Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq6 120 5e-22 seq2 118 2e-21 seq13 109 8e-19 seq9 109 8e-19 seq11 102 1e-16 seq3 100 4e-16 >seq6 Length=51074515 Score = 120 bits (132), Expect = 5e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| | || |||||||| || || | ||| ||||| Sbjct 42745430 ATGCAGATTTTTGTCAAGACTTTGACCGGCAAAACAATCACCTTGGAGGTTGAAAGCTCC 42745489 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| |||| || || ||||| ||||| ||||| || ||||||||||| Sbjct 42745490 GATACCATTGACAATGTTAAGGCA-AAGATTCAGGATAAGGAAGGAATCCCACCTGATCA 42745548 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||| || ||||| || |||||||| || ||| | | || || | |||||||| Sbjct 42745549 GCAAAGGCTCATCTTTGCCGGCAAACAATTGGAAGATGGGAGGACTTTGGCTGATTATAA 42745608 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||| ||||| || || | || | ||| | ||| | || ||||| Sbjct 42745609 CATTCAGAAAGAGTCTACCCTTCACCTTGTTCTTCGTCTCCGTGGTGG 42745656 >seq2 Length=62769430 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || || || || || | ||| | || Sbjct 27609460 ATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACAATCACCTTGGAGGTCGAGAGTTCG 27609519 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| ||| |||| | ||| || ||||| || |||||||| || ||||| || ||| Sbjct 27609520 GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAAGAAGGAATCCCACCAGACCAA 27609579 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||| | |||||||| ||||||||| | || ||| | |||| | | ||||||||| Sbjct 27609580 CAAAGATTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGAACTCTTGCCGATTATAAT 27609639 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || || || || ||| | ||||||||| | || | || |||||||| Sbjct 27609640 ATCCAGAAGGAGTCTACTCTCCATTTGGTTCTCCGCCTTCGGGGTGGTAT 27609689 Score = 118 bits (130), Expect = 2e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| || || || || ||||| ||| ||||| ||||| Sbjct 27609916 ATGCAGATCTTTGTTAAGACTCTTACTGGAAAGACTATCACTCTAGAGGTTGAAAGTTCA 27609975 Query 124599 GATACAATTTCTAAT-TTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| |||| || || |||||||| || ||||| || ||||| || || Sbjct 27609976 GACACCATTGACAATGTTAAGGCA-AAGATTCAAGACAAGGAAGGGATCCCACCAGACCA 27610034 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||||| || ||||| || || ||| | || ||| | | ||||| | |||||||| Sbjct 27610035 GCAAAGGCTCATATTTGCTGGCAAGCAACTTGAAGATGGCAGGACATTGGCTGATTATAA 27610094 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766 ||| ||||| || || ||| ||||| | || | || | || |||||| Sbjct 27610095 TATCCAAAAGGAGTCTACTCTGCATCTTGTCCTTCGCCTTCGCGGTGGT 27610143 Score = 113 bits (124), Expect = 7e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| || | ||||| || || ||||| || || || | ||| | ||| Sbjct 10549165 ATGCAAATTTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTGGAAAGCTCC 10549224 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || || |||| | || || || |||||||||||||| || ||||| |||||| Sbjct 10549225 GACACCATCGATAATGTCAAGGCCAAGATCCAAGATAAAGAAGGAATCCCACCAGATCAA 10549284 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||| ||||| || || || |||||||| |||| ||| | | || || || Sbjct 10549285 CAGAGGCTTATCTTTGCTGGTAAGCAGCTAGAGGATGGTCGTACACTTGCTGACTACAAC 10549344 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| || || || || | || ||||| | ||||| | |||||||| Sbjct 10549345 ATTCAGAAGGAGTCCACCCTCCACTTGGTCCTTCGTTTGAGGGGTGGTAT 10549394 Score = 104 bits (114), Expect = 4e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || |||| || || || ||||| || || || | ||| ||||| | Sbjct 10571434 ATGCAGATCTTCGTAAAAACCCTTACTGGCAAGACAATCACCCTTGAGGTTGAAAGCTCT 10571493 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| |||| | || || || || ||||||||||| || || ||||| ||| Sbjct 10571494 GACACAATTGATAATGTCAAGGCTAAGATCCAGGATAAAGAAGGGATCCCCCCTGACCAA 10571553 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||| ||||| || || ||| | || ||| |||| || | | || || || Sbjct 10571554 CAGAGGCTTATCTTTGCCGGTAAGCAACTTGAAGATGGTCGCACCCTTGCTGACTACAAC 10571613 Query 124719 ATTCAAAAAGAATCAAC 124735 ||||||||||| || || Sbjct 10571614 