Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 seq9 104 2e-17 seq168 98.7 8e-16 seq27 98.7 8e-16 seq23 98.7 8e-16 seq18 98.7 8e-16 seq13 98.7 8e-16 seq11 98.7 8e-16 seq5 98.7 8e-16 seq25 96.9 3e-15 seq247 95.1 1e-14 seq22 95.1 1e-14 seq1 93.3 4e-14 seq48 89.7 4e-13 >seq14 Length=44799946 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || ||||| || || || || ||| | | | || |||||||||||||||| || Sbjct 8848390 GTGGATTCTTTCTGGATGTTATAATCGGCAAGGGTCCGACCGTCTTCGAGCTGTTTGCCA 8848449 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| ||||||||||||| || || || || | || || || || ||||||| || Sbjct 8848450 GCGAAAATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTG 8848509 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | ||| || || || ||||| | ||||| || || ||| Sbjct 8848510 ACGTTGTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTT 8848569 Query 27231 TTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 8848570 TTCACAAAGATCTGCAT 8848586 >seq9 Length=117247901 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| ||||||||||||| || ||| Sbjct 28229335 GTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGCTGCTTCCCG 28229276 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || |||||||| || || || | ||||| || || ||||||| || Sbjct 28229275 GCGAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTG 28229216 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | || |||||| |||| ||||| | || ||||| || ||| Sbjct 28229215 ACGTTGTCGATTGTATCGGAGGATTCAACCTCTAAGGTTATGGTCTTCCCCGTTAGGGTT 28229156 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 28229155 TTGACGAAGATCTGCAT 28229139 >seq168 Length=529997 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || |||||||| || | || | || | || || || || || || ||||||||| | Sbjct 131373 CCGCCGCGCAAACGAAGGACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 131314 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || |||||||||| ||||| ||||| | |||||||| || || || || || Sbjct 131313 AAGGTACGGCCGTCTTCGAGTTGTTTTCCGGCAAAGATGAGACGTTGCTGGTCTGGGGGG 131254 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| ||| | | | || | ||||| | | || || Sbjct 131253 ATGCCTTCCTTGTCTTGGATCTTCGCTTTAACGTTGTCGATCGTGTCGGAGCTCTCGACC 131194 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | ||||| |||| |||||||| ||||||||||| Sbjct 131193 TCGAGAGTGATTGTCTTGCCAGTCAAGGTTTTCACGAAGATTTGCAT 131147 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || ||||| || ||||| ||| || | | || |||||||||||||||| ||| Sbjct 131115 GTTGACTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGTTTTCCG 131056 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || |||||||| || || || || | || || ||||| ||| ||| ||| Sbjct 131055 GCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTC 130996 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | | || || || ||||| || | ||||| || ||||| Sbjct 130995 ACGTTGTCGATCGTATCGGAGCTCTCGACCTCGAGAGTGATCGTCTTGCCGGTTAGAGTC 130936 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 130935 TTAACGAAGATCTGCAT 130919 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG-CTCATGTTGCGCTCGTCTTC 27097 |||| ||| | || || || || || |||||||| ||| || | || ||| |||| || Sbjct 131583 ACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCTAAAGTC-CGCCCGTCCTC 131525 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||| || || |||||| | |||||||| || || || ||||| | || || || || Sbjct 131524 GAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTG 131465 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| ||| ||||| | | || | ||||| | | || || || ||||| || | || Sbjct 131464 GATTTTGGCTTTCACGTTGTCGATCGTGTCAGAGCTCTCGACCTCGAGAGTGATCGTCTT 131405 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || || ||||||||||| Sbjct 131404 TCCGGTAAGCGTCTTAACGAAGATTTGCAT 131375 >seq27 Length=3408634 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || ||||| || | || | ||| | ||| || || || || || ||||||||| | Sbjct 2140295 CCGCCACGCAAACGAAGGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCGGCC 2140236 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | || ||||||| || ||||| |||||| | |||||||| || || || || || Sbjct 2140235 AAGGTACGGCCGTCTTCAAGTTGTTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGG 2140176 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| || | | | || | ||||| | | || || Sbjct 2140175 ATGCCTTCCTTGTCTTGGATCTTCGCCTTAACGTTGTCGATCGTGTCGGAGCTCTCGACC 2140116 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | ||||| |||| |||||||| ||||||||||| Sbjct 2140115 TCGAGAGTGATTGTCTTGCCGGTCAAGGTTTTCACGAAGATTTGCAT 2140069 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCG-CTCATGTTGCGCTCGTCTTC 27097 |||| ||| | || || || || || |||||||| ||| || | || ||| |||| || Sbjct 2140505 ACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCTAAAGTC-CGCCCGTCCTC 2140447 Query 27098 GAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGC 27157 ||| || || |||||| | |||||||| || || || ||||| | || || || || Sbjct 2140446 GAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTG 2140387 Query 27158 GATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTT 27217 ||| ||| ||||| | | || | ||||| | | || || || ||||| || | || Sbjct 2140386 GATTTTGGCTTTCACGTTGTCGATCGTGTCAGAGCTCTCGACCTCGAGAGTGATCGTCTT 2140327 Query 27218 GCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 ||||| || || || || ||||||||||| Sbjct 2140326 TCCCGTAAGCGTCTTAACGAAGATTTGCAT 2140297 >seq23 Length=61753794 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGT-TGCGCTC 27091 ||||| |||||||| | || || || |||||||| || ||||| | || | | | | | Sbjct 11031258 CGCAAAACCAAATGCAGGGTCGACTCCTTTTGAATGTTATAGTC-CGCAAGAGTCCTCCC 11031200 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 ||| |||||||| || ||||| |||| | | |||||| || || || | |||||| || Sbjct 11031199 GTCCTCGAGCTGCTTTCCGGCAAAAATCAACCTCTGTTGGTCAGGTGGGATACCCTCCTT 11031140 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 ||| ||||||| || | | || || ||||| | | || || || | || || Sbjct 11031139 ATCTTGGATCTTGGCCTTAACATTATCAACCGTGTCGGAGCTCTCCACCTCCAACGTAAT 11031080 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | ||| || |||| |||||||||||| || ||||| Sbjct 11031079 GGTTTTACCGGTCAAAGTTTTCACAAATATCTGCAT 11031044 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| ||||||||||| |||||||| | | |||| | ||||| || || |||||| Sbjct 11030328 GTAGACTCTTTTTGAATGTTGTAGTCAGCAAGGGTGCGACCATCTTCCAGTTGCTTACCG 11030269 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | ||||||||| || || | || || ||||| |||||| || Sbjct 11030268 GCAAAGATAAGCCTCTGTTGATCAGGAGGGATCCCTTCCTTATCCTGGATCTTAGCCTTG 11030209 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | |||||| || || || || | ||||| || || ||| Sbjct 11030208 ACATTATCAATTGTGTCGGAGCTTTCAACCTCAAGGGTGATTGTCTTGCCAGTGAGGGTT 11030149 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||| ||||| Sbjct 11030148 TTCACGAAGATCTGCAT 11030132 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||||| ||||| || | ||||| || ||||| |||||||||||| | Sbjct 39553757 CCACCACGCAGCCGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCC 39553816 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||||||||| || || || | ||||| | || || || || || Sbjct 39553817 AATGTCCTACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGG 39553876 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || |||||| |||| | || | || || | |||||| Sbjct 39553877 ATACCCTCCTTGTCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACC 39553936 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| || | || || || ||||| || |||||||| |||||| Sbjct 39553937 TCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCATA 39553984 >seq18 Length=57801308 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || | || |||||||||||| | || || || || || || ||||| ||| | Sbjct 49488913 CCACCACGAAGCCTCAATACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGCC 49488854 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| |||| ||||| ||||| ||||| | ||||| | || || || || || Sbjct 49488853 AAGGTGCGACCGTCCTCGAGTTGTTTCCCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 49488794 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || ||||||| || | | | || | ||||| | | ||| ||| Sbjct 49488793 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACT 49488734 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | |||||| | ||||| ||||| || || || ||||| ||||| Sbjct 49488733 TCCAAAGTTATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 49488687 >seq13 Length=56485995 Score = 98.7 bits (108), Expect = 8e-16 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 27091 CGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTT 27150 |||||||||||||||| || ||| ||||||||||||| || || || || | || || | Sbjct 54270704 CGTCTTCGAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCT 54270645 Query 27151 TATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTA 27210 | || ||||||| || | | | || | ||||| | | ||| || || || |||| Sbjct 54270644 TGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTA 54270585 Query 27211 TAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 | | ||||| || || |||||||||||||| ||||| Sbjct 54270584 TGGTCTTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 54270548 >seq11 Length=95484752 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || || | || |||||||||||| | || || || || || || ||||| ||| | Sbjct 29434887 CCACCACGAAGCCTCAATACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGCC 29434828 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| |||| ||||| ||||| ||||| | ||||| | || || || || || Sbjct 29434827 AAGGTGCGACCGTCCTCGAGTTGTTTCCCGGCAAATATGAGCCTTTGCTGGTCTGGTGGG 29434768 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | || || || || |||||| || | | | || | ||||| | | ||| ||| Sbjct 29434767 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACT 29434708 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | |||||| | ||||| ||||| ||||| || ||||| ||||| Sbjct 29434707 TCCAAAGTTATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 29434661 >seq5 Length=56898656 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| |||| |||||||| || ||| Sbjct 37776811 GTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCCTCGAGCTGCTTGCCG 37776870 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||| |||||||| || || || | || || || || ||||||| ||| Sbjct 37776871 GCAAAGATGAGGCGCTGTTGGTCGGGTGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTG 37776930 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | ||||| ||||| ||||| | || ||||| || ||| Sbjct 37776931 ACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTCTTCCCCGTTAGGGTT 37776990 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||||||||| Sbjct 37776991 TTGACGAAGATTTGCAT 37777007 >seq25 Length=50193149 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || || |||| |||||| |||||||| | ||||| || ||||| |||||||||||| | Sbjct 28160717 CCACCACGCAGCCGCAACACCAAATGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCC 28160658 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | | | ||||||||||| || || || | ||||| | || || || || || Sbjct 28160657 AATGTCCTACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGG 28160598 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || |||||| |||| | || | || || | |||||| Sbjct 28160597 ATACCCTCCTTGTCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACC 28160538 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || | ||| || | || || || ||||| || |||||||| |||||| Sbjct 28160537 TCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCATA 28160490 >seq247 Length=340100 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || |||||||||||| | | |||| ||||||| ||||| || ||| Sbjct 82687 GTGGATTCCTTCTGGATATTGTAGTCGGCTAAGGTGCGGCCGTCTTCAAGCTGCTTCCCG 82628 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || || |||||||| || || | || || || || ||||||| ||| Sbjct 82627 GCGAAGATAAGGCGTTGTTGATCTGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTG 82568 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || || || || ||||| | ||| ||||| || ||| Sbjct 82567 ACATTGTCGATGGTGTCGGAAGACTCGACCTCAAGGGTTATGGTTTTCCCCGTTAGGGTT 82508 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 82507 TTGACGAAGATCTGCAT 82491 >seq22 Length=61129363 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || |||||||||||| | | |||| ||||||| ||||| || ||| Sbjct 61004847 GTGGATTCCTTCTGGATATTGTAGTCGGCTAAGGTGCGGCCGTCTTCAAGCTGCTTCCCG 61004788 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || || |||||||| || || | || || || || ||||||| ||| Sbjct 61004787 GCGAAGATAAGGCGTTGTTGATCGGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTG 61004728 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || || || || ||||| | ||| ||||| || ||| Sbjct 61004727 ACATTGTCGATGGTGTCAGAAGACTCGACCTCAAGGGTTATGGTTTTCCCCGTTAGGGTT 61004668 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 61004667 TTGACGAAGATCTGCAT 61004651 >seq1 Length=92291805 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | ||||| |||||||| | || || || ||||| || || || || | | Sbjct 4396886 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATC-CGC 4396944 Query 27081 ATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || | | | | || |||||||| || || || |||| | | ||| || || || || Sbjct 4396945 AAGTGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGG 4397004 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| ||||| ||||||| |||| | || | ||||||| | || || Sbjct 4397005 GATACCCTCCTTATCTTGGATCTTGGCCTTCACATTATCAATTGTGTCTGAGCTCTCCAC 4397064 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || |||| ||| || |||| |||||||||||| || ||||| Sbjct 4397065 CTCCAATGTGATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCAT 4397112 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 ||||| || | ||||| |||||||| | || || || ||||| || || || || | | Sbjct 4402501 CCTCCTCGAAGTCGCAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAATC-CGC 4402559 Query 27081 ATGT-TGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | || | | | | || |||||||| || || || |||| | | ||| || || || || Sbjct 4402560 AAGTGTCCTCCCATCCTCGAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGG 4402619 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| ||||| ||||||| |||| | || | ||||||| | || || Sbjct 4402620 GATACCCTCCTTATCTTGGATCTTGGCCTTCACATTATCAATTGTGTCTGAGCTCTCCAC 4402679 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || | || |||| ||| || |||| |||||||||||| || ||||| Sbjct 4402680 CTCCAATGTGATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCAT 4402727 >seq48 Length=1435396 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| ||||||||||| |||||||| | | |||| | ||||| || || |||||| Sbjct 1250035 GTAGACTCTTTTTGAATGTTGTAGTCAGCAAGGGTGCGACCATCTTCCAGTTGCTTACCG 1249976 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || | |||||| || || || | || |||||||| |||||| || Sbjct 1249975 GCAAAGATAAGCCTCTGTTGGTCAGGAGGGATCCCTTCTTTATCCTGGATCTTAGCCTTG 1249916 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | |||||| || || || || | ||||| || || ||| Sbjct 1249915 ACATTATCAATTGTGTCAGAGCTTTCAACCTCAAGGGTGATTGTCTTGCCAGTAAGGGTT 1249856 Query 27231 TTCACAAAGATTTGCAT 27247 || || ||||| ||||| Sbjct 1249855 TTTACGAAGATCTGCAT 1249839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424887023532576