Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq22 199 4e-46 seq19 174 2e-38 seq228 125 8e-24 seq16 107 2e-18 seq17 91.5 2e-13 seq6 91.5 2e-13 seq2 91.5 2e-13 seq985 89.7 6e-13 seq222 89.7 6e-13 seq52 89.7 6e-13 seq18 89.7 6e-13 seq172 87.8 2e-12 seq11 87.8 2e-12 seq23 86.0 7e-12 seq12 86.0 7e-12 seq5 86.0 7e-12 seq4 86.0 7e-12 seq57 84.2 2e-11 seq9 84.2 2e-11 seq312 82.4 8e-11 >seq22 Length=61129363 Score = 199 bits (220), Expect = 4e-46 Identities = 400/591 (68%), Gaps = 9/591 (2%) Strand=Plus/Plus Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 ||||| ||||| || || ||| || | |||||| |||||||| || ||||| || Sbjct 6287569 GTACAGCAAGCAAGCGAAATCGCAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGA 6287628 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||| ||||| || || | | || | || || | ||||||||| | | ||||| || Sbjct 6287629 GAAAGTTAATCCGGGCATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCC 6287688 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 || ||||| || ||||| ||| ||||| || | | |||||||| ||| || | Sbjct 6287689 GGAGAAAAAGATCCCTTCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCC 6287748 Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321 | | ||||||||| | |||||| ||||||||||| | ||| || | || || Sbjct 6287749 G---CCGTCGATCCATTTCATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTC 6287805 Query 93322 GATAGCGTTAAATAG---GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378 ||| ||| || || || | | || || |||||| |||||| || |||| | Sbjct 6287806 GATGGCGCGGAAAAGACGGTTCTTT---TCATCGGAATCTTTTATGTAAGTCTCGAGAAG 6287862 Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCT 93438 ||| ||||| || || |||| ||| || || || |||||||| || || ||| | Sbjct 6287863 GAGACTGTACATCTCGGAGTGGATATTTTCGATAGCGATTTGGAAACCATAAAAAGCACG 6287922 Query 93439 AGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACC 93498 || || | |||||| || |||| || | | | || || ||| |||||| || Sbjct 6287923 CGCCTCGGAGATCTGGACCTCTTTCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCC 6287982 Query 93499 ATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAG 93558 |||||| || || ||||| || | | || | || || || | |||||| | | || Sbjct 6287983 ATCGGAGGCGGCGAAAAAGGCGAGAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAG 6288042 Query 93559 CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGC 93618 | ||||| | |||||| || ||||||||||| || | ||||||||||| || Sbjct 6288043 AGTTTCCCAGTGACGAAGATCTGAAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGC 6288102 Query 93619 TTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669 ||| ||||| |||||||| ||||||| ||| | ||||| || ||||| || Sbjct 6288103 TTCGGCTTTCTTGTACATTTCCCATACTTCTGGGTATTGGATCGGAAACAT 6288153 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/92 (82%), Gaps = 2/92 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||||| | | ||||| Sbjct 49953548 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGCG 49953607 Query 126324 TGGGTTCGAACCCCACACCTGACAAATTATTA 126355 ||||||| || ||||| |||||| ||| || Sbjct 49953608 TGGGTTCAAATCCCACTTCTGACATTTTACTA 49953639 >seq19 Length=70911690 Score = 174 bits (192), Expect = 2e-38 Identities = 303/440 (69%), Gaps = 7/440 (2%) Strand=Plus/Minus Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 ||||| ||||| ||||||||| ||| | |||||| ||||| || |||||||| || Sbjct 44463887 GTACAGCAAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGA 44463828 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||| ||||| || || | | || || || || | ||||||||| | | ||||| || Sbjct 44463827 GAAAGTTAATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCACAGAAACTGCC 44463768 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA--TTTGCG 93259 || |||||||| ||||| ||| || || || | | |||||||||||| || || Sbjct 44463767 GGAGAAAAATATGCCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGCC 44463708 Query 93260 GAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT 93319 | | | ||||||||| |||||||||||||||||||| | || || | ||| Sbjct 44463707 G-----CCGTCGATCCATTTCAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTT 44463653 Query 93320 TCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAAC 93379 || |||||| || ||| | | ||| |||||| || || || |||| | Sbjct 44463652 TCAGTAGCGTGGAAGAGGCGGTTTTTTTCGGTGGAATCTTTAATATAAGTTTCGAGGAGG 44463593 Query 93380 AGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTA 93439 ||| |||||| ||||| |||| |||||| || || ||||||||||| || || | Sbjct 44463592 AGACTATACATCTCAGAGTGGATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGC 44463533 Query 93440 GCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCA 93499 || |||| ||| || || |||| || | | |||||||||| || || ||| Sbjct 44463532 GCCTCCGCGATTTGGACCTCTTTCATGAAGCGAACAGCGAGATTTTCTAGAACGATGCCA 44463473 Query 93500 TCGGATGCTGCaaaaaaaGC 93519 |||||||| || || || || Sbjct 44463472 TCGGATGCGGCGAAGAAGGC 44463453 >seq228 Length=356584 Score = 125 bits (138), Expect = 8e-24 Identities = 159/215 (74%), Gaps = 9/215 (4%) Strand=Plus/Plus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 ||||| ||||||||| ||| | |||||| ||||| || |||||||| || ||| ||| Sbjct 282327 AAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTT 282386 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTACCAGaaaa 93207 || || || | | || || || || | ||||||||| | ||| ||||| || || || Sbjct 282387 AATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGC-GCAGAAACTGCCGGAGAA 282445 Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA--TTTGCGGAATTA 93265 |||||| ||||| ||| || || || | | |||||||||||| || |||| Sbjct 282446 AAATATGCCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGCGG----- 282500 Query 93266 CTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTT 93300 | | ||||||||| |||||||||||||||||||| Sbjct 282501 CCGTCGATCCATTTGAAAGCCCAATCGGCTTTTTT 282535 Score = 107 bits (118), Expect = 2e-18 Identities = 214/316 (68%), Gaps = 6/316 (2%) Strand=Plus/Plus Query 93394 AGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTG 93453 ||| |||| |||||| || || ||||||||||| || || | || || | ||| || Sbjct 283343 AGAGTGGATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGCGCCTCTGCGATTTG 283402 Query 93454 CACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaa 93513 || |||| || | |||||||||| ||| || ||||||||||| || || Sbjct 283403 GACCTCTTTCATGAAGAGAACGGCGAGATTTTCGAGGACGATGCCATCGGATGCGGCGAA 283462 Query 93514 aaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGA 93573 || || | | ||| | || || || || || | |||| || | ||| | | Sbjct 283463 GAAGGCAAGAACATGACTGATGAAGTGGCGTTCGTCGGCGGTAAGATTTTGCCAGTGTGG 283522 Query 93574 TAGATCTTTTGAA---AGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTT 93630 ||||| ||| ||||| ||||| ||| |||||||||| || ||||| ||||| || Sbjct 283523 AAGATC---GGAATCGAGATCAACTTCCTCGGCAGTCCAAAAAGAGGCTTCGGCTTTCTT 283579 Query 93631 GTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATC 93690 |||||| |||||||| | | | ||||| ||||| || ||| || || | ||||| Sbjct 283580 GTACATTTCCCATATCTGTGGGTATTGGATTGGGAACATGCAGAAGCGGTCCGGGTTGGA 283639 Query 93691 TTTTAGTAACGGCTCT 93706 ||| ||||||||| Sbjct 283640 GGCTAGCAACGGCTCT 283655 >seq16 Length=102030775 Score = 107 bits (118), Expect = 2e-18 Identities = 239/355 (67%), Gaps = 9/355 (3%) Strand=Plus/Minus Query 93082 GTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCT 93141 ||||| ||||| || || || || | |||||| |||||||| || ||||| || Sbjct 57862385 GTACAGCAAGCAAGCGAAATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGA 57862326 Query 93142 GAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACC 93201 ||| ||||| || || | | || | || || | ||||||||| | | ||||| || Sbjct 57862325 GAAAGTTAATCCGGGCATTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCC 57862266 Query 93202 AGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGA 93261 || ||||| || || || ||| ||||| || | | |||||||| ||| || | Sbjct 57862265 GGAGAAAAAGATCCCCTCTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCC 57862206 Query 93262 ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTC 93321 | | ||||||||| | |||||| ||||||||||| | ||| || | || || Sbjct 57862205 G---CCGTCGATCCATTTCATAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTC 57862149 Query 93322 GATAGCGTTAAATA---GGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAA 93378 ||| ||| || | ||| ||| || || |||||| |||||| || |||| | Sbjct 57862148 GATGGCGCGGAAAAGACGGT--TCT-TTTCATCGGAATCTTTTATGTAAGTCTCGAGAAG 57862092 Query 93379 CAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433 ||| ||||| || || |||| ||| || || || |||||||| || || ||| Sbjct 57862091 GAGACTGTACATCTCGGAGTGGATATTTTCGATAGCGATTTGGAAACCATAAAAA 57862037 >seq17 Length=39386523 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/84 (85%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||||| | | | ||||| Sbjct 