ATTCAAAAAGAGTCTAC 10571630 Score = 98.7 bits (108), Expect = 2e-15 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 |||||||||||| | ||||| || || || || || || ||| | ||| |||| || | Sbjct 10549849 ATGCAAATATTTGTGAAGACTCTTACCGGAAAGACCATTACTTTGGAGGTTGAGAGTTCA 10549908 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | || || || || || || || ||||| || || || || Sbjct 10549909 -GATACCATTGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCA 10549967 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 ||| ||| | || ||||| || || ||| | || ||| | || || | | ||||| || Sbjct 10549968 ACAGAGGTTGATCTTTGCCGGTAAGCAACTTGAAGATGGCCGCACTCTCGCTGATTACAA 10550027 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| || | |||||||| | ||| | || |||||||| Sbjct 10550028 CATCCAAAAGGAATCCACCCTCCATTTGGTGCTTCGTCTTCGTGGTGGTAT 10550078 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||||||| | || || || || ||||| || || || | || | ||| Sbjct 10571662 ATGCAAATATTTGTCAAAACCCTTACTGGCAAGACAATCACCCTTGAAGTGGAAAGCTCC 10571721 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| |||| | || || || ||||| ||||||||||| || ||||| ||| Sbjct 10571722 GACACAATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAAGGTATCCCTCCTGACCAA 10571781 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || |||||||| ||||| || |||||| | |||||| | || || | | || || || Sbjct 10571782 CAGAGGCTTATCTTTGCTGGTAAACAACTGGAGGATGGCCGCACCCTTGCTGACTACAAC 10571841 Query 124719 ATTCAAAAAGAATCAAC 124735 || || ||||| || || Sbjct 10571842 ATCCAGAAAGAGTCTAC 10571858 >seq13 Length=58321163 Score = 109 bits (120), Expect = 8e-19 Identities = 169/239 (71%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || ||| | |||||||| || || || || || || | || |||| ||| Sbjct 44437176 ATGCAGATTTTTGTGAAGACACTTACCGGGAAGACCATCACCCTGGAAGTTGAGAGCTC- 44437118 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||| ||||| |||| | || |||||||||||||| |||||||| || || || || Sbjct 44437117 TGACACAATCGATAATGTTAAGGCCAAAATTCAAGATAAGGAAGGTATCCCTCCAGACCA 44437058 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||||| || ||||| ||||| || |||||||| | | || | | |||||| || Sbjct 44437057 GCAGAGGCTGATATTTGCTGGAAAGCAGCTAGAGGATGGGAGGACCCTTGCAGATTACAA 44436998 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776 || || || || || || | || |||||| | ||| | || ||||| || ||| || Sbjct 44436997 CATCCAGAAGGAGTCCACCCTCCACTTGGTTCTCCGTCTCCGTGGTGGGATGCAAATTT 44436939 >seq9 Length=70713020 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | ||||| || || || || ||||| ||| | || |||| | Sbjct 66881809 ATGCAAATTTTTGTGAAGACTCTCACCGGAAAGACTATTACTTTGGAAGTTGAGAGTTCT 66881750 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| ||||| || || || || || ||||| || ||||| ||||| Sbjct 66881749 GACACCATTGACAATGTAAAAGCTAAGATCCAGGACAAGGAAGGGATTCCACCAGATCAG 66881690 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || ||| | |||||||| || ||||| | || ||| || | ||| | | |||||||||| Sbjct 66881689 CAGAGGTTGATTTTTGCTGGCAAACAGCTCGAAGATGGTAGGACACTTGCAGATTATAAT 66881630 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || ||||| || || | || ||||| | || | ||||| || || Sbjct 66881629 ATCCAGAAAGAGTCTACCCTCCACTTGGTGCTCCGACTTCGAGGAGGGAT 66881580 Score = 109 bits (120), Expect = 8e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | || || || || || || || || || | ||| | ||| | Sbjct 66882721 ATGCAGATCTTTGTGAAAACCCTTACTGGTAAGACCATCACCCTTGAGGTAGAAAGTTCT 66882662 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || |||| | || ||||| ||||| |||||||| || || ||||| || Sbjct 66882661 GATACTATCGATAATGTCAAGGCTAAAATCCAAGACAAAGAAGGGATCCCTCCTGACCAG 66882602 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||| ||||| ||||||||| | |||||| | ||||| | | || || ||| Sbjct 66882601 CAAAGGCTTATCTTTGCCGGAAAACAACTCGAGGATGGCCGAACTCTTGCCGACTACAAT 66882542 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | ||| | || | ||| || | ||||| || Sbjct 66882541 ATCCAAAAGGAGTCCACCCTCCATCTAGTCCTTCGTCTAAGGGGTGGCAT 66882492 Score = 107 bits (118), Expect = 3e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| ||||| | ||||| | || || ||||| || || | ||| | || ||| Sbjct 