Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq13 125 6e-24 seq2 111 1e-19 seq9 104 2e-17 seq10 95.1 1e-14 seq11 93.3 3e-14 seq6 87.8 1e-12 >seq13 Length=58321163 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| || || ||||| ||| || | || ||| Sbjct 44437196 ACCAAGTGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCCAGGGTACGGCCATCCTCC 44437255 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || || || || |||| || ||||||||| || || | |||||||||||| | Sbjct 44437256 AGTTGCTTACCAGCAAAAATCAGCCTCTGTTGGTCTGGGGGGATTCCCTCCTTGTCCTGA 44437315 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 |||||| |||||| | | | | || || ||| ||||||| ||||| ||||| Sbjct 44437316 ATTTTTGCCTTAACATTGTCAATGGTATCTGAACTCTCTACCTCCAATGTAATGGTCTTC 44437375 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| |||||| ||||| |||||||| Sbjct 44437376 CCAGTCAAAGTCTTAACAAAAATTTGCAT 44437404 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||| || || | ||| | || || Sbjct 44437424 ACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCCAATGTGCGGCCATCCTCA 44437483 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || || ||||| |||| || || ||||| || || | || ||||||||| | Sbjct 44437484 AGTTGCTTACCAGCGAAGATCAGCCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTCCTGA 44437543 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | || || ||||||||||| || || ||||| Sbjct 44437544 ATCTTGGCCTTGACATTGTCAATCGTATCAGAACTCTCCACCTCCAATGTGATGGTCTTT 44437603 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| ||||| |||||||| Sbjct 44437604 CCGGTGAGGGTCTTGACAAAAATTTGCAT 44437632 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||||||||| |||||||| || || | | || || Sbjct 44436968 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTCCTCCCATCCTCT 44437027 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || ||||| || ||||||| || ||| ||||| ||||| | ||| ||||| || | Sbjct 44437028 AGCTGCTTTCCAGCAAATATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTATCTTGA 44437087 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| |||||| | | |||| | ||| || |||| ||| || ||||| Sbjct 44437088 ATTTTGGCCTTAACATTATCGATTGTGTCAGAGCTCTCAACTTCCAGGGTGATGGTCTTC 44437147 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||||||||| || ||||| Sbjct 44437148 CCGGTAAGTGTCTTCACAAAAATCTGCAT 44437176 >seq2 Length=62769430 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||| || |||||||| || || ||| | || || Sbjct 10550057 ACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGCGAGAGTGCGGCCATCTTCA 10549998 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || ||||| || ||||||| ||||||||| || || | ||||||||||||| Sbjct 10549997 AGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGG 10549938 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | || || ||| ||||||| ||||| ||||| Sbjct 10549937 ATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAATGGTCTTT 10549878 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||||||||| |||||||| Sbjct 10549877 CCGGTAAGAGTCTTCACAAATATTTGCAT 10549849 Score = 102 bits (112), Expect = 6e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| ||||| || ||||||||||| ||| ||| | || || Sbjct 10549829 ACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCTTCT 10549770 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||| || || || || ||||||| ||| ||||| || || | ||||||||||||| Sbjct 10549769 AATTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGG 10549710 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | || || ||| ||||||| ||||| ||||| Sbjct 10549709 ATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTT 10549650 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||||| |||||||||||||| Sbjct 10549649 CCGGTCAAGGTCTTAACAAAGATTTGCAT 10549621 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || |||||| |||||||||||||| ||| | | || || Sbjct 10550285 ACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCAAGTGTCCTGCCATCCTCA 10550226 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| ||||||| ||||||||| ||||| | ||| ||||||||| Sbjct 10550225 AGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTTGTCCTGG 10550166 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | |||| | ||| || |||| ||| || || || Sbjct 10550165 ATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACTTCCAAGGTGATGGTTTTC 10550106 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||||||||||||| || ||||| Sbjct 10550105 CCGGTAAGAGTCTTCACAAAAATCTGCAT 10550077 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/211 (72%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--TTCAGTTGGCGATCGTCGTC 45186 |||| ||||| || ||||||||| || |||||||| | |||| ||| |||| || Sbjct 10572325 CAAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCAGCTAGAGTT--CGACCGTCCTC 10572268 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || || || || || ||||||| ||| || || || || | |||||||||||| Sbjct 10572267 CAACTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTG 10572208 Query 45247 AATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 || | ||||||| | | || | | || || ||| || |||| |||||| |||| Sbjct 10572207 AA-TCTTTGCTTTTACATTGTCAATCGTATCAGAACTCTCAACTTCCAAGGTAATAGTCT 10572149 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || || ||||||||||| |||||||| Sbjct 10572148 TTCCTGTGAGGGTCTTCACAAAAATTTGCAT 10572118 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| || |||||||||||||||||| || ||| | || || Sbjct 27609212 ACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAGTCGGCTAGCGTGCGGCCATCCTCA 27609153 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 |||||||| || || ||||| | || ||| || || || || | || ||||| || Sbjct 