1805403 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTTAGAGAGCG 1805462 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 1805463 TGGGTTCAAATCCCACTTCTGACA 1805486 >seq6 Length=79162310 Score = 91.5 bits (100), Expect = 2e-13 Identities = 71/84 (85%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||||| | | | ||||| Sbjct 76491519 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTTAGAGAGCG 76491460 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 76491459 TGGGTTCAAATCCCACTGCTGACA 76491436 >seq2 Length=106994729 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/97 (81%), Gaps = 6/97 (6%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320 |||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 6585222 CAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAG 6585279 Query 126321 -GCGTGGGTTCGAACCCCACACCTGACAAATTATTAT 126356 |||||||||| || ||||| |||||| |||| || Sbjct 6585280 GGCGTGGGTTCAAATCCCACTTCTGACATTTTATAAT 6585316 Score = 91.5 bits (100), Expect = 2e-13 Identities = 75/90 (83%), Gaps = 6/90 (7%) Strand=Plus/Plus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA- 126320 |||||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 6585664 TACAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAG 6585721 Query 126321 ---GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 6585722 AGGGCGTGGGTTCAAATCCCACTTCTGACA 6585751 >seq985 Length=65018 Score = 89.7 bits (98), Expect = 6e-13 Identities = 84/106 (79%), Gaps = 6/106 (6%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 44863 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 44806 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 |||||||||| || ||||| |||||| || | || ||||||| Sbjct 44805 GCGTGGGTTCAAATCCCACTTCTGACATTTTTGTTTTCTAATTTTT 44760 >seq222 Length=367058 Score = 89.7 bits (98), Expect = 6e-13 Identities = 77/94 (82%), Gaps = 6/94 (6%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 132897 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 132954 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||||||| || ||||| |||||| ||||| Sbjct 132955 GCGTGGGTTCAAATCCCACTTCTGACATTTTATT 132988 >seq52 Length=1384192 Score = 89.7 bits (98), Expect = 6e-13 Identities = 77/94 (82%), Gaps = 6/94 (6%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 188922 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 188865 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATT 126354 |||||||||| || ||||| |||||| ||||| Sbjct 188864 GCGTGGGTTCAAATCCCACTTCTGACATTTTATT 188831 >seq18 Length=57801308 Score = 89.7 bits (98), Expect = 6e-13 Identities = 83/103 (81%), Gaps = 7/103 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 28678020 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 28678077 Query 126322 CGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTT 126364 ||||||||| || ||||| ||||| |||| | ||| || ||| Sbjct 28678078 CGTGGGTTCAAATCCCACTTCTGAC-AATTTTAATTTGATTTT 28678119 Score = 86.0 bits (94), Expect = 7e-12 Identities = 72/87 (83%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 11796025 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 11796082 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 11796083 GCGTGGGTTCAAATCCCACTTCTGACA 11796109 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 1039680 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 1039737 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 1039738 CGTGGGTTCAAATCCCACTTCTGACA 1039763 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/84 (82%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 49543163 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 49543220 Query 126328 TTCGAACCCCACACCTGACAAATT 126351 ||| || |||||| ||| ||| || Sbjct 49543221 TTCAAATCCCACAGCTGTCAATTT 49543244 >seq172 Length=512876 Score = 87.8 bits (96), Expect = 2e-12 Identities = 73/88 (83%), Gaps = 6/88 (7%) Strand=Plus/Plus Query 126264 CAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--- 126320 |||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 392572 CAGTCAGGGTGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAG 392629 Query 126321 -GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 392630 GGCGTGGGTTCAAATCCCACTTCTGACA 392657 Score = 82.4 bits (90), Expect = 8e-11 Identities = 73/90 (81%), Gaps = 6/90 (7%) Strand=Plus/Plus Query 