACGCCAGAAGGAAGACTGTTACCGCC 4906569 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| |||||| | |||||| | | | |||||||||||| ||||| Sbjct 4906568 ATGGATGTTGTTTATGCCTTGAAAAGGCAAGGCAGGACTCTCTATGGTTTTGGAGGTTAA 4906509 >seq7 Length=42802127 Score = 143 bits (158), Expect = 4e-30 Identities = 194/268 (72%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | | || || || ||||| ||||| ||||| || ||||| ||||| Sbjct 21381225 GCAAAGCGTCACCGTAAGGTC-CTCCGTGATAATATCCAGGGAATTACAAAGCCGGCTAT 21381167 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||| |||||||| | || || |||||||| || || ||| |||| ||||| | Sbjct 21381166 TCGGCGTTTGGCTCGTAGGGGAGGCGTCAAGCGCATCAGCGGCTTGATCTACGAAGAAAC 21381107 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 |||| |||| | ||||||||| | ||| ||| || | ||| ||| || ||||||||| Sbjct 21381106 CCGTGGTGTTCTCAAGATCTTCTTGGAGAACGTGATTCGTGACGCTGTCACCTATACCGA 21381047 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| | | |||||||| || | |||||| | || ||||| | || | || || Sbjct 21381046 GCACGCGAGGAGAAAGACTGTGACTGCTATGGATGTGGTTTATGCGCTCAAGAGGCAGGG 21380987 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | | ||||| || || ||||| Sbjct 21380986 CAGGACTTTGTATGGATTCGGTGGTTAA 21380959 Score = 141 bits (156), Expect = 1e-29 Identities = 182/251 (73%), Gaps = 0/251 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| ||||||||||| || || ||||||||||| || || || | | |||||| | || Sbjct 24826712 TCTCCGAGATAACATTCAGGGCATCACCAAGCCGGCGATTCGGAGATTAGCTCGTAGAGG 24826771 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 || || ||| | | ||| ||| |||| || || | ||||| |||| | |||||||| Sbjct 24826772 CGGCGTGAAGAGGATTAGTGGCTTGATCTACGAGGAAACTCGTGGTGTTCTCAAGATCTT 24826831 Query 16573 CCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGT 16632 ||| | | |||||| | |||||| | |||||| |||||||||| ||||||||||| Sbjct 24826832 CCTTGAAAACGTTATACGTGATGCCGTAACCTATACGGAGCACGCTAGGCGTAAGACTGT 24826891 Query 16633 CACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 ||| | |||||| |||| ||||| | || | ||||| | | |||| ||||| || Sbjct 24826892 TACCGCTATGGATGTCGTTTATGCTCTCAAGAGACAAGGAAGGACTCTTTACGGTTTCGG 24826951 Query 16693 AAGTTAATCTT 16703 ||| || || Sbjct 24826952 TGGTTGATTTT 24826962 Score = 134 bits (148), Expect = 2e-27 Identities = 176/244 (72%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || ||||| || || || |||||||| || || || |||||||||||| | || || || Sbjct 20919607 GACAACATTCAGGGCATTACCAAGCCTGCGATTCGCCGTCTGGCTCGTAGGGGAGGTGTG 20919666 Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579 || | || || ||| |||| ||||| | || | || |||||||||||| | || Sbjct 20919667 AAAAGAATCAGCGGTTTGATCTACGAAGAAACCCGAGGCGTATTGAAGATCTTCTTGGAG 20919726 Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639 | ||| || | |||||| | || || || ||||| | | | ||||| || ||| || Sbjct 20919727 AACGTGATTCGTGATGCCGTGACATACACTGAACACGCCAGAAGGAAGACCGTTACCGCC 20919786 Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||||| | || ||||| |||||| | |||||| | | | |||||||||||| ||||| Sbjct 20919787 ATGGATGTTGTTTATGCCTTGAAAAGGCAAGGCAGGACTCTCTATGGTTTTGGAGGTTAA 20919846 Query 16700 TCTT 16703 ||| Sbjct 20919847 GCTT 20919850 >seq149 Length=580738 Score = 140 bits (154), Expect = 5e-29 Identities = 194/272 (71%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||| | ||||| | ||| ||||||||||| || || ||||||||||| || || Sbjct 346862 CGCTAAGAGGCATCGTAAGGTTCTCCGAGATAACATTCAGGGCATCACCAAGCCGGCGAT 346803 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || | | |||||| | || || || ||| | | ||| ||| |||| || || | Sbjct 346802 TCGGAGATTAGCTCGTAGAGGCGGCGTGAAGAGGATTAGTGGTTTGATCTACGAGGAAAC 346743 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| | ||||||||||| | | |||||| | ||||| || |||||| || Sbjct 346742 TCGTGGGGTTCTCAAGATCTTCCTTGAAAACGTTATACGCGATGCCGTCACCTATACGGA 346683 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||||| ||||||||||| ||| | || ||| |||| ||||| | || | ||||| Sbjct 346682 GCACGCTAGGCGTAAGACTGTTACCGCTATCGATGTCGTTTATGCTCTCAAGAGACAAGG 346623 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 | | |||| ||||| || ||| || || Sbjct 346622 AAGGACTCTTTACGGTTTCGGCGGTTGATTTT 346591 >seq95 Length=801799 Score = 140 bits (154), Expect = 5e-29 Identities = 176/242 (73%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||| ||||| || || || || ||||| || || || ||| |||||||||| || || | Sbjct 277397 GAGACAACATTCAGGGCATTACTAAGCCTGCCATTCGCCGTTTGGCTCGTCGAGGAGGTG 277338 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 ||||| | || ||| ||| |||||||||| | | | || |||||||| ||| | Sbjct 277337 TCAAGAGGATCAGTGGCTTGATCTATGAAGAAACCAGGGGAGTATTGAAGATTTTCTTGG 277278 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 ||| || || | ||||||| | |||||||||||||| | | ||||| || ||| Sbjct 277277 AGAATGTGATTCGTGATGCTGTGACTTATACCGAGCACGCCAGGAGGAAGACCGTTACCG 277218 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697 | |||||| | || ||||| |||||| | || ||| | | | |||||||||||| ||| Sbjct 277217 CTATGGATGTTGTTTATGCCTTGAAAAGGCAGGGCAGGACTCTCTATGGTTTTGGAGGTT 277158 Query 16698 AA 16699 || Sbjct 277157 AA 277156 >seq10 Length=91128445 Score = 138 bits (152), Expect = 2e-28 Identities = 193/271 (71%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 |||||| | ||||| | | ||| ||||||||||| ||||| ||||| ||||| || || Sbjct 41309252 GCTAAGAGGCATCGGAAAGTTCTCCGAGATAACATTCAAGGCATCACTAAGCCGGCGATT 41309193 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 ||| | | |||||| | || || || ||| | || ||| || |||| || || | | Sbjct 41309192 CGTAGGTTAGCTCGTAGAGGCGGTGTGAAGAGGATCAGTGGCCTGATCTACGAGGAAACT 41309133 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||| | |||||||| || | | |||||| | |||||| | |||||| || Sbjct 41309132 CGTGGAGTTCTCAAGATCTTTCTGGAAAACGTTATACGCGATGCTGTTACCTATACGGAA 41309073 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||||| ||||| ||||| ||| | |||||| | || ||||| | || | ||||| Sbjct 41309072 CACGCTAGGCGTAAAACTGTTACCGCTATGGATGTTGTTTATGCTCTCAAGAGACAAGGA 41309013 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 | | |||||||||| || ||| || || Sbjct 41309012 AGGACTCTTTATGGTTTCGGTGGTTGATTTT 41308982 Score = 129 bits (142), Expect = 9e-26 Identities = 188/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||| | ||| || ||||| ||||| || ||||| ||||| || || Sbjct 53019524 GCAAAGCGCCATCGTAAGGTTCTCCGTGATAATATCCAGGGTATCACAAAGCCGGCAATT 53019583 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||||||| | || || ||||||||| || || | |||| || || | Sbjct 53019584 CGGCGTTTGGCTCGTAGAGGAGGCGTCAAGCGTATCAGCGGTCTAATCTACGAGGAAACC 53019643 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||||||||||||||| | ||| ||| || | |||||| | ||| ||||| Sbjct 53019644 CGTGGGGTTTTGAAGATCTTCTTGGAGAACGTGATTCGTGATGCAGTAACCTACACCGAA 53019703 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || | | |||||||| || | |||||| | || |||||| |||| | || ||| Sbjct 53019704 CATGCGAGGAGGAAGACTGTGACTGCTATGGATGTGGTTTATGCACTGAAGAGGCAGGGC 53019763 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTA 16698 | | | ||||| ||||| |||| Sbjct 53019764 AGGACATTGTATGGGTTTGGTGGTTA 53019789 >seq19 Length=70911690 Score = 122 bits (134), Expect = 1e-23 Identities = 187/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||| | ||| || ||||| ||||| || ||||| || || || || Sbjct 58841738 GCAAAGCGCCATCGTAAGGTTCTCCGTGATAATATCCAGGGTATCACAAAACCGGCAATT 58841679 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||| |||||||| | || || ||||| ||| || || || |||| || || | Sbjct 58841678 CGGCGTTTGGCTCGTAGAGGAGGCGTCAAACGTATCAGCGGTTTAATCTACGAGGAAACC 58841619 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| ||||||||||||||| | ||| ||| || | |||||| | ||| |||| Sbjct 58841618 CGTGGGGTTTTGAAGATCTTCTTGGAGAACGTGATTCGTGATGCAGTGACCTACGCCGAA 58841559 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 || || | | |||||||| || | |||||| | || |||||| |||| | || ||| Sbjct 58841558 CATGCGAGGAGGAAGACTGTGACTGCTATGGATGTGGTTTATGCACTGAAGAGGCAGGGC 58841499 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAA 16699 | | | ||||| ||||| ||||| Sbjct 58841498 AGGACTTTGTATGGGTTTGGTGGTTAA 58841472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79066835919564