Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq168 114 1e-20 seq1 98.7 9e-16 seq19 93.3 4e-14 seq6 93.3 4e-14 seq4 93.3 4e-14 seq23 91.5 1e-13 seq17 89.7 5e-13 seq11 89.7 5e-13 seq48 87.8 2e-12 >seq168 Length=529997 Score = 114 bits (126), Expect = 1e-20 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| ||||| |||||||| ||| || ||| || |||||||||||||| |||| Sbjct 131114 TTGACTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGTTTTCCGG 131055 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 |||| |||||||| || |||||||| |||||||| ||||| ||||| |||| Sbjct 131054 CGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTCA 130995 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | ||||||| ||| || |||| || | ||| || || || ||||| | Sbjct 130994 CGTTGTCGATCGTATCGGAGCTCTCGACCTCGAGAGTGATCGTCTTGCCGGTTAGAGTCT 130935 Query 132108 TTATGAAAATCTGCAT 132123 | | ||| |||||||| Sbjct 130934 TAACGAAGATCTGCAT 130919 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 131928 TTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGG 131987 ||||||| || || |||||||||||| || |||||| |||||||| ||||| |||| Sbjct 131342 TTGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCGAGTTGTTTTCCGG 131283 Query 131988 AATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCA 132047 | |||| ||||| || || ||||| || |||||||| || || || || ||| | Sbjct 131282 CAAAGATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTCGCTTTAA 131223 Query 132048 ACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 132107 | || | || |||| ||| || |||| || | || || ||||||| |||| Sbjct 131222 CGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTGATTGTCTTGCCAGTCAAGGTTT 131163 Query 132108 TTATGAAAATCTGCAT 132123 | | ||| || ||||| Sbjct 131162 TCACGAAGATTTGCAT 131147 >seq1 Length=92291805 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| |||||||||||| | || || ||| ||||| ||||| |||| | Sbjct 4409834 GACTCCTTTTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCCTCGAGTTGTTTTCCGGCA 4409893 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | |||||| |||||||| ||||||||||| || ||||| || | Sbjct 4409894 AAAATAAGCCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGGATTTTGGCCTTGACA 4409953 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | |||||||| ||||| || | || | ||||||||||| || ||||| Sbjct 4409954 TTATCAATAGTATCGGAGCTTTCCACCTCAAGGGTGATGGTTTTACCAGTAAGGGTTTTC 4410013 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 4410014 ACAAAGATCTGCAT 4410027 >seq19 Length=70911690 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| |||||||||||| | || || ||| || || ||||| |||| | Sbjct 3138213 GACTCCTTTTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCCTCAAGTTGTTTTCCGGCA 3138272 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | ||||| |||||||| || |||||||| || ||||| || | Sbjct 3138273 AAGATAAGCCTTTGTTGGTCTGGAGGAATCCCTTCTTTGTCTTGGATTTTGGCCTTGACA 3138332 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | |||||||| |||||| || | || | || |||||||| || |||||| Sbjct 3138333 TTATCGATAGTATCGGAGCTCTCCACCTCAAGGGTGATGGTCTTACCAGTAAGGGTTTTT 3138392 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 3138393 ACAAAGATCTGCAT 3138406 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 131908 GCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATG-GTACGCG 131966 ||||||||||||||| | | | || || ||||||||||| ||||| | || | || | | Sbjct 3144801 GCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTC-CGCAAGTGTCCTCC 3144859 Query 131967 AATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTT 132026 ||| || ||||| || |||| | | || | | ||| || |||||||| || || || | Sbjct 3144860 CATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCT 3144919 Query 132027 TATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCA 132086 | || ||| || ||||| | || | || || | |||||| || | || | Sbjct 3144920 TGTCCTGAATCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGA 3144979 Query 132087 GCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||||| ||| || | ||| |||||||| Sbjct 3144980 TGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 3145016 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 131908 GCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATG-GTACGCG 131966 ||||||||||||||| | | | || || ||||||||||| ||||| | || | || | | Sbjct 3145029 GCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTC-CGCAAGTGTCCTCC 3145087 Query 131967 AATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTT 132026 ||| || ||||| || || | | | || | | ||| || |||||||| || || || | Sbjct 3145088 CATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCT 3145147 Query 132027 TATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCA 132086 | || ||| || ||||| | || | || || | |||||| || | || | Sbjct 3145148 TGTCCTGAATCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGA 3145207 Query 132087 GCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||||| ||| || | ||| |||||||| Sbjct 3145208 TGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 3145244 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 131908 GCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATG-GTACGCG 131966 ||||||||||||||| | | | || || ||||||||||| ||||| | || | || | | Sbjct 3145257 GCGCAAAACCAAATGCAGGGTGGATTCCTTTTGAATGTTATAGTC-CGCAAGTGTCCTCC 3145315 Query 131967 AATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTT 132026 ||| || ||||| || || | | | || | | ||| || |||||||| || || || | Sbjct 3145316 CATCCTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCT 3145375 Query 132027 TATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCA 132086 | || ||| || ||||| | || | || || | |||||| || | || | Sbjct 3145376 TGTCCTGAATCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGA 3145435 Query 132087 GCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| ||||||| ||| || | ||| |||||||| Sbjct 3145436 TGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 3145472 >seq6 Length=79162310 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || || |||||||| ||| || |||||| ||||||||||||||| |||| Sbjct 21701695 GATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTTCCGGCG 21701636 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || |||||||| || || ||||| |||| Sbjct 21701635 AAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTCACA 21701576 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| ||| ||||||| || | || || || || | ||||| Sbjct 21701575 TTATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTG 21701516 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 21701515 ACGAAGATCTGCAT 21701502 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||||||||| ||| || |||||| || ||||||||||| |||| Sbjct 21701467 GATTCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCG 21701408 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || |||||||| || || |||||| || | Sbjct 21701407 AAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTTACA 21701348 