Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq1034 609 7e-170 seq2 480 2e-131 seq1 434 3e-117 seq8 311 3e-80 seq12 279 1e-70 seq4 239 1e-58 seq6 237 5e-58 seq3 224 3e-54 seq5 210 6e-50 seq10 165 2e-36 >seq1034 Length=160161 Score = 609 bits (674), Expect = 7e-170 Identities = 732/987 (74%), Gaps = 6/987 (1%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 1445 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 1386 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| ||||||| || || || || Sbjct 1385 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCT 1326 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || ||||| || ||||| || || || | |||||||||||| Sbjct 1325 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAAT 1266 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || || ||||| |||||||||| |||||| Sbjct 1265 ATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGATC 1206 Query 19530 TGGGAAGCCGGCA-CTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGT 19588 |||||||| |||| || | ||||| ||||||||||| |||||||| ||| | | |||| Sbjct 1205 TGGGAAGC-GGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGTTAATTGT 1147 Query 19589 CTTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAG 19648 || ||||||||| | || ||||| ||| ||| | |||||||||| || | | Sbjct 1146 TTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1087 Query 19649 ATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGC 19708 | || ||| | || ||||| || |||||| |||| || | |||| ||| || Sbjct 1086 TCTGGGTATGCGCCCTTGGATCGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCGC 1027 Query 19709 TGTGTTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTA 19767 ||| ||||| | | || ||| |||| ||||| |||||| |||||||||||| || || | Sbjct 1026 TGT-TTTCTTGATCTATCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCCCTAGGAA 968 Query 19768 TCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATC 19827 ||||||| ||||| ||||| ||| | |||||||| || |||||||| ||||||||||||| Sbjct 967 TCTCTGGAACTTTCAACTTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCATC 908 Query 19828 CGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACG 19887 |||| |||||| | || || ||||| |||||||| || || || ||| ||||||||| | Sbjct 907 CGTTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 848 Query 19888 GAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATG 19947 | ||||| || || | |||| |||||| || || ||| ||| || | | Sbjct 847 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 788 Query 19948 GCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTG 20007 | || | ||||| ||||| ||||| || |||||||| || ||||| || || || |||| Sbjct 787 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTG 728 Query 20008 GGAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTG 20067 | ||||||| || ||||||||| |||||| ||||||||||||||||||||||| | | Sbjct 727 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 668 Query 20068 CTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCA 20127 || ||| || || || || || ||| | ||| | | || || ||||||||||||||| Sbjct 667 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 608 Query 20128 ACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCA 20186 |||| || ||||| || |||||||| || ||||||||| ||||| || |||| Sbjct 607 ACCTAAACGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAA-GGTCGTGTAATTAAT 549 Query 20187 ACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAAT 20246 || ||||||||| | | || | |||||||| || | ||||||||||| || || ||| Sbjct 548 ACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 489 Query 20247 GCTCATAACTTCCCACTTGATTTAGCT 20273 |||||||||||||| || || ||||| Sbjct 488 GCTCATAACTTCCCTCTAGACCTAGCT 462 >seq2 Length=62769430 Score = 480 bits (532), Expect = 2e-131 Identities = 652/904 (72%), Gaps = 4/904 (0%) Strand=Plus/Plus Query 19317 AACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCTTGCTTACTAGCTGCTACT 19376 ||||| ||||| | || |||||||| || | ||||| ||| |||| | || ||| Sbjct 26980603 AACCGTCTTTACATCGGATGGTTTGGTGTTTTAATGATCCCTACCTTATTGATCGCAACT 26980662 Query 19377 ACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAG 19436 || ||||| ||||||| || || || || || ||||||| ||||| || ||||| Sbjct 26980663 TCTGTATTTATTATCGCCTTCATTGCTGCTCCTCCAATAGATATTGATGGTATTCGTGAA 26980722 Query 19437 CCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCCAAGC 19496 || ||||| | || || | |||||||||||||||||||||||||| | ||| | Sbjct 26980723 CCTGTTTCTAGATCTCTACTTTACGGAAACAATATTATTTCTGGAGCCATTATTCTTACT 26980782 Query 19497 TCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCCGGCACTTTAGATGAGTGG 19556 || || ||||| | |||||||| |||||||||||||| | || | ||||| ||| Sbjct 26980783 TCTGCAGCTATAGGTTTACACTTTTACCCGATCTGGGAAGCGGTATCTGTTGATGAATGG 26980842 Query 19557 TTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAGCAGCA 19616 |||||||| |||| ||| ||| | | |||| || ||||||||| | || ||||| Sbjct 26980843 TTATACAATGGCGATCCTTATGAGTTAATTGTTTTACACTTCTTACTTGGTGTAGCTTGT 26980902 Query 19617 TACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATGAGACCATGGATATTCGTA 19676 ||| ||| | |||||||||| || | | | ||| | || || || | || Sbjct 26980903 TACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGAGTATGCGCCCTTGAATCGTTGTT 26980962 Query 19677 GCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCGTT-TACCCATTTGGGCA 19735 |||||| |||| || | |||| ||| |||| ||||| | | || ||| |||| || Sbjct 26980963 GCATATTCAGCTCCTGTTGCAGCTGCTACCACTGT-TTTCTTGATCTATCCAATTGGCCA 26981021 Query 19736 AGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGT 19795 | | |||||| |||||||||||| || || |||||||| ||||| ||||| ||| | || Sbjct 26981022 ATGAAGTTTTTTTGATGGTATGCCCCTAGGAATCTCTGGCACTTTCAACTTCATGATTGT 26981081 Query 19796 ATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGT 19855 |||| | || |||||||| |||||||||||||| || |||||| | || || ||||| | Sbjct 26981082 ATTCTAGGCTGAACACAACATCCTTATGCATCCATTTCACATGTTAGGCGTAGCTGGTTT 26981141 Query 19856 ATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAA 19915 |||| | || || || ||| ||||||||| || ||||| || || | |||| Sbjct 26981142 ATTCAGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTCTAGTTTGATCAG 26981201 Query 19916 GGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGAC 19975 |||||| || || ||| ||| || | || || ||||| ||||| ||||| || Sbjct 26981202 GGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACTGATTCGGTCAAGAGGAAGAAAC 26981261 Query 19976 ATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTT 20035 |||||||| || ||||| || || || ||||| ||||||| || ||||||||| ||| Sbjct 26981262 TTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTACAATATGCTAGTTT 26981321 Query 20036 CAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCT 20095 || ||||||||||||||||||||||| | ||| ||| || || || || || ||| | Sbjct 26981322 CAGCAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTT 26981381 Query 20096 TACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTC 20155 ||| | | || || ||||||||||||||||||| || ||||| || |||||||| || Sbjct 26981382 CACCGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTTAACCAATC 26981441 Query 20156 AGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTA 20214 ||||||||| ||||| || |||| || ||||||||| | | || | |||| Sbjct 26981442 CGTAGTTGATAGTCAA-GGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTA 26981500 Query 20215 ACCT 20218 |||| Sbjct 26981501 ACCT 26981504 Score = 453 bits (502), Expect = 3e-123 Identities = 695/986 (70%), Gaps = 21/986 (2%) Strand=Plus/Plus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 |||||| | ||| | || || || || || || ||||| | || |||||||| || | Sbjct 40943981 TTTTGTAATTGGATAACCAGCACTGAAAATCGTCTTTACATCGGATGGTTTGGTGTTTTG 40944040 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| | |||| ||||||| || |||| || Sbjct 40944041 ATGATCCCTACCTTATTGACCGCAACTTTTATATTTACTATCGCCTTCATTACAGCTCCT 40944100 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 | ||||||| ||||| || ||||| || |||| || |||||||| Sbjct 40944101 ACAATAGATATTGATGGTATTCGTGAACCTGTTT---------------ACAGAAACAAT 40944145 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || | ||||| |||||||||| ||||| Sbjct 40944146 ATTATTTCTGGTGCCATTATTCCTACTTCTGTAGTTATAGGTTTGCACTTTTACTCGATC 40944205 