Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05]
9,148 sequences; 2,189,140,010 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq14 98.7 8e-16
seq168 95.1 1e-14
seq19 95.1 1e-14
seq18 95.1 1e-14
seq17 95.1 1e-14
seq13 95.1 1e-14
seq24 93.3 3e-14
seq23 93.3 3e-14
seq25 89.7 4e-13
seq11 89.7 4e-13
seq1 87.8 1e-12
seq15 84.2 2e-11
>seq14
Length=44799946
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| ||||||||||| ||||||||||| ||||| ||| ||||| ||| | |
Sbjct 8848358 ATGCAAATCTTTGTCAAAACCTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGTTCC 8848299
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || |||||| ||||| |||||| | || || |||
Sbjct 8848298 GACACCATCGACAACGTTAAGGCCAAGATTCAAGACAAGGAAGGCATCCCACCTGACCAA 8848239
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | | || | || || ||||| |||| |||| || || |||| ||||| ||
Sbjct 8848238 CAGCGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGGAGGACCTTGGCTGATTATAAT 8848179
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| ||||| ||||| || | ||| | || || || || || || ||
Sbjct 8848178 ATCCAAAAGGAATCCACCCTTCACCTTGTTTTGAGGCTTCGTGGAGG 8848132
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || |||||||| ||||| ||||||||||| || ||| | || || |
Sbjct 8848130 ATGCAGATTTTTGTCAAGACTTTGACCGGCAAAACAATCACCTTGGAGGTTGAAAGCTCC 8848071
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | | || || |||||| || || ||||| | || |||||
Sbjct 8848070 GATACCATTGACAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAG 8848011
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||| || || | ||| || ||||| |||| |||| || || |||| ||||| |||
Sbjct 8848010 CAAAGGCTCATCTTTGCCGGCAAACAATTGGAAGATGGGAGGACTTTGGCTGATTATAAC 8847951
Query 110453 ATTCAAAAAGAATCTAC 110469
||||| ||||| |||||
Sbjct 8847950 ATTCAGAAAGAGTCTAC 8847934
>seq168
Length=529997
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| ||||| ||||| || |||||||| | ||| ||||
Sbjct 131603 ATGCAGATCTTCGTCAAGACTTTGACCGGTAAGACCATTACTTTAGAAGTGGAGAGCTCG 131662
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || ||| ||||||| ||||||||||| | || | |||
Sbjct 131663 GATACGATTGATAACGTGAAAGCGAAGATTCAGGACAAAGAAGGAATTCCACCAGGTCAG 131722
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||| | |||| ||| || ||||||||||| |||| || || |||| |||||||
Sbjct 131723 CAAAGGTTGATTTTTGCTGGGAAACAGCTGGAAGATGGAAGGACTTTGGCTAATTACAAT 131782
Query 110453 ATTCAAAAAGAATCTAC 110469
|||||||| || || ||
Sbjct 131783 ATTCAAAAGGAGTCCAC 131799
>seq19
Length=70911690
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| ||||| || |||||| | || ||||| ||||| ||| |||| ||| |
Sbjct 3139090 ATGCAGATATTCGTGAAAACTCTTACTGGCAAGACCATCACCCTCGAGGTGGAAAGTTCT 3139031
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || || ||||| ||||| ||||| | || || |||
Sbjct 3139030 GATACAATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGACCAA 3138971
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| ||||||||||| || |||| | |||| | ||||||||||||
Sbjct 3138970 CAGAGGCTTATCTTTGCCGGTAAACAGCTTGAAGATGGCCGAACTCTTGCGGATTACAAC 3138911
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || ||||| |||||
Sbjct 3138910 ATCCAGAAAGAGTCTAC 3138894
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| |||||||| ||||| | || ||||| ||||| ||| |||| ||| |
Sbjct 3146612 ATGCAGATATTTGTGAAAACCCTTACTGGCAAGACCATCACCCTCGAGTTGGAAAGTTCT 3146553
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || || ||||| ||||| ||||| | || || |||
Sbjct 3146552 GATACGATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCTCCAGACCAA 3146493
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| ||||||||||| || |||| | |||| | ||||||||||||
