Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20hirsutum_20[refseq_20GCF_5F000987745.1_202015-05-05] 9,148 sequences; 2,189,140,010 total letters Query= NC_030948.1 Length=167619 Score E Sequences producing significant alignments: (Bits) Value seq564 82.4 8e-11 >seq564 Length=137050 Score = 82.4 bits (90), Expect = 8e-11 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 87081 TGGTGAGGGCGGAGGGAATCGAACCCTCAACCTACGGATTAAAAGTCCGTTGCTCTAACC 87140 ||||||| ||| |||| |||||||| |||||| |||||||||||||||||||| ||| Sbjct 108303 TGGTGAGCGCGCTGGGACTCGAACCCAGGACCTACAGATTAAAAGTCCGTTGCTCT-ACC 108361 Query 87141 AATTGAGCTACACCCTC 87157 || |||||||| | ||| Sbjct 108362 AACTGAGCTACGCGCTC 108378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536191479492320