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||| || |||| || | || || || || || ||||| Sbjct 21701347 TTATCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTG 21701288 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 21701287 ACGAAGATCTGCAT 21701274 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || || || || || ||| || |||||| ||||||||||||||| |||| Sbjct 21701923 GATTCCTTCTGGATATTATAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTGCCGGCG 21701864 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || |||||||| || || ||||| || | Sbjct 21701863 AAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTGACA 21701804 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| ||| ||||||| || | || ||||| || | ||||| Sbjct 21701803 TTGTCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTACCGGTTAAGGTTTTG 21701744 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 21701743 ACGAAGATCTGCAT 21701730 >seq4 Length=78750349 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || || |||||||| ||| || |||||| ||||||||||||||| |||| Sbjct 57540817 GATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCATCTTCGAGCTGTTTTCCGGCG 57540876 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || |||||||| || || ||||| |||| Sbjct 57540877 AAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTCACA 57540936 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| ||| ||||||| || | || || || || | ||||| Sbjct 57540937 TTATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTG 57540996 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 57540997 ACGAAGATCTGCAT 57541010 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||||||||| ||| || |||||| || ||||||||||| |||| Sbjct 57541045 GATTCCTTCTGAATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCG 57541104 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || |||||||| || || |||||| || | Sbjct 57541105 AAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTTACA 57541164 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||| || |||| || | || || || || || ||||| Sbjct 57541165 TTATCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTG 57541224 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 57541225 ACGAAGATCTGCAT 57541238 >seq23 Length=61753794 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 131908 GCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATG-GTACGCG 131966 ||||||||||||||| | | | ||||| ||||||||||| ||||| | || | || | | Sbjct 11031259 GCGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTC-CGCAAGAGTCCTCC 11031201 Query 131967 AATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTT 132026 || |||||||| || |||| | | || | | |||||| || || || || || || | Sbjct 11031200 CGTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCT 11031141 Query 132027 TATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCA 132086 |||| || || || | | || || || |||| |||||| || | ||| | Sbjct 11031140 TATCTTGGATCTTGGCCTTAACATTATCAACCGTGTCGGAGCTCTCCACCTCCAACGTAA 11031081 Query 132087 GCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 |||||||| |||| |||||| | || |||||||| Sbjct 11031080 TGGTTTTACCGGTCAAAGTTTTCACAAATATCTGCAT 11031044 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||||||||||||||||||||| | ||| || |||||| || || ||||||| | Sbjct 11030325 GACTCTTTTTGAATGTTGTAGTCAGCAAGGGTGCGACCATCTTCCAGTTGCTTACCGGCA 11030266 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||| || | ||||||||| ||||| || ||||| ||||| Sbjct 11030265 AAGATAAGCCTCTGTTGATCAGGAGGGATCCCTTCCTTATC 11030225 >seq17 Length=39386523 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || || |||||||| ||| || |||||| || ||||||||||| |||| Sbjct 31748532 GATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCG 31748473 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || |||||||| || || |||||| |||| Sbjct 31748472 AAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACA 31748413 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| ||| ||||||| || | || || || || | ||||| Sbjct 31748412 TTGTCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTG 31748353 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 31748352 ACGAAGATCTGCAT 31748339 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || || |||||||| ||| || |||||| || ||||||||||| |||| Sbjct 31748304 GATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCG 31748245 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || |||||||| || || |||||| |||| Sbjct 31748244 AAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACA 31748185 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||| || |||| || | || || || || || ||||| Sbjct 31748184 TTGTCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTG 31748125 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 31748124 ACGAAGATCTGCAT 31748111 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || || || || || ||| || |||||| ||||||||||||||| |||| Sbjct 31748760 GATTCCTTCTGGATATTATAATCGGCCAGGGTACGGCCATCTTCGAGCTGTTTGCCGGCG 31748701 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || |||||||| || || |||||| || | Sbjct 31748700 AAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTTACA 31748641 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||| ||||||| || | || || || || | |||||| Sbjct 31748640 TTATCGATGGTGTCAGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAAGTTTTG 31748581 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 31748580 ACGAAGATCTGCAT 31748567 >seq11 Length=95484752 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||| ||| || ||| || ||||||||||||||| |||| Sbjct 29434626 GACTCCTTCTGGATGTTGTAATCGGCCAAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCG 29434567 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| ||||| ||||| || || ||||| || || ||||| || | Sbjct 29434566 AAGATGAGACGTTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATTTTCGCCTTAACG 29434507 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| ||| ||||||| || | || || || ||||| || || Sbjct 29434506 TTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTA 29434447 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 29434446 ACGAAGATCTGCAT 29434433 >seq48 Length=1435396 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||||||||||||||||||||| | ||| || |||||| || || ||||||| | Sbjct 1250032 GACTCTTTTTGAATGTTGTAGTCAGCAAGGGTGCGACCATCTTCCAGTTGCTTACCGGCA 1249973 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 |||| || | |||||| || ||||| || ||||||||||| Sbjct 1249972 AAGATAAGCCTCTGTTGGTCAGGAGGGATCCCTTCTTTATC 1249932 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || |||||||||||||| | ||||| ||| || Sbjct 1229280 ACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCAAGTGTACGACCATCCTCT 1229221 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||||| ||||| | | |||| || | |||||||||||| || || ||||||||||| Sbjct 1229220 AGCTGCTTACCAGCAAAGATAAGCCTCTGTTGATCTGGTGGGATTCCTTCTTTATC 1229165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476556699509280