Sbjct 3146492 CAGAGGCTTATCTTTGCAGGTAAACAGCTTGAAGATGGCCGAACTCTTGCGGATTACAAC 3146433
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || ||||| |||||
Sbjct 3146432 ATCCAGAAAGAGTCTAC 3146416
Score = 84.2 bits (92), Expect = 2e-11
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAA-CG-GAGCCTG 110330
||||| ||||| || || || || ||||| |||||||| ||| | || || |||| |
Sbjct 3137494 ATGCAGATATTCGTGAAGACCTTGACCGGTAAAACCATCACCCTGGAGGTCGAGAGCTCG 3137435
Query 110331 ACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATC 110390
|| || | | | | || ||| ||| ||| ||||| || || | || || |
Sbjct 3137434 --GACACCATTGACAATGTCAAAGCGAAAATTCAGGACAAGGAGGGGATTCCTCCAGACC 3137377
Query 110391 AACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACA 110450
| || || | |||| ||| || || ||||| ||||| | || ||| | || || || |
Sbjct 3137376 AGCAGAGGTTGATTTTTGCCGGGAAGCAGCTTGAGGAGGGGAGGACACTTGCAGACTATA 3137317
Query 110451 ACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|||| ||||||||||| || |||| |||| ||| |||| ||||| ||
Sbjct 3137316 ACATCCAAAAAGAATCGACCCTGCATTTGGTTTTACGACTTCGAGGAGG 3137268
>seq18
Length=57801308
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || || || || |||||||| || | || |||| | |
Sbjct 49488915 ATGCAGATTTTCGTCAAGACGTTGACTGGGAAAACCATAACTTTGGAGGTGGAGAGTTCC 49488974
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | || || ||||||| ||||||||||| | || |||||
Sbjct 49488975 GATACGATCGACAATGTTAAGGCGAAGATTCAGGACAAAGAAGGGATTCCACCAGATCAG 49489034
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||| | |||| || || |||||| |||| |||| || || |||| ||||||||
Sbjct 49489035 CAAAGGTTGATTTTCGCTGGGAAACAGTTGGAAGATGGAAGGACTTTGGCTGATTACAAT 49489094
Query 110453 ATTCAAAAAGAATCTAC 110469
||||| || ||||| ||
Sbjct 49489095 ATTCAGAAGGAATCCAC 49489111
>seq17
Length=39386523
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || |||||||| ||||||||||| ||||| ||| ||||| ||| |
Sbjct 31748339 ATGCAGATCTTCGTCAAAACCTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTCC 31748398
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || || ||| ||||| |||||| | || || ||
Sbjct 31748399 GACACCATCGACAATGTGAAGTCTAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAG 31748458
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | || || | || || |||||||| ||||| | | | || |||| |||||||||
Sbjct 31748459 CAGCGTCTCATCTTCGCCGGAAAACAGCTCGAGGACGGCCGTACCTTGGCCGATTACAAC 31748518
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| || || ||||| || | ||| | || ||| | || || |||||
Sbjct 31748519 ATCCAGAAGGAATCCACCCTCCACCTTGTCTTACGTCTTCGTGGGGG 31748565
Score = 86.0 bits (94), Expect = 5e-12
Identities = 161/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAA-ACG-GAGC-CT 110329
||||| || || |||||||||||||||||||| ||||| ||| ||||| || |||| ||
Sbjct 31748567 ATGCAGATCTTCGTCAAAACTTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTCT 31748626
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
||| || ||| | ||||| || ||| ||||| |||||| | || ||
Sbjct 31748627 GAC---ACCATCGATAATGTAAAGTCTAAAATTCAAGACAAGGAAGGCATCCCACCAGAC 31748683
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|| || | || || | || || |||||||| || |||| | | || |||| |||||
Sbjct 31748684 CAGCAGCGTCTCATCTTCGCCGGCAAACAGCTCGAAGATGGCCGTACCCTGGCCGATTAT 31748743
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|| || || || ||||| || | ||| | || | | || || |||||||
Sbjct 31748744 AATATCCAGAAGGAATCCACCCTCCACCTCGTCCTCCGTCTTCGCGGGGGAA 31748795
>seq13
Length=56485995
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| ||||||||||| ||||||||||| ||||| ||| ||||| ||| | |
Sbjct 54270776 ATGCAAATCTTTGTCAAAACCTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGTTCC 54270835