66881581 ATGCAGATATTCGTGAAGACCTTGACCGGTAAAACCATCACCCTGGAGGTCGAGAGCTCG 66881522 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | ||| ||||||||| || || || || || || || || || Sbjct 66881521 -GACACCATTGACAATGTCAAAGCGAAAATTCAGGACAAGGAGGGGATTCCTCCAGACCA 66881463 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | |||||||| ||||| || | |||||| | | ||| | | ||| ||||| Sbjct 66881462 GCAGAGGTTGATTTTTGCCGGAAAGCAGCTTGAGGATGGGAGGACACTTGCAGACTATAA 66881403 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| ||||| || |||||||||||||||| | ||||| || || Sbjct 66881402 CATCCAAAAGGAATCGACCCTGCATTTGGTTTTACGACTTCGAGGAGGGAT 66881352 Score = 100 bits (110), Expect = 4e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || || || || || | ||| | ||| Sbjct 66888875 ATGCAAATCTTTGTGAAAACCCTTACTGGTAAGACCATCACCCTTGAGGTAGAAAGCTCC 66888816 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||||| || |||| | || ||||| ||||| |||||||| || || || || ||| Sbjct 66888815 GATACTATCGATAATGTCAAGGCCAAAATCCAAGACAAAGAAGGGATTCCTCCAGACCAA 66888756 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||||||||||| ||||| ||||||||| | |||||| | ||||| | | || || || Sbjct 66888755 CAAAGGCTTATCTTTGCCGGAAAACAACTTGAGGATGGCCGAACTCTTGCCGACTACAAC 66888696 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || ||||| || || || | || | || | ||| || | ||||| || Sbjct 66888695 ATCCAAAAGGAGTCCACCCTCCACCTAGTCCTTCGTCTAAGGGGTGGCAT 66888646 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| ||||| | ||||| | || || ||||| ||||| | ||| | || ||| Sbjct 66887963 ATGCAGATATTCGTTAAGACCTTGACTGGTAAAACCATAACACTGGAGGTCGAGAGCTCG 66887904 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 || || ||| ||| | ||| ||||||||| || || || || || || || || || Sbjct 66887903 -GACACCATTGACAATGTTAAAGCGAAAATTCAGGACAAGGAGGGGATTCCTCCAGACCA 66887845 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 || ||| | |||||||| ||||| || | |||||| | | || | | || ||||| Sbjct 66887844 GCAGAGGTTGATTTTTGCCGGAAAGCAGCTTGAGGATGGGAGGACGCTTGCGGACTATAA 66887785 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACG 124753 || ||||| ||||| ||| ||||||||||||| || Sbjct 66887784 CATCCAAAAGGAATCCACTCTGCATTTGGTTTTGCG 66887749 >seq11 Length=62681010 Score = 102 bits (112), Expect = 1e-16 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AGCAAA 124597 ||||| || || | ||||| | || || || || || ||| |||| | || ||| Sbjct 1163451 ATGCAGATCTTCGTCAAGACTTTGACCGGTAAGACGATTACTTTAGAAGTGGAGAGCTCG 1163392 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 ||||| ||| ||| | ||| ||| ||||| || |||||||| || ||||| ||||| Sbjct 1163391 -GATACGATTGATAACGTGAAAGCGAAGATTCAGGACAAAGAAGGAATTCCACCAGATCA 1163333 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | |||||||| || ||||| | || ||| | | || || | ||||| || Sbjct 1163332 GCAAAGGTTGATTTTTGCTGGGAAACAGCTGGAAGATGGAAGGACTTTGGCTGATTACAA 1163273 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGG 124765 ||||||||| || || ||| | || | ||| | ||| | || ||||| Sbjct 1163272 TATTCAAAAGGAGTCCACTCTTCACCTTGTTCTTCGTCTTCGTGGTGG 1163225 >seq3 Length=45765648 Score = 100 bits (110), Expect = 4e-16 Identities = 155/219 (71%), Gaps = 12/219 (5%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGA-AG--CA 124595 || ||||||||| | |||| | || || ||||| || || | || |||| || || Sbjct 27760252 ATCCAAATATTTGTCCAGACCTTTACTGGAAAAACAATTACATTGGAAGTTGAGAGTTCA 27760311 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTG-- 124653 ||| || ||| || | | ||| | |||||||| || ||||| ||||| | ||| Sbjct 27760312 AAT---ACTATTGATATTGTGAAAGACAAAATTCAGGAAAAAGAGGGTATCTCCCCTTGC 27760368 Query 124654 ----ATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAA 124709 | || ||||| | |||||||||||| ||||| | |||||| | | || | Sbjct 27760369 CCAAACCAGCAAAGATTAATTTTTGCAGGAGAACAACTTGAGGATGGAAGGACTCTTACT 27760428 Query 124710 GATTATAATATTCAAAAAGAATCAACTTTGCATTTGGTT 124748 |||||||||||||||||||| |||||| | ||||||||| Sbjct 27760429 GATTATAATATTCAAAAAGAGTCAACTCTTCATTTGGTT 27760467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755446235731200