Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq22 174 2e-38 seq2 140 4e-28 seq4 138 2e-27 seq25 136 5e-27 seq16 129 8e-25 seq7 129 8e-25 seq19 116 5e-21 seq228 93.3 6e-14 >seq22 Length=61129363 Score = 174 bits (192), Expect = 2e-38 Identities = 561/869 (65%), Gaps = 4/869 (0%) Strand=Plus/Plus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 ||||| || || ||||| | ||||||||| ||||| ||||| |||| ||| ||||| | Sbjct 6287288 TTTTGATACTCTCCAACCCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 6287347 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| ||||||| || || |||| || | ||| | ||||| || | | Sbjct 6287348 TCCATCCAATCAAATGGGTTGACCACATTGTACATCTTTCCGTACCCTAACGCTCCCAGC 6287407 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 | | ||| || || || || ||||| |||| | || | ||||| || | | Sbjct 6287408 AGCCGATCCGCTACGAACTCGATGTACCGACTCATTAACTCGCCGTTCATCCCAACCAAC 6287467 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || ||||| || || ||||| | || ||||| || || || ||| |||| Sbjct 6287468 GCGCAGGGGAGAGCATCGCATACGAACTCCCTCTCTATGTCCACCGCGTCCCTTACTATC 6287527 Query 39566 GATGTTACTACCTCATCACTCGG--TGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 | || ||| |||||| | | || | | | || || ||||| |||| Sbjct 6287528 CCCCTCACGCGCTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCGA 6287585 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 | || || || || || ||||||| ||||| ||||| || || || | ||| |||| Sbjct 6287586 AATCGCAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGCA 6287645 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 ||| || | |||||| | ||||||||||||| ||| ||| || || ||||| |||| Sbjct 6287646 TTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCTT 6287705 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCT 39803 |||| ||||| || | | | || || || || | | ||||| ||| Sbjct 6287706 CTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTCA 6287765 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863 ||||| || ||||| || ||||| |||| || || || || || ||| | Sbjct 6287766 TAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGGT 6287825 Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923 |||||||| |||||| | || || || | | ||||| ||||| || || |||| Sbjct 6287826 TCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGGA 6287885 Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTG 39983 | ||||| || || || || || || |||||| | || || | || || |||||| Sbjct 6287886 TATTTTCGATAGCGATTTGGAAACCATAAAAAGCACGCGCCTCGGAGATCTGGACCTCTT 6287945 Query 39984 AACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCA 40043 || | | || | || ||| ||||| ||||| ||||| ||||| || | Sbjct 6287946 TCATGAACCGAACAGCAAGGTTCTCAAGGACTATGCCATCGGAGGCGGCGAAAAAGGCGA 6288005 Query 40044 ATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATCTT 40103 || || |||| || | | ||||||| || | | | ||||| | | |||| Sbjct 6288006 GAACGTGACTAATGAAGTGATGCTCATCGGCGGTGAGAGTTTCCCAGTGACGAAGATCTG 6288065 Query 40104 TTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTTCC 40163 || | ||| ||||| || || |||||||||||||| || || || |||||||| | || Sbjct 6288066 AAGACAGATCGACTTCCTCTGCGGTCCAAAACGACGCTTCGGCTTTCTTGTACATTTCCC 6288125 Query 40164 ATATATCACGATATTGTATTGGAAAAATA 40192 ||| || | ||||| || ||||| ||| Sbjct 6288126 ATACTTCTGGGTATTGGATCGGAAACATA 6288154 >seq2 Length=106994729 Score = 140 bits (154), Expect = 4e-28 Identities = 154/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 |||||| ||||| | |||| ||||| | ||| | || | |||||| || | ||| || Sbjct 29496030 TCCTCCTTGATCAACATATCGAGCAGTATCATTGAACACCCGCAGCATTGGGACAATTCC 29495971 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||||||| |||||||||||||| ||||||||| ||| | || |||||||| || ||| Sbjct 