126262 TACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA- 126320 |||||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 395583 TACAGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAG 395640 Query 126321 ---GCGTGGGTTCGAACCCCACACCTGACA 126347 |||| |||| || ||||| |||||| Sbjct 395641 AGGGCGTATGTTCAAATCCCACTTCTGACA 395670 >seq11 Length=95484752 Score = 87.8 bits (96), Expect = 2e-12 Identities = 76/93 (82%), Gaps = 6/93 (6%) Strand=Plus/Minus Query 126263 ACAGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA-- 126320 ||||||||| ||||||||||||||||| |||||| | ||| |||||| ||||| || Sbjct 82484163 ACAGTCAGGATGGCCGAGTGGTCTAAGACGCCAGGCTCAAGTTCTGGT--CCTCGTGAGA 82484106 Query 126321 --GCGTGGGTTCGAACCCCACACCTGACAAATT 126351 |||||||||| || ||||| |||||||||| Sbjct 82484105 GGGCGTGGGTTCAAATCCCACTTCTGACAAATT 82484073 >seq23 Length=61753794 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGCG 126323 |||||| ||||||||||||||||||||||||| | ||| |||||||| | | ||||| Sbjct 6613990 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGTTCTCGTGAGAGAGCG 6613931 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 ||||||| || ||||| |||||| Sbjct 6613930 TGGGTTCAAATCCCACTTCTGACA 6613907 >seq12 Length=102570143 Score = 86.0 bits (94), Expect = 7e-12 Identities = 77/96 (80%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 6361238 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 6361295 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATT 126363 ||| || |||||| ||| || || ||||| |||| Sbjct 6361296 TTCAAATCCCACAGCTGTCATGTTTTTATTTAAATT 6361331 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 90462058 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 90462115 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| | ||||| |||||| Sbjct 90462116 GCGTGGGTTCAAGTCCCACTTCTGACA 90462142 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || Sbjct 90465651 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 90465708 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| | ||||| |||||| Sbjct 90465709 GCGTGGGTTCAAGTCCCACTTCTGACA 90465735 >seq5 Length=56898656 Score = 86.0 bits (94), Expect = 7e-12 Identities = 73/89 (82%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 54145971 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 54146028 Query 126328 TTCGAACCCCACACCTGACAAATTATTAT 126356 ||| || |||||| ||| || ||||||| Sbjct 54146029 TTCAAATCCCACAGCTGTCACTTTATTAT 54146057 >seq4 Length=78750349 Score = 86.0 bits (94), Expect = 7e-12 Identities = 84/106 (79%), Gaps = 7/106 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| |||| |||||||||||||||||||| | ||| |||||| ||||| || Sbjct 3233305 AGTCAGGATGGCTGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGG 3233362 Query 126321 GCGTGGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTT 126366 |||||||||| || ||||| |||||| || || || ||||||| Sbjct 3233363 GCGTGGGTTCAAATCCCACTTCTGACATTTTGTT-TTCTAATTTTT 3233407 >seq57 Length=1330717 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/103 (80%), Gaps = 6/103 (6%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| |||||||||||||||||||||||||||||| | |||||| || | ||||||| Sbjct 426605 CAGTTTGGCCGAGTGGTCTAAGGCGCCAGATTTAGGCTCTGGT--CCGAAAGGGCGTGGG 426548 Query 126328 TTCGAACCCCACACCTGACAAATT--ATTATTGGAATTTTTGT 126368 ||| || |||||| ||| || || |||||| |||||| || Sbjct 426547 TTCAAATCCCACAGCTGTCAGTTTTAATTATT--AATTTTAGT 426507 >seq9 Length=117247901 Score = 84.2 bits (92), Expect = 2e-11 Identities = 71/86 (83%), Gaps = 6/86 (7%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA----G 126321 |||||| ||||||||||||||||||||||||| | ||| |||||| ||||| || | Sbjct 43125160 GTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CCTCGTGAGAGGG 43125217 Query 126322 CGTGGGTTCGAACCCCACACCTGACA 126347 ||||||||| || ||||| |||||| Sbjct 43125218 CGTGGGTTCAAATCCCACTTCTGACA 43125243 >seq312 Length=263153 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 6/87 (7%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA---- 126320 ||||||| ||||||||||||||||||||||||| | ||| |||||| | ||| || Sbjct 132576 AGTCAGGATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGGT--CTTCGTGAGAAG 132633 Query 126321 GCGTGGGTTCGAACCCCACACCTGACA 126347 |||||||||| || ||||| |||||| Sbjct 132634 GCGTGGGTTCAAATCCCACTTCTGACA 132660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556797122967520