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || ||| | | || || |||||| ||||| ||||| | || || |||
Sbjct 54270836 GACACCATCGACAACGTTAAGGCCAAGATTCAAGACAAGGAAGGAATCCCACCTGACCAA 54270895
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| | | || | || || ||||| |||| |||| || || |||| ||||| ||
Sbjct 54270896 CAGCGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGGAGGACCTTGGCTGATTATAAT 54270955
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
|| ||||| ||||| || | ||| | || || || || || || ||
Sbjct 54270956 ATCCAAAAGGAATCCACCCTTCACCTTGTTTTGAGGCTTCGTGGAGG 54271002
>seq24
Length=55877068
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||| || | ||||| || ||||| || | || |||| |
Sbjct 24584080 ATGCAAATTTTTGTCAAGACCCTCACCGGAAAGACCATCACATTGGAGGTGGAGAGTTCT 24584139
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | | || || |||||| ||||| |||||| | ||| || ||
Sbjct 24584140 GATACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCCCCAGACCAG 24584199
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||| || || | || ||||| || || ||||||| | | ||| |||| |||||||||
Sbjct 24584200 CAAAGGCTGATCTTCGCTGGTAAGCAACTTGAGGATGGCCGCACATTGGCTGATTACAAC 24584259
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|| || || || || || | ||| ||||| | | || || || ||||
Sbjct 24584260 ATCCAGAAGGAGTCCACACTCCACTTGGTGCTTCGCCTACGTGGAGGAA 24584308
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | || ||||| ||||| ||| | || ||| |
Sbjct 24583852 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAAAGTTCT 24583911
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | ||||| ||||| ||||| ||||| | || || |||
Sbjct 24583912 GATACCATCGACAATGTAAAGACCAAGATCCAAGACAAGGAAGGGATCCCACCAGACCAA 24583971
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| ||||||||||||||||||| | | || | || || ||||||
Sbjct 24583972 CAGAGGCTTATCTTTGCTGGTAAACAGCTGGAGGATGGCCGTACCCTTGCTGACTACAAC 24584031
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || || ||||| ||
Sbjct 24584032 ATCCAGAAGGAATCCAC 24584048
>seq23
Length=61753794
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||| | ||||| || || | || || || || |||||| | ||| ||| |
Sbjct 11030816 ATGCAAGTTTTTGTGAAGACCCTCACAGGAAAGACTATTACCTTGGAAGTTGAGAGTTCT 11030875
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | | || ||| ||||| ||||| ||||| | || |||||||
Sbjct 11030876 GATACGATTGACAATGTGAAAGCTAAGATCCAGGACAAGGAAGGTATTCCACCGGATCAA 11030935
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || || |||| ||| || || ||||||||||||| || || | || ||||| ||
Sbjct 11030936 CAGAGGCTGATTTTTGCTGGCAAGCAGCTGGAGGATGGGAGGACCCTTGCTGATTATAAT 11030995
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
||||| ||||| || || | ||| ||||| | | ||||| || ||||
Sbjct 11030996 ATTCAGAAAGAGTCAACCCTCCACTTGGTGCTTCGCCTGCGTGGTGGAA 11031044
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||||||| | || || || || |||||| | || |||| |
Sbjct 39554211 ATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACAATTACCTTGGAGGTGGAGAGTTCG 39554152
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || ||| |||||| ||||||||||| | || || |||
Sbjct 39554151 GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAAGAAGGAATCCCACCAGACCAA 39554092
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||| | |||| ||| || ||||| || || |||| || || | || ||||| ||
Sbjct 39554091 CAAAGATTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGGACTCTTGCCGATTATAAT 39554032
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || || || |||||
Sbjct 39554031 ATCCAGAAGGAGTCTAC 39554015
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| ||||| ||||| | || ||||| ||||| ||| |||| |||| |
Sbjct 39554667 ATGCAAATCTTTGTTAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGTTCA 39554608