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 ||||||| | || | ||||| ||||||||||| ||||| |||||| | | |||| Sbjct 40944206 AGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGCGGCCCATATGAGTTAATTGTT 40944265 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 || ||||||||| | || ||||| ||| ||| | |||||||||| | || | Sbjct 40944266 TTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACT-TAGTATCCA 40944324 Query 19650 T-TAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGC 19708 | | || ||| | || ||||| || |||||| || | | | | | ||| | Sbjct 40944325 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAACTCTTATTGTAACTGCTACCAC 40944384 Query 19709 TGTGTTTCTCGTTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTAT 19768 ||| || | | || ||| || | | ||| |||||| |||||||||||| || || || Sbjct 40944385 TGTTTTCTTAATCTATCCAATTAGTCGAGGAAGTTTTTCTGATGGTATGCCCCTAGGAAT 40944444 Query 19769 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCC 19828 |||||| ||||| || || ||| | |||||||| || |||||||| |||||||||||||| Sbjct 40944445 CTCTGGCACTTTCAAATTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCATCC 40944504 Query 19829 GTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGG 19888 ||| |||||||| || || ||| | ||||||||| | || | ||| ||||||||| || Sbjct 40944505 GTTTCACATGCTAGGCGTAGCTAGTGTATTCGGTAGCTC-CCATTCAGTGCTATGCATGG 40944563 Query 19889 AAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGG 19948 ||||| || || | |||| |||||| || || ||| ||| || | || Sbjct 40944564 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGG 40944623 Query 19949 CTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGG 20008 ||||| || || || | ||||| || | |||||| || ||||| || || || ||| | Sbjct 40944624 TTATAAATTTGGTCAGTAGGAAGAAACTTCTAATATCGTAGCTGCTCATGGTTA-TTTTG 40944682 Query 20009 GAGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGC 20068 | |||||| || ||||||||| |||||| ||||||||||||||||||||||| | || Sbjct 40944683 GTCATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAGC 40944742 Query 20069 TACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAA 20128 | ||| || || || || ||| | ||| | || || |||||||||||||||| Sbjct 40944743 TGCTTGGCCTAGAGTAGGTATCTGGTTCACCGTTTTAGGTATTAGCACTATGGCTTTCAA 40944802 Query 20129 CCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAA 20187 ||| || ||||| || |||||||| || |||||||| ||||| | | |||| | Sbjct 40944803 CCTAAACGGTTTCAATTTTAACCAATCCATAGTTGATAGTCAAAGTCGTG-TAATTAATA 40944861 Query 20188 CATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATG 20247 | ||||||||| | | ||| | |||||||| || | ||||||||||| || || |||| Sbjct 40944862 CCTGGGCTGATATTATTAATTGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 40944921 Query 20248 CTCATAACTTCCCACTTGATTTAGCT 20273 ||||||||||||| || || ||||| Sbjct 40944922 CTCATAACTTCCCTCTAGACCTAGCT 40944947 Score = 210 bits (232), Expect = 6e-50 Identities = 249/335 (74%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 19696 CAGCAGCTCTTGCTGTGTTTCTCGTTTAC-CCATTTGGGCAAGGGAGTTTTAGTGATGGT 19754 |||| ||| ||||| ||||| | | | ||| |||| ||||| |||||| |||||||| Sbjct 11753836 CAGCTGCTACCGCTGT-TTTCTTGATCAATCCAATTGGTCAAGGAAGTTTTTGTGATGGT 11753778 Query 19755 ATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAAT 19814 ||||| || || || ||||| ||||| ||||| ||| | || ||| | || |||||||| Sbjct 11753777 ATGCCCCTAGGAATTTCTGGCACTTTAAACTTCATGATTGTTTTCTAGGCTGAACACAAC 11753718 Query 19815 ATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTC 19874 |||||||| |||||||| |||||| | || || ||||| ||||||| | || || ||| Sbjct 11753717 ATCCTTATCCATCCGTTTCACATGTTAGGCGTAGCTGGTATATTCGGCGACTCCCTATTC 11753658 Query 19875 TCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTA 19934 ||||||||| || |||||| || || | |||| |||||| || || ||| | Sbjct 11753657 AGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAA 11753598 Query 19935 TCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCA 19994 || || | || || | ||||| ||||| ||||| || |||||||| || ||||| Sbjct 11753597 TCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCT 11753538 Query 19995 CACGGGTACTTTGGGAGATTGATATTTCAATATGC 