27609152 AGTTGTTTGCCAGCAAATATAAGCCTCTGCTGATCCGGTGGGATCCCTTCCTTATCTTGG 27609093 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | |||| || ||||||||| | ||| || |||||| Sbjct 27609092 ATCTTAGCCTTCACATTATCAATGGTGTCTGAACTCTCCACCTCGAGGGTGATGGTCTTG 27609033 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || || || |||||||||||||| Sbjct 27609032 CCAGTGAGGGTTTTAACAAAGATTTGCAT 27609004 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||||||| || || || ||| || | | || || Sbjct 27609668 ACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCAAGAGTTCTTCCATCTTCA 27609609 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||||||||| || || ||||| | |||||||| || || | || || |||||| | Sbjct 27609608 AGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTCCTGA 27609549 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | | | ||| || ||| ||||||| ||| || ||||| Sbjct 27609548 ATCTTGGCTTTCACATTATCAATGGTATCCGAACTCTCGACCTCCAAGGTGATTGTCTTT 27609489 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || ||||| || ||||||||||||||| Sbjct 27609488 CCAGTGAGAGTTTTGACAAAGATTTGCATG 27609459 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || ||| |||||| || |||||||| || ||| || | || || Sbjct 10549601 ACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCCAGGGTACGGCCATCTTCT 10549542 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| || ||||| || || | | ||| ||||| ||||| | || || ||||| Sbjct 10549541 AGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGGATCCCTTCTTTGTCTTGG 10549482 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | ||||| | |||||||| | ||| || |||||| Sbjct 10549481 ATCTTGGCCTTGACATTATCAATGGTGTCCGAGCTTTCCACCTCGAGGGTGATAGTCTTG 10549422 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || || ||||| |||||||||||||| Sbjct 10549421 CCGGTGAGGGTCTTAACAAAGATTTGCAT 10549393 >seq9 Length=70713020 Score = 104 bits (114), Expect = 2e-17 Identities = 153/211 (73%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--TTCAGTTGGCGATCGTCGTC 45186 |||| ||||| ||| ||||||||| || |||||||| | |||| ||| | || || Sbjct 66887528 CAAGATGCAGAGTGGACTCCTTCTGGATATTGTAGTCTGCTAAAGTT--CGACCATCCTC 66887585 Query 45187 CAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGC 45246 || || || || || || ||||||| ||| ||||| ||||| | |||||||||||| Sbjct 66887586 CAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTG 66887645 Query 45247 AATTTTTTGCTTAACCGCCGCCACGC-TGTCCCCACCCTCCACCTCCACGGTAATCGTCT 45305 || | || |||| | | || | ||||| | ||||||||||| ||| || || | Sbjct 66887646 AA-TCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGATGGTTT 66887704 Query 45306 TGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || |||| ||||||||| || || ||||| Sbjct 66887705 TCCCAGTCAAAGTCTTCACGAATATCTGCAT 66887735 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 || |||| | || ||| ||||| ||||| || ||||| || ||||| ||||| Sbjct 66881355 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 66881414 Query 45170 AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGC 45229 ||| | | || || || || |||||||| || ||||||| ||| ||||| ||||| Sbjct 66881415 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 66881474 Query 45230 ACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACC 45289 | |||||||||||| |||||| || || | | | ||||| | ||| ||| Sbjct 66881475 ATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGACC 66881534 Query 45290 TCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||| ||| || || || || |||| |||||||| || || ||||| Sbjct 66881535 TCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 66881581 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 45146 TCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAAT 45205 |||||||| |||||||| ||| || || |||| || || |||||||||||||| Sbjct 65273144 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 65273085 Query 45206 ATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCC 45265 || | ||||| ||||| || || | || |||||||| |||||| ||| || Sbjct 65273084 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTG 65273025 Query 45266 GCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACA 45325 | | | |||| || ||| ||||| | ||| || |||||||| || || || || || Sbjct 65273024 TCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG 65272965 Query 45326 AAGATTTGCATGTT 45339 ||||| ||||| || Sbjct 65272964 AAGATCTGCATCTT 65272951 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 45125 AATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCG 45184 || ||||| ||||| ||| ||||| || ||||| ||||| || | | || Sbjct 66887752 AAAACCAAATGCAGAGTGGATTCCTTTTGGATGTTATAGTCCGCAAGCGTCCTCCCATCC 66887811 Query 45185 TCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || || || |||||||| || ||||||| ||| ||||| ||||| | |||||||||||| Sbjct 66887812 TCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCC 66887871 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 |||||| ||||| | | | ||||| | ||| ||||||| || || || Sbjct 66887872 TGAATTTTCGCTTTAACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAGTGTTATGGTT 66887931 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || || |||| ||||| || || || ||||| Sbjct 66887932 TTACCAGTCAAGGTCTTAACGAATATCTGCAT 66887963 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| || |||||| || ||||| || || || | | || || Sbjct 66887983 ACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCAAGCGTCCTCCCATCCTCG 66888042 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 ||||| ||||| || || ||||||| ||| ||||| || || | |||||||||||| Sbjct 66888043 AGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGG 66888102 