Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq17 102 5e-17 seq1 102 5e-17 seq19 98.7 7e-16 seq27 93.3 3e-14 seq11 91.5 1e-13 seq23 89.7 3e-13 seq18 86.0 4e-12 seq168 84.2 1e-11 seq48 84.2 1e-11 seq25 84.2 1e-11 seq6 84.2 1e-11 seq4 84.2 1e-11 >seq17 Length=39386523 Score = 102 bits (112), Expect = 5e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 |||||| || | || || ||| || || || ||||||||||||| | || || | Sbjct 31748554 ACGTAAGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCC 31748495 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 ||| || | ||||||||||| || || | ||||||||| ||| | || | ||||| || Sbjct 31748494 GTCCTCGAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTT 31748435 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| |||||| ||| |||| ||| | ||||||| || || || | |||| Sbjct 31748434 GTCTTGAATTTTAGACTTC-ACATTGTCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGA 31748376 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || ||||| ||||| || |||||||||||| Sbjct 31748375 TGGTCTTGCCGGTTAAGGTTTTGACGAAGATCTGCATA 31748338 Score = 84.2 bits (92), Expect = 1e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || ||||||||||||| | || || |||| || | ||||||||||| || Sbjct 31748301 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 31748242 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | ||||||||| ||| | || | ||||| ||||| |||||| ||| |||| Sbjct 31748241 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTC-ACATT 31748183 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | |||||| || || || | ||||| || || || || | ||||| || Sbjct 31748182 GTCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGAC 31748123 Query 33738 AAAGATCTGCATAGTTGG 33755 ||||||||||| |||| Sbjct 31748122 GAAGATCTGCATCTTTGG 31748105 >seq1 Length=92291805 Score = 102 bits (112), Expect = 5e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | ||| | || | || || ||| ||| ||||| |||||||| |||| Sbjct 4409801 CCACCCCTTAGACGAAGGACTAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCA 4409860 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | |||||||||||||||||| | | ||| || ||| | || Sbjct 4409861 AGAGTTCGGCCATCCTCGAGTTGTTTTCCGGCAAAAATAAGCCTCTGTTGGTCTGGAGGA 4409920 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| | | |||| || | || ||| |||||| Sbjct 4409921 ATGCCTTCTTTGTCTTGGATTTT-GGCCTTGACATTATCAATAGTATCGGAGCTTTCCAC 4409979 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| |||||||| || | ||||| |||||||||||||| Sbjct 4409980 CTCAAGGGTGATGGTTTTACCAGTAAGGGTTTTCACAAAGATCTGCAT 4410027 Score = 98.7 bits (108), Expect = 7e-16 Identities = 168/240 (70%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | || || | |||||| || || || ||| ||||| ||| Sbjct 4409333 AAAATCTGCATTCCACCACGCAGTCGCAGCACCAAGTGCAGGGTTGACTCCTTTTGGATG 4409392 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 || ||||| | || || | | || || | || ||||||||||||||||| | |||| Sbjct 4409393 TTATAATCCGCAAGCGTCCTCCCATCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGC 4409452 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 |||||| | || | ||| || ||||| ||| ||| | | ||||| || | ||| || Sbjct 4409453 TGATCTGGTGGGATACCCTCCTTGTCCTGAATCTTC-GCCTTAACATTATCAATGGTATC 4409511 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| || | ||||| ||||| || || | ||||||||||| |||||||| Sbjct 4409512 AGAACTCTCCACCTCCAAAGTGATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 4409571 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 ||||| || | ||| || || || ||||| ||||| || || | ||||| | | Sbjct 4396670 CGTAAAACTAGATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCA 4396729 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || ||||| ||||||||||| | |||||| ||| | || | || || ||| Sbjct 4396730 TCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTG 4396789 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTGA 33712 || ||||||| |||| |||| ||| |||||||| | | | || || || | |||| Sbjct 4396790 TCCTGAATTTTCGCTTTC-ACATTGTCAACGGTGTC-CGAGCTCTCGACCTCCAGGGTGA 4396847 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||||||| || || || || || || |||||||| Sbjct 4396848 TGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 4396884 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 ||||| || ||||| || || || ||||| ||||| || || | ||||| | | Sbjct 4402285 CGTAAAACTAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCA 4402344 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || ||||| ||||||||||| | |||||| ||| | || | || || ||| Sbjct 4402345 TCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTG 4402404 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTGA 33712 || ||||||| |||| |||| ||| | |||||| | | | || || || | |||| Sbjct 4402405 TCCTGAATTTTCGCTTTC-ACATTGTCAATGGTGTC-CGAGCTCTCGACCTCCAGGGTGA 4402462 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||||||| || || || || || || |||||||| Sbjct 4402463 TGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 4402499 Score = 84.2 bits (92), Expect = 1e-11 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | || || |||||||| || ||| || ||||| ||||| || || | Sbjct 4408889 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGGATGTTATAGTCCGCA 4408948 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | || ||||||||||||||||| | |||||| ||| | || Sbjct 4408949 AGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 4409008 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCA 33700 | || || ||||| ||| ||| | || ||||| ||| | |||||| | | | || | Sbjct 4409009 ATTCCCTCCTTGTCCTGAATCTTC-GCTTTAACATTGTCAATGGTGTC-CGAGCTCTCGA 4409066 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || | |||||||| || | || || || || |||||||| Sbjct 4409067 CCTCCAGTGTTACGGTTTTACCAGTCAGGGTCTTAACGAATATCTGCAT 4409115 >seq19 Length=70911690 Score = 98.7 bits (108), Expect = 7e-16 Identities = 155/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 ||||| |||||||| || || |||||||| ||||| || || | ||||| | | Sbjct 3137280 CGTAAAACCAAATGCAGGGTCGATTCTTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCC 3137339 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || || |||||||||||||| | |||||| ||| | || | || || ||| Sbjct 3137340 TCCTCAAGCTGCTTCCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTG 3137399 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTGA 33712 || ||||||| | || |||| ||| | |||||| | | | || || || | |||| Sbjct 3137400 TCCTGAATTTTC-GCTTTGACATTGTCAATGGTGTC-CGAGCTCTCGACCTCCAGGGTGA 3137457 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||||||| || || || || || || |||||||| Sbjct 3137458 TGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 3137494 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | || || |||||||| || ||| || ||||| ||||| || || | Sbjct 3145474 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCGCA 3145533 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | || || | || ||||| ||||||||||| | |||||| ||| | || Sbjct 3145534 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 3145593 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCA 33700 | || || ||||| ||| ||| | || ||||| ||| | |||||| | | | || | Sbjct 3145594 ATTCCCTCCTTGTCCTGAATCTTC-GCTTTAACATTGTCAATGGTGTC-CGAGCTCTCGA 3145651 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || |||||||| || || || || ||||| |||||||| Sbjct 3145652 CCTCCAGTGTTATGGTTTTACCAGTCAAGGTCTTAACAAATATCTGCAT 3145700 Score = 93.3 bits (102), Expect = 3e-14 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | || || |||||||| || ||| || ||||| ||||| || || | Sbjct 3144790 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCGCA 3144849 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | || || | || ||||||||||||||||| | |||||| ||| | || Sbjct 3144850 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 3144909 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCA 33700 | || || ||||| ||| || |||| |||| ||| | ||||| | | | |||| Sbjct 3144910 ATCCCCTCCTTGTCCTGAATCTTAGCTTTC-ACATTGTCAATCGTGTC-CGAGCTCTCCA 3144967 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| || || || || || || || |||||||| Sbjct 3144968 CCTCCAGGGTGATGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 3145016 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 33535 CGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCG 33594 || || ||||| || || ||| ||| ||||| ||||| || || | |||||| | | Sbjct 3145714 CGCAAAACCAAGTGCAGGGTGGACTCCTTTTGGATGTTATAGTCCGCGAGTGTCCTCCCA 3145773 Query 33595 TCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTG 33654 || || | || ||||| ||||||||||| | |||||| ||| | || | || || ||| Sbjct 3145774 TCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATTCCCTCCTTG 3145833 Query 33655 TCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCACGTCAACCGTGA 33712 || ||| ||| | || ||||| ||| | |||||| | | | || || || | || | Sbjct 3145834 TCCTGAATCTTC-GCTTTAACATTGTCAATGGTGTC-CGAGCTCTCGACCTCCAGTGTTA 3145891 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||||||| || || || || || || |||||||| Sbjct 3145892 TGGTTTTACCAGTCAAGGTCTTAACGAATATCTGCAT 3145928 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | || || |||||||| || ||| || ||||| ||||| || || | Sbjct 3145018 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCGCA 3145077 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | || || | || ||||| ||||||||||| | |||||| ||| | || Sbjct 3145078 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 3145137 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCA 33700 | || || ||||| ||| || |||| |||| ||| | ||||| | | | |||| Sbjct 3145138 ATCCCCTCCTTGTCCTGAATCTTAGCTTTC-ACATTGTCAATCGTGTC-CGAGCTCTCCA 3145195 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| || || || || || || || |||||||| Sbjct 3145196 CCTCCAGGGTGATGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 3145244 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | || || |||||||| || ||| || ||||| ||||| || || | Sbjct 3145246 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTCCGCA 3145305 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 ||||| | | || || | || ||||| ||||||||||| | |||||| ||| | || Sbjct 3145306 AGTGTCCTCCCATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGA 3145365 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGAT-TCCA 33700 | || || ||||| ||| || |||| |||| ||| | ||||| | | | |||| Sbjct 3145366 ATCCCCTCCTTGTCCTGAATCTTAGCTTTC-ACATTGTCAATCGTGTC-CGAGCTCTCCA 3145423 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| ||||| || || || || || || || |||||||| Sbjct 3145424 CCTCCAGGGTGATGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 3145472 Score = 86.0 bits (94), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| || | ||| | || | || || || |||||| || ||| Sbjct 3137940 AAAATCTGCATCCCACCCCTAAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGGATG 3137999 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| | ||||| | | || || | ||||||||||||||||||||| | |||| Sbjct 3138000 TTGTAATCTGCAAGTGTCCTACCATCTTCGAGTTGTTTTCCGGCAAAAATCAACCTCTGC 3138059 Query 33631 TGATCTTGCGGCACACCTTCTTTGTC 33656 |||||| | || | ||||| ||||| Sbjct 3138060 TGATCTGGTGGAATCCCTTCCTTGTC 3138085 Score = 84.2 bits (92), Expect = 1e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 |||||| || ||||||||||| | ||||| | | || || | ||||||||||||||| Sbjct 3138443 CTCTTTCTGGATGTTGTAATCTGCAAGTGTCCTACCATCTTCGAGTTGTTTTCCGGCAAA 3138502 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC 33656 |||||| | |||||||||| | || | ||||| ||||| Sbjct 3138503 AATCAACCTCTGCTGATCTGGTGGAATCCCTTCCTTGTC 3138541 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | ||| | || | || || ||| ||| ||||| |||||||| |||| Sbjct 3146614 CCACCCCTTAGACGAAGGACTAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCA 3146673 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || | ||||||||||||||| || | | || || ||| | || Sbjct 3146674 AGAGTTCGGCCATCCTCAAGTTGTTTTCCGGCAAAGATAAGCCTTTGTTGGTCTGGAGGA 3146733 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| ||||| | | |||| || | || ||| ||| || Sbjct 3146734 ATCCCTTCTTTGTCTTGGATTTT-GGCCTTGACATTATCGATAGTATCGGAGCTTTCTAC 3146792 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || ||||| || | ||||| |||||||||||||| Sbjct 3146793 CTCAAGGGTGATGGTCTTACCAGTAAGGGTTTTCACAAAGATCTGCAT 3146840 >seq27 Length=3408634 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | |||||| | || | || ||||| ||| ||||| ||||||||||||| Sbjct 2140067 CCACCGCGCAAACGGAGGACGAGGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGCC 2140008 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || |||| || | ||||||||||| || |||| ||||||||| ||| | || Sbjct 2140007 AAGGTCCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGG 2139948 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || ||||| || | || | ||| | |||||| || || Sbjct 2139947 ATGCCTTCCTTATCTTGGATTTT-GGTCTTCACGTTGTCGATCGTGTCGGAGCTCTCGAC 2139889 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||||| || || |||| || || || ||||||||||| Sbjct 2139888 CTCGAGAGTGATCGTCTTGCCGGTTAGAGTCTTGACGAAGATCTGCAT 2139841 >seq11 Length=95484752 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | || |||||| || || || || |||||||| | Sbjct 29435116 ACCACCCCGAAGACGCAAGACAAGGTGGAGAGTGGATTCCTTCTGAATATTGTAATCAGC 29435057 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | | || ||||||||||| || || |||||||| | ||||||||| | || Sbjct 29435056 CAAAGTCCTTCCATCTTCCAATTGTTTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGG 29434997 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||| ||| | | ||||| ||| | || ||| |||| Sbjct 29434996 AATTCCTTCTTTGTCCTGAATCTTC-GCCTTAACATTGTCGATCGTATCGGAACTCTCCA 29434938 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || ||||| || || ||||| || || || |||||||| Sbjct 29434937 CCTCCAAAGTTATGGTTTTCCCAGTCAACGTCTTGACGAAAATCTGCAT 29434889 >seq23 Length=61753794 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||| | || || |||||||| || || ||| ||||| ||||| || || | Sbjct 11031270 CCTCCTCTAAGGCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTCCGCA 11031211 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | |||| || | || ||||||||||||||||| | ||| || || | || Sbjct 11031210 AGAGTCCTCCCGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGG 11031151 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || || || || || | | ||||| || || |||||| ||||| Sbjct 11031150 ATACCCTCCTTATCTTGGATCTT-GGCCTTAACATTATCAACCGTGTCGGAGCTCTCCAC 11031092 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||| || |||||||| || || ||||| ||||| |||||||| Sbjct 11031091 CTCCAACGTAATGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCAT 11031044 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||| ||| || || || || ||||||| || || | | | || || Sbjct 39554003 ACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCAAGAGTCCTTCCATCTTCA 39554062 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||||||| ||||||||||| | || || ||| | || | ||||||||||| | Sbjct 39554063 AGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTCCTGA 39554122 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || |||| |||| || | ||| || ||||| || | || || || || Sbjct 39554123 ATCTTGGCTTTC-ACATTATCAATGGTATCCGAACTCTCCACCTCCAAGGTAATTGTCTT 39554181 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| |||||||| ||||| Sbjct 39554182 TCCAGTGAGAGTTTTGACAAAGATTTGCAT 39554211 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || || ||| || ||||| ||||||||||| | Sbjct 10997093 ACCACCACAAAGACGAAGCACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGC 10997034 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | ||| || || ||||| ||||| | ||| || ||| | || Sbjct 10997033 GAGAGTGCGGCCATCTTCAAGTTGCTTACCTGCAAAGATCAACCTCTGTTGGTCTGGGGG 10996974 Query 33642 CACACCTTCTTTGTC 33656 | ||| |||||||| Sbjct 10996973 AATACCCTCTTTGTC 10996959 >seq18 Length=57801308 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| || || | || |||||| || || || || |||||||| | Sbjct 49489142 ACCACCACGAAGACGCAAGACAAGGTGGAGAGTGGATTCCTTCTGAATATTGTAATCAGC 49489083 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | || | | | || ||||| ||||| || || |||||||| | ||||||||| | || Sbjct 49489082 CAAAGTCCTTCCATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGG 49489023 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||||||||| ||| ||| | | ||||| ||| | || ||| |||| Sbjct 49489022 AATCCCTTCTTTGTCCTGAATCTTC-GCCTTAACATTGTCGATCGTATCGGAACTCTCCA 49488964 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | || || ||||| || || ||||| || || || |||||||| Sbjct 49488963 CCTCCAAAGTTATGGTTTTCCCAGTCAACGTCTTGACGAAAATCTGCAT 49488915 >seq168 Length=529997 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | || | || ||||| ||| ||||| ||||||||||||| Sbjct 131145 CCACCGCGCAGACGGAGGACGAGGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGCC 131086 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || |||| || | ||||||||||| || |||| ||||||||| ||| | || Sbjct 131085 AAGGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGG 131026 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || ||||| ||| || | ||| | || ||| || || Sbjct 131025 ATGCCTTCCTTATCTTGGATTTTGGCCTTC-ACGTTGTCGATCGTATCGGAGCTCTCGAC 130967 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | |||||||| || || |||| || || || ||||||||||| Sbjct 130966 CTCGAGAGTGATCGTCTTGCCGGTTAGAGTCTTAACGAAGATCTGCAT 130919 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || | |||||| | || | || ||||| ||| || || |||||||| |||| Sbjct 131373 CCGCCGCGCAAACGAAGGACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 131314 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | || || |||| || | ||||||||||||||| || | ||| ||||| ||| | || Sbjct 131313 AAGGTACGGCCGTCTTCGAGTTGTTTTCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGG 131254 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || ||| | || ||| | ||| | |||||| || || Sbjct 131253 ATGCCTTCCTTGTCTTGGATCTTC-GCTTTAACGTTGTCGATCGTGTCGGAGCTCTCGAC 131195 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || || ||||| || ||||| ||||| Sbjct 131194 CTCGAGAGTGATTGTCTTGCCAGTCAAGGTTTTCACGAAGATTTGCAT 131147 >seq48 Length=1435396 Score = 84.2 bits (92), Expect = 1e-11 Identities = 150/215 (70%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||||||| || ||| ||| ||||| ||||||||||| | || || | | || || Sbjct 1229509 CACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCCAGGGTATGGCCATCTTC 1229450 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 | ||| || |||||||| || | | |||||| ||| | || | ||||||||||| Sbjct 1229449 TAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGGATCCCTTCTTTGTCTTG 1229390 Query 33660 AATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATTCCACGTCAACCGTGATCG 33715 || || | | |||| || | |||||| ||| |||||| |||| ||||| | Sbjct 1229389 GATCTT-GGCCTTGACATTATCAATGGTGTCCGAGCT---TTCCACCTCAAGGGTGATAG 1229334 Query 33716 TTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || || || | || || |||||||| |||||| Sbjct 1229333 TCTTGCCGGTGAGGGTCTTAACAAAGATTTGCATA 1229299 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || || ||| || ||||| ||||||||||| | Sbjct 1229755 ACCACCACGAAGACGAAGCACCAAGTGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGC 1229696 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || || | ||| || |||||||| ||||| | ||| || ||| | || Sbjct 1229695 GAGAGTGCGGCCATCTTCAAGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGGGG 1229636 Query 33642 CACACCTTCTTTGTC 33656 | ||| || ||||| Sbjct 1229635 AATACCCTCCTTGTC 1229621 >seq25 Length=50193149 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33541 ACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCC 33600 |||||||| ||||| ||| || || || || ||||||| || || | | | || || Sbjct 28160471 ACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCAAGAGTTCTTCCATCTTCA 28160412 Query 33601 AATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCA 33660 | ||||||||| ||||||||||| | || || ||| | || | ||||||||||| | Sbjct 28160411 AGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTCCTGA 28160352 Query 33661 ATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTT 33719 || || |||| |||| ||| | ||| || || || || | || || || || Sbjct 28160351 ATCTTGGCTTTC-ACATTGTCAATGGTATCCGAACTCTCGACCTCCAAGGTAATTGTCTT 28160293 Query 33720 ACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| |||||||| ||||| Sbjct 28160292 TCCAGTGAGAGTTTTGACAAAGATTTGCAT 28160263 >seq6 Length=79162310 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || ||||||||||||| | || || | || || | ||||||||||| || Sbjct 21701692 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTTCCGGCGAAG 21701633 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | ||||||||| ||| | || | ||||| ||||| ||||| ||| |||| Sbjct 21701632 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTC-ACATT 21701574 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||||||| || || || | ||||| || || || ||||| ||||| || Sbjct 21701573 ATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGAC 21701514 Query 33738 AAAGATCTGCATA 33750 |||||||||||| Sbjct 21701513 GAAGATCTGCATA 21701501 >seq4 Length=78750349 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || ||||||||||||| | || || | || || | ||||||||||| || Sbjct 57540820 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTTCCGGCGAAG 57540879 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | ||||||||| ||| | || | ||||| ||||| ||||| ||| |||| Sbjct 57540880 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTC-ACATT 57540938 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 || | ||||||| || || || | ||||| || || || ||||| ||||| || Sbjct 57540939 ATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGAC 57540998 Query 33738 AAAGATCTGCATA 33750 |||||||||||| Sbjct 57540999 GAAGATCTGCATA 57541011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328667352380160