29495970 ATTAGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGA 29495911 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| |||||||| || ||| ||| | |||||| ||||| || |||||||| Sbjct 29495910 AACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATATAT 29495851 Query 69930 ACCCTCTATGCTATCATCTATCATG 69954 || || || ||||||||| ||||| Sbjct 29495850 TCCTTCAATACTATCATCTTTCATG 29495826 Score = 91.5 bits (100), Expect = 2e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 68734 AACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGA 68793 || ||||| ||| | |||||||| ||||||||| || | |||||||||| || ||| Sbjct 29498008 AAAACTCTGCGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAGA 29497949 Query 68794 ATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCAT 68851 || ||| |||||| ||||||||||||||||| | ||||| |||||| | |||| Sbjct 29497948 ATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT 29497891 >seq4 Length=78750349 Score = 138 bits (152), Expect = 2e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 ||||| ||||| | || | ||||||| ||| | || | |||||| || | ||| ||| Sbjct 13233814 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 13233755 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 |||||| |||||||||||||| ||| ||||| | | | || |||||||| || || Sbjct 13233754 TTAGATGTACCATTTGTTCCACGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 13233695 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| |||||||| || ||| ||||| |||||| ||||| ||||||||||| Sbjct 13233694 ACACCAATTCCTCCAGCTGATTTGCTGATTATAGCACACTCCTTCAAAGTGTCATATATT 13233635 Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971 ||||| || ||||||||| |||| || | ||| ||||| Sbjct 13233634 CCCTCGATACTATCATCTTTCATACACAGTAAAAAGCAGCT 13233594 Score = 95.1 bits (104), Expect = 2e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 68737 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATT 68796 ||||||||| | || ||||| ||||||||||| | | ||||||||||| ||||| Sbjct 13235774 ACTCTACGACTATAGATATTGGAAGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 13235715 Query 68797 TGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTT 68856 || |||||||||||||||||||||||| | ||| | |||||| | ||||| | Sbjct 13235714 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 13235655 Query 68857 ATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGAT 68893 || || ||| | ||| ||||| ||||| |||| Sbjct 13235654 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCACAGAT 13235618 >seq25 Length=50193149 Score = 136 bits (150), Expect = 5e-27 Identities = 153/205 (75%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 69750 TCCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACC 69809 |||||| ||||| | |||| ||||| | ||| | || | |||||| || | ||| || Sbjct 26656093 TCCTCCTTGATCAACATATCGAGCAGTATCATTGAACACCCGCAGCATTGGGACAATTCC 26656034 Query 69810 ATTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGA 69869 ||||||| |||||||||||||| ||||||||| ||| | || |||||||| || ||| Sbjct 26656033 ATTAGATGTACCATTTGTTCCACGAATATAACTACCTGTGGCTCGAATATTGTGAACAGA 26655974 Query 69870 TAGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATAT 69929 | ||| |||||||| || ||| ||| | |||||| ||||| || ||||| || Sbjct 26655973 AACACCAATTCCTCCAGCTGATTTGCTGATAACAGCACACTCCTTCAAAGTTTCATAAAT 26655914 Query 69930 ACCCTCTATGCTATCATCTATCATG 69954 || || || ||||||||| ||||| Sbjct 26655913 TCCTTCAATACTATCATCTTTCATG 26655889 Score = 96.9 bits (106), Expect = 5e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 68734 AACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGA 68793 || ||||||||| | |||||||| ||||||||| || | |||||||||| || ||| Sbjct 