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | || || ||||| || || ||||| | || ||||||
Sbjct 39554607 GACACCATTGATAATGTGAAGGCTAAGATCCAAGATAAGGAAGGGATCCCACCGGATCAG 39554548
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| || ||||| || ||||||| | | || | || || ||||||
Sbjct 39554547 CAGAGGCTTATCTTTGCTGGCAAACAACTTGAGGATGGCCGCACGCTAGCCGACTACAAC 39554488
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| |||||||| || | ||| |||| | |||| || || ||
Sbjct 39554487 ATTCAGAAAGAATCCACCCTTCACTTGGTTCTTCGACTTCGTGGCGG 39554441
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||||||||| || ||| | ||||| || |||||||| | || ||| |
Sbjct 10996866 ATGCAAATATTTGTTAAGACTCTTACCGGAAAGACCATTACTTTGGAGGTTGAGAGTTCA 10996925
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | | || || ||||| |||||||| || | ||| || |||
Sbjct 10996926 GATACCATTGACAATGTCAAGGCTAAGATCCAGGACAAAGAGGGTATTCCCCCAGACCAA 10996985
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || | || | ||| ||||| || || || |||| | | || | || |||||||||
Sbjct 10996986 CAGAGGTTGATCTTTGCAGGTAAGCAACTTGAAGATGGCCGCACTCTCGCTGATTACAAC 10997045
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482
|| ||||| ||||| || | ||| |||||
Sbjct 10997046 ATCCAAAAGGAATCCACCCTCCACTTGGTG 10997075
>seq25
Length=50193149
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| |||||||||||| | || || || || |||||| | || ||| |
Sbjct 28160263 ATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACAATTACCTTGGAGGTCGAGAGTTCG 28160322
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | | || ||| |||||| ||||||||||| | || || |||
Sbjct 28160323 GATACCATTGACAATGTGAAAGCCAAGATTCAGGACAAAGAAGGAATCCCACCAGACCAA 28160382
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|||||| | |||| ||| || ||||| || || |||| ||||| | || ||||| ||
Sbjct 28160383 CAAAGATTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGAACTCTTGCCGATTATAAT 28160442
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || || || |||||
Sbjct 28160443 ATCCAGAAGGAGTCTAC 28160459
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| ||||| ||||| | || ||||| ||||| ||| |||| |||| |
Sbjct 28159807 ATGCAAATCTTTGTTAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGTTCA 28159866
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|| || | | | || || ||||| || || ||||| | || ||||||
Sbjct 28159867 GACACCATTGATAATGTGAAGGCTAAGATCCAAGATAAGGAAGGGATCCCACCGGATCAG 28159926
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| || ||||| || ||||||| | | || | || || ||||||
Sbjct 28159927 CAGAGGCTTATATTTGCTGGCAAACAACTTGAGGATGGCCGCACGCTAGCCGACTACAAC 28159986
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499
||||| |||||||| || | ||| |||| | |||| || || ||
Sbjct 28159987 ATTCAGAAAGAATCCACCCTTCACTTGGTTCTTCGACTTCGTGGCGG 28160033
>seq11
Length=95484752
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| || || || || |||||||| || | || |||| | |
Sbjct 29434889 ATGCAGATTTTCGTCAAGACGTTGACTGGGAAAACCATAACTTTGGAGGTGGAGAGTTCC 29434948
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| ||| | | || || ||||||| ||||||||||| | || |||||
Sbjct 29434949 GATACGATCGACAATGTTAAGGCGAAGATTCAGGACAAAGAAGGAATTCCACCAGATCAG 29435008
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||| | |||| || || ||||| |||| |||| || || |||| ||||||||
Sbjct 29435009 CAAAGGTTGATTTTCGCTGGGAAACAATTGGAAGATGGAAGGACTTTGGCTGATTACAAT 29435068
Query 110453 ATTCAAAAAGAATCTAC 110469
||||| || ||||| ||
Sbjct 29435069 ATTCAGAAGGAATCCAC 29435085
>seq1
Length=92291805
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| ||||| || |||||| | || ||||| ||||| ||| |||| ||| |
Sbjct 4397756 ATGCAGATATTCGTGAAAACTCTTACTGGCAAGACCATCACCCTCGAGGTGGAAAGTTCT 4397697