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | |||| || ||||||||||| ||||| || || Sbjct 66888103 ATCTTGGCCTTCACGTTATCAATTGTGTCTGAACTCTCCACCTCCAATGTAATAGTTTTT 66888162 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||| |||||||| || ||||| Sbjct 66888163 CCAGTCAAAGTTTTCACAAAAATCTGCAT 66888191 Score = 86.0 bits (94), Expect = 5e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || || || || || || || || ||||| || |||||||| || || | || |||||| Sbjct 65274020 TCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGGCGGGATCCCTTCCTTG 65273961 Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301 ||| ||| || ||| || | | | ||||| || ||||||||||| ||| || Sbjct 65273960 TCCTGAATCTTCGCCTTTACATTGTCGATGGTGTCCGAACTCTCCACCTCCAAGGTGATG 65273901 Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| |||| || ||||| ||||| ||||| Sbjct 65273900 GTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 65273866 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 45124 TAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTC 45183 ||| || | ||| || ||| |||||||| |||||||| ||| || || |||| Sbjct 65273394 TAAGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTC 65273335 Query 45184 GTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTC 45243 || || |||||||||||||| || | ||||| ||||| || || | || |||||||| Sbjct 65273334 CTCGAGCTGTTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTC 65273275 Query 45244 CGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGT 45303 |||||| ||| || | | | |||| | ||| || || | ||| || || Sbjct 65273274 TTGAATTTTAGACTTCACATTATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGT 65273215 Query 45304 CTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||| || | || || || ||||| ||||| Sbjct 65273214 CTTGCCGGTTAAGGTTTTGACGAAGATCTGCAT 65273182 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||| ||||| || || || || ||| | | | || || Sbjct 66881601 ACCAAGTGGAGGGTAGACTCTTTCTGGATATTATAATCTGCAAGTGTCCTACCATCTTCG 66881660 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || ||||||| ||| || || || || | || ||||||||| Sbjct 66881661 AGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGG 66881720 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || || || | | | |||| || ||| || |||| ||||| ||||| Sbjct 66881721 ATCTTAGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACTTCCAAAGTAATAGTCTTT 66881780 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || |||||||||||||| ||||||||| Sbjct 66881781 CCGGTGAGAGTCTTCACAAAAATTTGCATG 66881810 >seq10 Length=62175169 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/209 (71%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 45134 TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCA--GTT-GGCGATCGTCGTCCAGT 45190 || || ||| ||||||||| |||||||| ||| || || ||| ||| ||| || Sbjct 51860879 TGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCCAAGGTCCGGCCATCTTCG---AGC 51860823 Query 45191 TGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATT 45250 |||||||||||||| || | || |||||||| || || | || |||||||| ||| Sbjct 51860822 TGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATT 51860763 Query 45251 TTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCC 45310 || |||||| | | |||| || ||| || || | ||| || |||||||| Sbjct 51860762 TTCGCCTTAACGTTGTCGATCGTGTCGGAACTCTCGACTTCGAGGGTGATGGTCTTGCCG 51860703 Query 45311 GTCAGAGTCTTCACAAAGATTTGCATGTT 45339 ||||| ||||| || ||||| ||||| || Sbjct 51860702 GTCAGGGTCTTAACGAAGATCTGCATCTT 51860674 >seq11 Length=62681010 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||| || |||||||| ||| || || |||| || || |||||||||||||| Sbjct 1163944 CTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAA 1164003 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| ||||| ||||| ||||| | || ||||| || ||||| ||| || Sbjct 1164004 GATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTCACGTT 1164063 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | ||| ||||| | || ||||||||||| || |||||||| || Sbjct 1164064 GTCGATCGTGTCGGAGCTCTCGACCTCGAGTGTGATCGTCTTGCCGGTTAGAGTCTTAAC 1164123 Query 45325 AAAGATTTGCATGTTG 45340 ||||| ||||| ||| Sbjct 1164124 GAAGATCTGCATCTTG 1164139 Score = 89.7 bits (98), Expect = 4e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||||||||| |||||||||||| || || |||| || ||||||||||||||||| Sbjct 1163716 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCGAGTTGTTTTCCGGCGAA 1163775 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | || || ||||| || || | || |||||||| || || |||||| Sbjct 1163776 GATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTCGCCTTAACGTT 1163835 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | |||| | ||| ||||| | || || |||||||| |||| || ||||| Sbjct 1163836 GTCGATCGTGTCGGAGCTCTCGACCTCGAGAGTGATTGTCTTGCCGGTCAAGGTTTTCAC 1163895 Query 45325 AAAGATTTGCAT 45336 ||||||||||| Sbjct 1163896 GAAGATTTGCAT 1163907 >seq6 Length=51074515 Score = 87.8 bits (96), Expect = 1e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || |||| |||||| || ||||| ||||| ||||||||||| || || | || |||||| Sbjct 42745356 TCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGGATGCCTTCCTTG 42745297 Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301 || ||| || |||||| | | | |||| || ||| || || | ||| || Sbjct 42745296 TCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACTTCGAGGGTGATG 42745237 Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||||||| || | || || ||||||||||||||| Sbjct 42745236 GTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCATG 42745201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395070221311714