Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_012663.1 Length=60074 Score E Sequences producing significant alignments: (Bits) Value seq1629 82.4 3e-11 >seq1629 Length=27321 Score = 82.4 bits (90), Expect = 3e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 59729 ATGCCGACTACAGGACTTGAACCTGTGACCTTCTGATTACAAATCAGACGCTCTACCAAC 59788 ||||||| ||||||| ||||||| ||| |||||||||||||||| ||||||||| Sbjct 4706 ATGCCGATATCAGGACTCGAACCTGATACCACCTGATTACAAATCAGATACTCTACCAAA 4647 Query 59789 TGAGCTAAATCGGCT 59803 ||||||| ||||||| Sbjct 4646 TGAGCTATATCGGCT 4632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192094330045536