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || || ||||| ||||| ||||| | || || |||
Sbjct 4397696 GATACAATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGACCAA 4397637
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| ||||||||||| || |||| | |||| | ||||||||||||
Sbjct 4397636 CAGAGGCTTATCTTTGCCGGTAAACAGCTTGAAGATGGCCGAACTCTTGCGGATTACAAC 4397577
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || |||| |||||
Sbjct 4397576 ATCCAGAAAG--TCTAC 4397562
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/197 (70%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| ||||| || |||||| | || ||||| ||||| ||| |||| ||| |
Sbjct 4403371 ATGCAGATATTCGTGAAAACTCTTACTGGCAAGACCATCACCCTCGAGGTGGAAAGTTCT 4403312
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || || ||||| ||||| ||||| | || || |||
Sbjct 4403311 GATACAATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCAGACCAA 4403252
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| ||||||||||| || |||| | |||| | ||||||||||||
Sbjct 4403251 CAGAGGCTTATCTTTGCCGGTAAACAGCTTGAAGATGGCCGAACTCTTGCGGATTACAAC 4403192
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || |||| |||||
Sbjct 4403191 ATCCAGAAAG--TCTAC 4403177
Score = 87.8 bits (96), Expect = 1e-12
Identities = 138/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331
|||||| || || || ||||| |||| || || ||||| ||| | || ||| ||
Sbjct 83839250 AATGCAGATCTTCGTGAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTCGAGTCTTC 83839309
Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391
||| || ||| | | || ||| ||||| |||||||||||| | ||| ||| ||
Sbjct 83839310 CGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAAGAAGGCATCCCCCCGGACCA 83839369
Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451
|||| | || || | || ||||| || || || |||| | | || | || || |||||
Sbjct 83839370 ACAACGCCTCATCTTCGCCGGTAAGCAACTCGAAGATGGCCGCACCCTAGCCGACTACAA 83839429
Query 110452 CATTCAAAAAGAATCTAC 110469
||| ||||| ||||| ||
Sbjct 83839430 CATCCAAAAGGAATCCAC 83839447
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| |||||||| ||||| | || ||||| ||||| ||| |||| ||| |
Sbjct 4409799 ATGCAGATATTTGTGAAAACCCTTACTGGCAAGACCATCACCCTCGAGTTGGAAAGTTCT 4409740
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
||||| | | | || || ||||| ||||| ||||| | || || |||
Sbjct 4409739 GATACGATTGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCTCCAGACCAA 4409680
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
|| || ||||| | ||| |||||||| || || |||| | |||| | || |||||||||
Sbjct 4409679 CAGAGGCTTATCTTTGCAGGTAAACAACTTGAAGATGGCCGAACCCTCGCTGATTACAAC 4409620
Query 110453 ATTCAAAAAGAATCTAC 110469
|| || ||||| |||||
Sbjct 4409619 ATCCAGAAAGAGTCTAC 4409603
>seq15
Length=91555666
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/229 (68%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
|||||||| || ||||| || | ||||| || ||||| || | || |||| |
Sbjct 15032148 ATGCAAATTTTCGTCAAGACCCTCACCGGAAAGACCATCACATTGGAGGTGGAGAGTTCT 15032089
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|||||| | | | | ||||| |||||| ||||| |||||| | ||| || ||
Sbjct 15032088 GATACTATTGACAATGTAAAGGCCAAGATTCAGGACAAGGAAGGCATCCCCCCAGACCAG 15032029
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||||| | || | || ||||| || || ||||||| | | || |||| |||||||||
Sbjct 15032028 CAAAGGTTGATCTTCGCTGGTAAGCAACTTGAGGATGGCCGCACGTTGGCTGATTACAAC 15031969
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501
|| || || || || || | ||| | ||| | | || || || ||||
Sbjct 15031968 ATCCAGAAGGAGTCCACACTCCACTTAGTGCTTCGCCTCCGTGGAGGAA 15031920
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412795571773964
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |