Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq19 102 7e-17 seq23 100 2e-16 seq48 96.9 3e-15 seq24 87.8 1e-12 seq168 84.2 2e-11 seq25 84.2 2e-11 seq14 84.2 2e-11 seq13 84.2 2e-11 seq1 84.2 2e-11 >seq19 Length=70911690 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| ||||| | || || || ||||| ||| | || |||| ||| Sbjct 3146384 ATGCAGATCTTTGTAAAAACCCTTACTGGTAAGACCATCACCCTTGAGGTGGAGAGCTC- 3146326 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||||| ||| | || || ||||| || || ||||| | || ||||| Sbjct 3146325 CGATACTATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCACCAGATCA 3146266 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | |||| ||| || || ||||| ||||| | | ||| | ||||| || || Sbjct 3146265 GCAGAGGTTGATTTTTGCCGGAAAGCAGCTCGAGGATGGGAGGACACTTGCGGATTATAA 3146206 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| ||||||||||| || ||||| ||||| || || |||| || |||| Sbjct 3146205 CATCCAAAAGGAGTCAACCCTGCACTTGGTGCTGCGACTGCGTGGTGGAA 3146156 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || || || || ||||| || || |||||||| ||| | || |||| ||| | Sbjct 3145016 ATGCAGATATTCGTGAAGACTTTGACTGGGAAAACCATCACCCTGGAGGTGGAGAGCTCG 3144957 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || ||| |||||| || || || || | || || || Sbjct 3144956 -GACACGATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCA 3144898 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | |||| ||| || || ||||| ||||| | | ||| | |||||||| || Sbjct 3144897 GCAGAGGTTGATTTTTGCCGGAAAGCAGCTTGAGGATGGGAGGACACTTGCGGACTATAA 3144838 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||||||||| || || |||| |||| ||| Sbjct 3144837 CATTCAAAAGGAATCCACCCTGCATTTGGTTTTG 3144804 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || || || || ||||| || || |||||||| ||| | || |||| ||| | Sbjct 3145244 ATGCAGATATTCGTGAAGACTTTGACTGGGAAAACCATCACCCTGGAGGTGGAGAGCTCG 3145185 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || ||| |||||| || || || || | || || || Sbjct 3145184 -GACACGATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCA 3145126 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | |||| ||| || || ||||| ||||| | | ||| | |||||||| || Sbjct 3145125 GCAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGGAGGACACTTGCGGACTATAA 3145066 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||||||||| || || |||| |||| ||| Sbjct 3145065 CATTCAAAAGGAATCCACCCTGCATTTGGTTTTG 3145032 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || || || || ||||| || || |||||||| ||| | || |||| ||| | Sbjct 3145472 ATGCAGATATTCGTGAAGACTTTGACTGGGAAAACCATCACCCTGGAGGTGGAGAGCTCG 3145413 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || ||| |||||| || || || || | || || || Sbjct 3145412 -GACACGATTGACAATGTGAAAGCTAAGATTCAGGACAAGGAGGGGATTCCTCCAGACCA 3145354 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | |||| ||| || || ||||| ||||| | | ||| | |||||||| || Sbjct 3145353 GCAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGGAGGACACTTGCGGACTATAA 3145294 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||||||||| || || |||| |||| ||| Sbjct 3145293 CATTCAAAAGGAATCCACCCTGCATTTGGTTTTG 3145260 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || || || || || || || || |||||||| || | || ||| ||| | Sbjct 3145928 ATGCAGATATTCGTTAAGACCTTGACTGGTAAAACCATAACACTGGAGGTCGAGAGCTCG 3145869 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || || | | | | || ||| |||||| || || || || | || || || Sbjct 3145868 -GACACCATTGACAATGTTAAAGCGAAGATTCAGGACAAGGAGGGAATTCCTCCAGACCA 3145810 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | |||| ||| || || ||||| ||||| | | ||| | |||||||| || Sbjct 3145809 GCAGAGGTTGATTTTTGCTGGAAAGCAGCTTGAGGATGGGAGGACACTCGCGGACTATAA 3145750 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| ||||||||||| || ||||| |||| ||| || | ||||| || Sbjct 3145749 CATCCAAAAGGAGTCCACCCTGCACTTGGTTTTGCGACTTCGAGGAGG 3145702 >seq23 Length=61753794 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || |||||||| || || || || |||||||| ||| | || ||| ||| | Sbjct 11031272 ATGCAGATATTTGTCAAGACCTTGACTGGGAAAACCATCACCCTGGAGGTTGAGAGCTCG 11031331 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | | |||||| ||||||| || || || || | ||| |||||| Sbjct 11031332 -GATACGATTGACAATGTAAAAGCAAAGATTCAGGACAAGGAGGGAATTCCCCCGGATCA 11031390 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | || | ||| || || ||| ||||||||| ||| | || |||||||| Sbjct 11031391 GCAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAGGACGGTCGAACCCTAGCTGACTACAA 11031450 Query 107735 CATTCAAAAGGAGTCTACGTTGCA 107758 || || ||||||||||| |||| Sbjct 11031451 TATCCAGAAGGAGTCTACTCTGCA 11031474 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 |||||| || ||||| |||||||| || || ||||||||||| | || |||| ||| Sbjct 11031043 AATGCAGATATTTGTGAAAACTTTGACCGGTAAAACCATTACGTTGGAGGTGGAGAGCTC 11031102 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||| || || | | || || ||||| ||||| || || | || || | Sbjct 11031103 -CGACACGGTTGATAATGTTAAGGCCAAGATCCAAGATAAGGAGGGTATCCCACCTGACC 11031161 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 | ||||| | |||| ||| || || ||||| ||||||| | || | |||||||| | Sbjct 11031162 AACAGAGGTTGATTTTTGCCGGAAAGCAGCTCGAGGACGGGAGGACTCTTGCGGACTATA 11031221 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 |||||||||||||||| || |||| |||| ||| Sbjct 11031222 ACATTCAAAAGGAGTCGACCCTGCATTTGGTTTTG 11031256 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||||||||||||||| || | || ||||| || || ||| | || ||| ||| Sbjct 10996166 ATGCAAATTTTTGTCAAGACCCTGACCGGCAAGACTATCACCCTTGAGGTGGAAAGCTC- 10996224 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | || || |||||| ||||||||||| | || |||| Sbjct 10996225 CGACACCATCGATAATGTCAAGGCAAAGATCCAAGATAAAGAAGGAATCCCACCAAATCA 10996284 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| ||||| | ||| |||| ||||| || | | ||| | || |||||||| Sbjct 10996285 ACAGAGGCTTATCTTTGCTAGTAAGCAGCTAGAATATGGTCGTACACTTGCTGACTACAA 10996344 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 |||||| |||||||| || ||||| |||| Sbjct 10996345 CATTCAGAAGGAGTCCACCCTGCACTTGGT 10996374 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| ||||| | || ||||| ||||| ||| |||| |||| | Sbjct 39554667 ATGCAAATCTTTGTTAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGTTCA 39554608 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| ||||| ||||| | || ||||||| Sbjct 39554607 GACACCATTGATAATGTGAAGGCTAAGATCCAAGATAAGGAAGGGATCCCACCGGATCAG 39554548 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||| | ||| || ||||| || ||||| | | || | || ||||||||| Sbjct 39554547 CAGAGGCTTATCTTTGCTGGCAAACAACTTGAGGATGGCCGCACGCTAGCCGACTACAAC 39554488 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| || || || || | ||| |||| Sbjct 39554487 ATTCAGAAAGAATCCACCCTTCACTTGGT 39554459 >seq48 Length=1435396 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||||||||| || || | ||||| || || || ||| | ||| ||| | Sbjct 1250523 ATGCAAATTTTTGTGAAGACCCTCACAGGAAAGACTATAACCTTGGAAGTTGAGAGTTCT 1250582 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | |||||| ||||||| || || || || | ||| ||||||| Sbjct 1250583 GATACGATTGACAATGTAAAAGCAAAGATTCAGGACAAGGAGGGAATTCCCCCGGATCAG 1250642 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | || | ||| || || ||| ||||||||| ||| | || |||||||| Sbjct 1250643 CAGAGGTTGATCTTTGCTGGGAAGCAGTTGGAGGACGGTCGAACTCTAGCTGACTACAAT 1250702 Query 107736 ATTCAAAAGGAGTCTACGTTGCA 107758 || || ||||||||||| |||| Sbjct 1250703 ATCCAGAAGGAGTCTACTCTGCA 1250725 Score = 93.3 bits (102), Expect = 3e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||||||||| ||||| || | || ||||| ||||| ||| | || ||| ||| Sbjct 1229072 ATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTGGAAAGCTC- 1229130 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | || || ||||| ||||||||||| | || ||||| Sbjct 1229131 CGACACCATCGATAATGTCAAGGCCAAGATCCAAGATAAAGAAGGAATCCCACCAGATCA 1229190 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| ||||| | ||| ||||| ||||| ||||| | ||| | || |||||||| Sbjct 1229191 ACAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAGGATGGTCGTACACTTGCTGACTACAA 1229250 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGT 107764 |||||| |||||||| || | ||| |||| Sbjct 1229251 CATTCAGAAGGAGTCCACCCTCCACTTGGT 1229280 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| ||||| | || || |||||||| || | || |||| | Sbjct 1250295 ATGCAGATCTTTGTAAAAACGCTCACTGGAAAAACCATCACTTTAGAGGTGGAGAGTTCT 1250354 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || || |||||| || || || ||| | || || ||| Sbjct 1250355 GATACAATTGATAACGTTAAGGCCAAGATTCAGGACAAGGAGGGCATCCCACCTGACCAG 1250414 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | |||| ||| || |||||||| || || | || ||| | || ||||| ||| Sbjct 1250415 CAGAGGTTGATTTTTGCTGGGAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAAC 1250474 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 ||||||||||||||||| | || |||||||| Sbjct 1250475 ATTCAAAAGGAGTCTACCCTCCATTTGGTGTTG 1250507 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| |||||||| || ||| | || || |||||||| ||| | ||| ||| ||| Sbjct 1229756 ATGCAGATTTTTGTGAAGACTCTTACCGGGAAAACCATCACCTTGGAAGTTGAGAGCTT- 1229814 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| ||| | | | | || || || || || || ||||| | || || || Sbjct 1229815 CGACACTATTGACAATGTCAAGGCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGACCA 1229874 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| | |||| |||||||| ||||| || || | || ||| | || |||||||| Sbjct 1229875 ACAGAGGTTGATTTTCGCGGGTAAGCAGCTTGATGATGGCAGGACACTTGCAGACTACAA 1229934 Query 107735 CATTCAAAAGGAGTCTAC 107752 ||||||||||||||| || Sbjct 1229935 CATTCAAAAGGAGTCGAC 1229952 >seq24 Length=55877068 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| || ||||| || || || |||||||| | || ||| | Sbjct 24584307 AATGCAAATTTTTGTTAAGACTTTGACTGGGAAGACCATTACATTGGAGGTAGAGAGTTC 24584366 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | | || || ||| ||| || || || || | ||| || || Sbjct 24584367 AGATACCATTGACAATGTTAAGGCAAAAATTCAGGACAAGGAGGGAATCCCCCCAGACCA 24584426 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| || |||| ||| ||||| || |||||||| | | || |||| ||||| || Sbjct 24584427 ACAGAGGCTGATTTTTGCTGGTAAGCAACTGGAGGATGGCCGTACCCTGGCTGACTATAA 24584486 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 ||| || |||||||| || | ||| ||||| Sbjct 24584487 CATCCAGAAGGAGTCCACCCTCCACTTGGTG 24584517 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||| ||||| || | || ||||| ||||| ||| | || ||| | Sbjct 24583852 ATGCAAATTTTCGTCAAGACCCTCACTGGCAAGACCATCACCCTTGAGGTGGAAAGTTCT 24583911 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | ||||| ||||| || || ||||| | || || || Sbjct 24583912 GATACCATCGACAATGTAAAGACCAAGATCCAAGACAAGGAAGGGATCCCACCAGACCAA 24583971 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||| | ||| ||||||||||||||||| | | || | || ||||||||| Sbjct 24583972 CAGAGGCTTATCTTTGCTGGTAAACAGCTGGAGGATGGCCGTACCCTTGCTGACTACAAC 24584031 Query 107736 ATTCAAAAGGAGTCTAC 107752 || || ||||| || || Sbjct 24584032 ATCCAGAAGGAATCCAC 24584048 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||||||||||||||| || | || || || ||||| || | || |||| | Sbjct 24584080 ATGCAAATTTTTGTCAAGACCCTCACCGGAAAGACCATCACATTGGAGGTGGAGAGTTCT 24584139 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | | || || |||||| || || |||||| | ||| || ||| Sbjct 24584140 GATACGATTGACAATGTCAAGGCCAAGATTCAGGACAAGGAAGGCATCCCCCCAGACCAG 24584199 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || || || || | || ||||| || || ||||| | | ||| |||| || |||||| Sbjct 24584200 CAAAGGCTGATCTTCGCTGGTAAGCAACTTGAGGATGGCCGCACATTGGCTGATTACAAC 24584259 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || | ||| ||||| Sbjct 24584260 ATCCAGAAGGAGTCCACACTCCACTTGGTG 24584289 >seq168 Length=529997 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || || ||||| ||||| || || || |||||||| | ||| |||| ||| | Sbjct 131603 ATGCAGATCTTCGTCAAGACTTTGACCGGTAAGACCATTACTTTAGAAGTGGAGAGCTCG 131662 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| | | | || ||| |||||| || |||||||| | || | ||| Sbjct 131663 -GATACGATTGATAACGTGAAAGCGAAGATTCAGGACAAAGAAGGAATTCCACCAGGTCA 131721 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| || | |||| ||| || ||||||||||| || | | || |||| | ||||| Sbjct 131722 GCAAAGGTTGATTTTTGCTGGGAAACAGCTGGAAGATGGAAGGACTTTGGCTAATTACAA 131781 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||||||||||| || Sbjct 131782 TATTCAAAAGGAGTCCAC 131799 >seq25 Length=50193149 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| ||||| ||||| | || ||||| ||||| ||| |||| |||| | Sbjct 28159807 ATGCAAATCTTTGTTAAAACCCTCACTGGCAAGACCATCACCCTCGAGGTGGAGAGTTCA 28159866 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| ||||| ||||| | || ||||||| Sbjct 28159867 GACACCATTGATAATGTGAAGGCTAAGATCCAAGATAAGGAAGGGATCCCACCGGATCAG 28159926 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| ||||| | ||| || ||||| || ||||| | | || | || ||||||||| Sbjct 28159927 CAGAGGCTTATATTTGCTGGCAAACAACTTGAGGATGGCCGCACGCTAGCCGACTACAAC 28159986 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 ||||| || || || || | ||| |||| Sbjct 28159987 ATTCAGAAAGAATCCACCCTTCACTTGGT 28160015 >seq14 Length=44799946 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA-AACGGAGGCTGG 107614 ||||| ||||||||||| ||||| || |||||||| || ||| | || | | ||| Sbjct 8848130 ATGCAGATTTTTGTCAAGACTTTGACCGGCAAAACAATCACCTTGGAGGTTGAAAGCT-C 8848072 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | | || || ||||||| ||||| ||||| | || ||||| Sbjct 8848071 CGATACCATTGACAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCA 8848012 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| || || || | ||| || ||||| |||| || | | || |||| || || || Sbjct 8848011 GCAAAGGCTCATCTTTGCCGGCAAACAATTGGAAGATGGGAGGACTTTGGCTGATTATAA 8847952 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||| || |||||||| Sbjct 8847951 CATTCAGAAAGAGTCTAC 8847934 >seq13 Length=56485995 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGA-AACGGAGGCTGG 107614 ||||| ||||||||||| ||||| ||||||||||| || ||| | || | | ||| Sbjct 54271004 ATGCAGATTTTTGTCAAGACTTTGACAGGCAAAACAATCACCTTGGAGGTTGAAAGCT-C 54271062 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| | | | | || || ||||||| ||||| ||||| | || ||||| Sbjct 54271063 CGATACCATTGACAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCA 54271122 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | || || | ||| || ||||| |||| || | | || |||| || || || Sbjct 54271123 GCAAATGCTCATCTCTGCCGGCAAACAATTGGAAGATGGGAGGACTTTGGCTGATTATAA 54271182 Query 107735 CATTCAAAAGGAGTCTAC 107752 |||||| || |||||||| Sbjct 54271183 CATTCAGAAAGAGTCTAC 54271200 >seq1 Length=92291805 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || ||||| ||||| | || || |||||||| || | || |||| | Sbjct 4409571 ATGCAGATATTTGTAAAAACCCTCACCGGAAAAACCATCACTTTGGAGGTGGAGAGTTCT 4409512 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| | | | || || |||||| || || || || | || |||||| Sbjct 4409511 GATACCATTGATAATGTTAAGGCGAAGATTCAGGACAAGGAGGGTATCCCACCAGATCAG 4409452 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| | |||| ||| || || ||||| ||||| | | || | ||||| || ||| Sbjct 4409451 CAGAGGTTGATTTTTGCCGGAAAGCAGCTCGAGGATGGGAGGACGCTTGCGGATTATAAC 4409392 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 || ||||||||||| || ||||| ||||| || || |||| || |||| Sbjct 4409391 ATCCAAAAGGAGTCAACCCTGCACTTGGTGCTGCGACTGCGTGGTGGAA 4409343 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 ||||| || ||||| ||||| | || || |||||||| ||| | || ||| ||| Sbjct 4410027 ATGCAGATCTTTGTGAAAACCCTTACTGGTAAAACCATCACCCTTGAGGTGGAAAGCTC- 4409969 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||||| | | | || || || || || ||||||||| | || || || Sbjct 4409968 CGATACTATTGATAATGTCAAGGCCAAAATCCAAGACAAAGAAGGCATTCCTCCAGACCA 4409909 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||||| ||||||| ||| || ||||| || ||||| | | ||| | || |||||||| Sbjct 4409908 ACAGAGGCTTATTTTTGCCGGAAAACAACTCGAGGATGGCCGAACTCTTGCCGACTACAA 4409849 Query 107735 CATTCAAAAGGAGTCTAC 107752 ||| ||||||||||| || Sbjct 4409848 CATCCAAAAGGAGTCCAC 4409831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398832328726972