26658071 AAAACTCTACGACTATAAATATTGGAGGTATATGGCTCAAAGCATTCATTATTCCCAAGA 26658012 Query 68794 ATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCAT 68851 || ||| |||||| ||||||||||||||||| | ||||| |||||| | |||| Sbjct 26658011 ATCTGACTAGTTGAAGCAGTTGGCATAGGTGCTAACAATAGTGAATTTCTCACTCCAT 26657954 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 69990 AGTTCCCGCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATT 70049 ||| || ||||| || | || ||||| || |||||||||||| ||| ||| | || | Sbjct 26655750 AGTCCCAGCATTGAAAAGAGTGGGAGAAGCATGAGTGAACCATCTTTGAGACATCATGTG 26655691 Query 70050 GTATGTTTCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAA 70109 || |||| ||||| || || || || || ||||||||| | || || | ||| || Sbjct 26655690 ATAAGTTTTTATAGCAGAATCAATGTCATCCTTATGAATTCCAACAGCAACCCTCATTAA 26655631 Query 70110 CATATGCTGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAG 70169 ||| |||||||| | ||||| || | | |||||| || || || | ||||| Sbjct 26655630 CATGTGCTGAGGCCTTTCTATAACCTTCCCTTGAACTTTCAAGAGATAAGACCTCTCCAG 26655571 Query 70170 AGTTTTAAACCCAAAATAGTTGTATGAAAAGTC 70202 ||||| || ||||| || | ||| |||||| Sbjct 26655570 GGTTTTGAAGCCAAAGTAATCGTAGTCAAAGTC 26655538 >seq16 Length=102030775 Score = 129 bits (142), Expect = 8e-25 Identities = 409/632 (65%), Gaps = 4/632 (1%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 ||||| || || ||||| | ||||||||| ||||| ||||| |||| ||| ||||| | Sbjct 57862666 TTTTGATACTCTCCAACTCTTTTCTCGAAGAAATTGGTTTTCCCTTGCAACGATATCAGT 57862607 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| ||||||| || || | || || | ||| | ||||| || | | Sbjct 57862606 TCCATCCAATCAAATGGGTTGACCACGTTGTACATCTTTCCGTACCCTAACGCTCCCAAC 57862547 Query 39446 AATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGT 39505 || ||||| || || || || ||||| |||| | || | ||||| || | | Sbjct 57862546 AACCTATCCGCTACGAACTCGATGTACTGACTCATTAACTCGCCGTTCATCCCAACCAAC 57862487 Query 39506 TTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATTATC 39565 || ||||| || || ||||| | || ||||| || || || ||| |||| Sbjct 57862486 GCGCAGGGCAGAGCATCGCATACGAACTCCCTCTCTATGTCCACCGCGTCCCTTACTATC 57862427 Query 39566 GATGTTACTACCTCATCACTCGG--TGGATGCAATAAATGTTTAAACATTAAGCAGGCGA 39623 | | || || |||||| | | || | | | || || ||||| |||| Sbjct 57862426 CCTCTCACGCGTTCTTCACTCAGCTTTGACCGGAGGAGAGAGTA--CAGCAAGCAAGCGA 57862369 Query 39624 AGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCA 39683 | ||||| || || || ||||||| ||||| ||||| || || || | ||| |||| Sbjct 57862368 AATCACAGTGGAGACCTTCATCTCGTGAGATTAACTCGTTTGAGAAAGTTAATCCGGGCA 57862309 Query 39684 TTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTT 39743 ||| || | |||||| | ||||||||||||| ||| ||| || || ||||| || | Sbjct 57862308 TTAACCCCCTCTTTTTTAACCAAAATATGGCACAGAAACTTCCGGAGAAAAAGATCCCCT 57862249 Query 39744 CTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGTATCCACTTCT 39803 |||| ||||| || | | | || || || || | | ||||| ||| Sbjct 57862248 CTACGCAAGCAAAAGCGATTAACCGTTCGGCGAAAGTTTCTCCGCCGTCGATCCATTTCA 57862189 Query 39804 GTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATAAT 39863 ||||| || ||||| || ||||| |||| || || || || || ||| | Sbjct 57862188 TAGCCCACTCGGCTTTTTTAGCCACACACGGCACCGTCTCGATGGCGCGGAAAAGACGGT 57862129 Query 39864 GTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATGGA 39923 |||||||| |||||| | || || || | | ||||| ||||| || || |||| Sbjct 57862128 TCTTTTCATCGGAATCTTTTATGTAAGTCTCGAGAAGGAGACTGTACATCTCGGAGTGGA 57862069 Query 39924 TGTTTTCAATCGCCATCTGAAATCCGTAAAAA 39955 | ||||| || || || || || || |||||| Sbjct 57862068 TATTTTCGATAGCGATTTGGAAACCATAAAAA 57862037 >seq7 Length=42802127 Score = 129 bits (142), Expect = 8e-25 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 69751 CCTCCCTGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCA 69810 ||||| ||||| | || | ||||||| ||| | || | |||||| || | ||| ||| Sbjct 28741535 CCTCCTTGATCAACATAACGAGCAGTGTCATTGAACACCCGCAGCATTGGGACAATGCCA 28741476 Query 69811 TTAGATTTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGAT 69870 |||||| |||||||||||||| ||| ||||| | | | || |||||||| || || Sbjct 28741475 TTAGATGTACCATTTGTTCCACGAATGTAACTACTTGTAGCCCGAATATTGTGAACTGAG 28741416 Query 69871 AGACCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATA 69930 | ||| |||||||| || ||| ||| | |||||| ||||| ||||||||||| Sbjct 28741415 ACACCAATTCCTCCAGCTGATTTGCTGATAATAGCACACTCCTTCAAAGTGTCATATATT 28741356 Query 69931 CCCTCTATGCTATCATCTATCATGTTAAGAAGAAAACAGCT 69971 ||||| || || |||||| |||| || | ||| ||||| Sbjct 28741355 CCCTCAATACTGTCATCTTTCATACACAGTAAAAAGCAGCT 28741315 Score = 89.7 bits (98), Expect = 7e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 68737 ACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCCCAGAATT 68796 ||||||||| | || ||||| ||||||||||| | | ||||||||||| ||||| Sbjct 28743500 ACTCTACGACTATAGATATTGGATGTATATGGTTCAAAGCACTCATTATTTCCAAGAATC 28743441 Query 68797 TGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCATGTGTT 68856 || |||||||||||||||||||||||| | ||| | |||||| | ||||| | Sbjct 28743440 TGGCTAGTTGATGCAGTTGGCATAGGTGCTAACAAAAGTGAATTTCTCACTCCATGCTTA 28743381 Query 68857 ATGATTTTATCTTTTAGATGTTTCCAATCCCA 68888 || || ||| | ||| ||||| ||||| Sbjct 28743380 GCTATGTTGTCTCTAAGAGCATTCCAGTCCCA 28743349 >seq19 Length=70911690 Score = 116 bits (128), Expect = 5e-21 Identities = 247/369 (67%), Gaps = 0/369 (0%) Strand=Plus/Minus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| || ||||| ||||| || || ||||||| | || || ||||| || || || Sbjct 44463880 AAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTT 44463821 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 | ||||||||||| || |||||||| | ||||||||| ||| ||| || || || Sbjct 44463820 AATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGCACAGAAACTGCCGGAGAAA 44463761 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT 39793 || ||||||||||| || || || | | | || | || | | | Sbjct 44463760 AATATGCCTTCTACGCAAGCGAAAGCGATTAACCGTTCGGCAAAAGCTTCGCCGCCGTCG 44463701 Query 39794 ATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTA 39853 ||||| ||| |||||||| ||||| || || || |||| ||||| |||| | Sbjct 44463700 ATCCATTTCAAAGCCCAATCGGCTTTTTTAGCCACGCACGGCACCGTTTCAGTAGCGTGG 44463641 Query 39854 AAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATT 39913 ||||| | |||||| |||||||| ||| || || | | ||||||||||| Sbjct 44463640 AAGAGGCGGTTTTTTTCGGTGGAATCTTTAATATAAGTTTCGAGGAGGAGACTATACATC 44463581 Query 39914 TCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATT 39973 || || ||||| || || || || || || ||||| ||||| | || || | ||| Sbjct 44463580 TCAGAGTGGATATTCTCGATGGCGATTTGGAATCCATAAAATGCACGCGCCTCCGCGATT 44463521 Query 39974 TGTACCTCT 39982 || |||||| Sbjct 44463520 TGGACCTCT 44463512 >seq228 Length=356584 Score = 93.3 bits (102), Expect = 6e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 ||||| || ||||| ||||| || || ||||||| | || || ||||| || || || Sbjct 282327 AAGCAAGCAAAGTCGCAATGGAGACCTTCATCTCGAGAGATCAACTCGTTTGAGAAAGTT 282386 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA-AAAGATCCAGAAAA 39732 | ||||||||||| || |||||||| | ||||||||| || ||| ||| || || || Sbjct 282387 AATCCAGGCATTAACCCGCGCTTTTTTAACCAAAATATCGC-GCAGAAACTGCCGGAGAA 282445 Query 39733 GAAGATGCCTTCTAC 39747 || ||||||||||| Sbjct 282446 AAATATGCCTTCTAC 282460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686830251978720