Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_025425.1 Length=163424 Score E Sequences producing significant alignments: (Bits) Value seq9 105 7e-18 >seq9 Length=117247901 Score = 105 bits (116), Expect = 7e-18 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 117051 TCAGGAAACGTAGGATGTTTATCATCTTCCGGCAAATAACCGCCATATTCCCACGGATGG 117110 |||||||| |||||||||||||||||||||||| ||||||| || | || ||||| Sbjct 108216542 TCAGGAAAGTGAGGATGTTTATCATCTTCCGGCAACAGACCGCCAAATGCGCAAGGATGA 108216601 Query 117111 AACATGTAATCAGGCTTACGCCACATACTAGAGATAACGCTTACAGGATTCTCTATCATG 117170 || || ||||||| | | |||||| || | ||||| ||||||||||| |||||| Sbjct 108216602 AAGATAAAATCAGGTTGCCTCCACATCGACGACAGGACGCTAACAGGATTCTCGATCATG 108216661 Query 117171 TAGGGAAC 117178 || ||||| Sbjct 108216662 TATGGAAC 108216669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 522769014526720