20029 || || || ||||| ||||||| || |||||||| Sbjct 11753537 CATGGTTATTTTGGTCGATTGATCTTCCAATATGC 11753503 Score = 206 bits (228), Expect = 8e-49 Identities = 231/305 (76%), Gaps = 3/305 (1%) Strand=Plus/Plus Query 19970 AGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGC 20029 ||| || |||||||| || ||||| || || || ||||| ||||||| || |||||||| Sbjct 48290110 AGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 48290169 Query 20030 TTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCAT 20089 | |||||| |||| |||||||| ||||||||| | ||| ||| || || || || || Sbjct 48290170 TAGTTTCAACAATTTTCGTTCTT-ACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTAT 48290228 Query 20090 ATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAA 20149 ||| | ||| | | || || ||||||||||||||||||| || ||||| || ||||| Sbjct 48290229 CTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTTAA 48290288 Query 20150 CCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATA 20208 ||| || ||||||||| ||||| || |||| || |||||| || | | || Sbjct 48290289 CCAATCCGTAGTTGATAGTCAA-GGTCGTGTAATTAATACCTGGGCTAATATTATTAACC 48290347 Query 20209 GAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATT 20268 | |||||||| || | ||||||||||| || || ||||||||||||||||| || || Sbjct 48290348 GTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACC 48290407 Query 20269 TAGCT 20273 ||||| Sbjct 48290408 TAGCT 48290412 Score = 147 bits (162), Expect = 6e-31 Identities = 189/257 (74%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 20019 TTTCAATA-TGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCC 20077 |||||| | | || |||||| |||||| |||||||||||||||| | || ||| | Sbjct 47970441 TTTCAACAATTCTAGTTTCAACAATTCTAGTTCTTTACATTTCTTCTTAACTGCTTGGCG 47970500 Query 20078 CGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGG 20137 || || || || ||| | || | | || || | ||||||||||||||||| ||||| Sbjct 47970501 TGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGAACTATGGCTTTCAACCTAAATGG 47970560 Query 20138 TTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGCTG 20196 ||| || |||||||| || || ||||| ||||| || |||| || | |||| Sbjct 47970561 TTTCAATTTTAACCAATCCATATTTGATAGTCAA-GGTTGTGTAATTAATACCTAAGCTG 47970619 Query 20197 ATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAACT 20256 || | | ||| | |||| ||| || | ||||||||||| || || ||||||||||||| Sbjct 47970620 ATATTATTAATCGTGCTATCCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACT 47970679 Query 20257 TCCCACTTGATTTAGCT 20273 |||| ||||| |||||| Sbjct 47970680 TCCCTCTTGACTTAGCT 47970696 Score = 122 bits (134), Expect = 3e-23 Identities = 137/181 (76%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 19433 TGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCTGGAGCAGTAGTTCC 19492 ||| || ||||| | || || | ||||||||||||||||||||||| || | |||| Sbjct 11756653 TGAACCTGTTTCTAGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCC 11756594 Query 19493 AAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCCGGCACTT-TAGATG 19551 | || || ||||| |||||||||| |||||||||||||| |||| || | |||| Sbjct 11756593 TACTTCTGCAGCTATAGGTTTGCACTTTTACCCGATCTGGGAAGC-GGCATTTGTTGATG 11756535 Query 19552 AGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTAATAGGAGTAG 19611 | ||||||||||| || | ||| ||| | | |||| || ||||||||| | || |||| Sbjct 11756534 AATGGTTATACAATGGTGATCCTTATGAGTTAATTGTTTTACACTTCTTACTTGGTGTAG 11756475 Query 19612 C 19612 | Sbjct 11756474 C 11756474 >seq1 Length=55868233 Score = 434 bits (480), Expect = 3e-117 Identities = 621/864 (72%), Gaps = 8/864 (1%) Strand=Plus/Plus Query 19414 TAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTA 19473 ||||||| ||||| || ||||| || ||||| || || || | ||| ||||||||||| Sbjct 42543287 TAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACAAAAACAATATTA 42543346 Query 19474 TTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGG 19533 ||||||| ||| | |||| | || | || ||||| |||||||||| ||||||| || Sbjct 42543347 TTTCTGGTGCAATTATTCCTACTTCTACAGCTATAGGTTTGCACTTTTACCCGATCTAGG 42543406 Query 19534 AAGCCGGCA-CTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTC 19592 |||| | || || | |||| ||||||||||| ||| ||| ||| | | |||| | Sbjct 42543407 AAGC-GACATCTATTAATGAATGGTTATACAATGGCAATCCTTATGATTTAATTGTTTAA 42543465 Query 19593 CACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTA 19652 ||||||||| | || ||||| ||| || | |||||||||| || | | Sbjct 42543466 CACTTCTTACTTGGTGTAGCTTGTTACATGGGCTGTGAGTGGGAACTTAGTTTCCGTCCG 42543525 Query 19653 GGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTG 19712 || ||| || ||||| || |||||| |||| | | |||| ||| ||||| Sbjct 42543526 GGTATGCACCCTTGGATCGCTGTTGCATATTCAGCTCATATTGCAGCTGCTACCGCTGT- 42543584 Query 19713 TTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTC 19771 ||||| | | || |||||||| ||||| ||| || |||||||||||| || || ||||| Sbjct 42543585 TTTCTTGATCTATCCATTTGGTCAAGGAAGTATTTCTGATGGTATGCCCCTAGGAATCTC 42543644 Query 19772 TGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTT 19831 | | ||||| ||||| ||| | |||||| | || |||||||| ||||||||||||||||| Sbjct 42543645 TAGCACTTTCAACTTCATGATTGTATTCTAGGCTGAACACAACATCCTTATGCATCCGTT 42543704 Query 19832 CCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAG 19891 | |||| | | || ||||| |||||||| || | ||| ||||||||| || Sbjct 42543705 TCCCATGTTAGACGTAGCTGGTGTATTCGGCAACTCCTTGTTCAGTGCTATGCATGGTTC 42543764 Query 19892 TTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTA 19951 ||||| || || | ||||||||||| || || ||| ||| || | || || Sbjct 42543765 CTTGGTAACCTCTAGTTTGATCAAGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTA 42543824 Query 19952 TAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAG 20011 | ||| | ||||| ||||| || |||||||| || | ||| || || || ||||| | Sbjct 42543825 CAGATTCAGTCAAGAGGAAGAAACTTATAATATCGTAGTTGCTCATGGTTATTTTGGCCG 42543884 Query 20012 ATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTT-GCTA 20070 |||||| || ||||||||| |||||| |||||||||||||||||||| |||||| ||| Sbjct 42543885 ATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTT-TTTCTTAGCTG 42543943 Query 20071 CTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACC 20130 || | || || || || ||| | ||| | | | || |||||||||||||||||| Sbjct 42543944 ATTGGCATGTAGTAGGTATTTGGTTCACCGCTTTAGCTATTAGCACTATGGCTTTCAACC 42544003 Query 20131 TTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACA 20189 | || ||| || ||| || | || ||||||||| ||||| || |||| ||| Sbjct 42544004 TAAACAATTTCAATTTTTACTAATCCGTAGTTGATAGTCAA-GGTCGTGTAATTAAAACC 42544062 Query 20190 TGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCT 20249 ||||||||| | | || | |||||||| || | ||||||||||| || |||||| Sbjct 42544063 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATATAATGCT 42544122 Query 20250 CATAACTTCCCACTTGATTTAGCT 20273 |||||||||| || || ||||| Sbjct 42544123 TATAACTTCCCTCTAGACCTAGCT 42544146 >seq8 Length=57128820 Score = 311 bits (344), Expect = 3e-80 Identities = 384/521 (74%), Gaps = 3/521 (1%) Strand=Plus/Plus Query 19713 TTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTC 19771 ||||| | | || ||| |||| |||| |||||| |||||||||||| || || ||||| Sbjct 36805167 TTTCTTGATCTATCCAATTGGTTAAGGAAGTTTTTCTGATGGTATGCCCCTAGGAATCTC 36805226 Query 19772 TGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTT 19831 ||| ||||| ||||| ||| | |||||||| || |||||||| |||||||||||| |||| Sbjct 36805227 TGGCACTTTCAACTTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCATTCGTT 36805286 Query 19832 CCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAG 19891 |||||| | || || ||||| |||||||| || || || ||| ||||||||| || Sbjct 36805287 TCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC 36805346 Query 19892 TTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTA 19951 ||||| ||||| | ||||||||||| || || | | ||| || | || || Sbjct 36805347 CTTGGTAACTTCTAGTTTGATCAAGGAAACCACAGAAAAAGAATCTGCTAATAAAGGTTA 36805406 Query 19952 TAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAG 20011 | ||||| ||||| ||||| || |||||||| || ||||| || || || ||||| | Sbjct 36805407 CAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCG 36805466 Query 20012 ATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTAC 20071 |||||| || |||||||| |||||| |||||||||||||| |||||||| | | | Sbjct 36805467 ATTGATCTTCTAATATGCTAGTTTCAACAATTCTCGTTCTTTCCATTTCTTCTTAGTGGC 36805526 Query 20072 TTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCT 20131 || | || || || || | | | ||| | | || || ||||||||||||||||||| Sbjct 36805527 TTGGCATGTAGTAGGTATCTAGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACCT 36805586 Query 20132 TAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACAT 20190 || ||||| || |||||||| | ||||||||| ||||| || |||| || | Sbjct 36805587 AAACGGTTTCAATTTTAACCAATTCGTAGTTGATAGTCAA-GGTCGTGTAATTAATACCT 36805645 Query 20191 GGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTT 20231 |||||||| | | || | |||||||| | | |||||| Sbjct 36805646 GGGCTGATATTATTAACCGTGCTAACCTTAGTATGGAAGTT 36805686 >seq12 Length=35429946 Score = 279 bits (308), Expect = 1e-70 Identities = 593/877 (68%), Gaps = 34/877 (4%) Strand=Plus/Minus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||| | || || || | || || ||||| | | |||||||| || | ||||| ||| Sbjct 23256690 TGGATTACCAGCACTAAAAATCGTCTTTACATCGAATGGTTTGGTGTTTTGATGATCCCT 23256631 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 |||| | | ||| | ||||| |||||||||| || | || || ||||| Sbjct 23256630 ACCTTATTGATCGTAACTTTTGTATTTATTATCGCCTTTATTGCTACTCCTCCAATAGAT 23256571 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478 || ||||| || ||||| || |||| || | || | |||| |||||||||||||| | Sbjct 23256570 ATTGATGGTATTCGTGAACCTGTTTTTGGATATCTACTTTACGAAAACAATATTATTTAT 23256511 Query 19479 GGAG-CAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGC 19537 || | || || |||| | | || ||||| |||||||||| | |||||| || Sbjct 23256510 GGTGTCATTA-TTCCTACTTTTGCAGCTATAGGTTTGCACTTTTACCTGATCTGAAAAAG 23256452 Query 19538 CGGCACTT-TAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACT 19596 || ||| | | ||||| ||||||||||| ||||||| ||| | | |||| || |||| Sbjct 23256451 CGACACCTATTGATGAATGGTTATACAATGGCGGTCTTTATAAGTTAATTGTTTTACACT 23256392 Query 19597 TCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGA- 19655 | ||| | |||| ||||||||| || | | |||| Sbjct 23256391 TTTTACT---------------------TAGA--GTGGGAACTTAGTTTTTG-TCAGGAT 23256356 Query 19656 ATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTT 19715 ||| | || |||| || |||||| || | || | || ||| |||| ||| Sbjct 23256355 ATGCGCCCTTGGACCACTGTTGCATATTCAACTCCTGTTGTAGTTGCTACCACTGT-TTT 23256297 Query 19716 CTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGG 19774 || | | || ||| |||| |||| ||||| ||||||||||| | || |||||| | Sbjct 23256296 CTTGATCTATCCAATTGGTTAAGGAAGTTTCTCTGATGGTATGCTCGTAGGAATCTCTAG 23256237 Query 19775 TACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCA 19834 |||||| ||||| ||| | |||||| | || |||||||| |||||||||||| ||| || Sbjct 23256236 TACTTTCAACTTCATGATTGTATTCTAGGCTGAACACAACATCCTTATGCATATGTTTCA 23256177 Query 19835 CATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTT 19894 |||| | || | | ||| ||||||| || || || ||| ||||||| || | Sbjct 23256176 CATGTTAGGCATAGTTGGTATATTCGGCGGCTCCCTATTCAGTGCTATGTTTGGTTCCAT 23256117 Query 19895 GGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAA 19954 | | ||||| | |||| ||||| || || ||| ||| || || |||| Sbjct 23256116 GTTAACTTCTAGTTTGATCAGAGAAACCACAGAAAATGAATCCACTAATGGAGGTTATAG 23256057 Query 19955 GTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATT 20014 |||| ||||| |||| | ||||||| ||| || | || || ||||| |||| Sbjct 23256056 ATTCGATCAAGAGAAAGAAATTTATAATACTGTAACTACTCATCATTATTTTGGCCGATT 23255997 Query 20015 GATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTT-GCTACTT 20073 ||| || ||||||| | |||||| ||||||| ||||||||||| |||||| ||||||| Sbjct 23255996 GATCTTCCAATATGTTAGTTTCAAAAATTCTCATTCTTTACATT--TTTCTTAGCTACTT 23255939 Query 20074 TCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTA 20133 | ||||| || || | | ||||| | | || || ||| |||| |||||| | | | Sbjct 23255938 GGCTTGTGGTAGGTATCTAGTTTACCGCTTTAGGTATTAGCAATATGACTTTCAGCTTAA 23255879 Query 20134 ATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCA 20169 || ||| || |||||||| || ||||||||| |||| Sbjct 23255878 ATACTTTCAATTTTAACCAATCCGTAGTTGATAGTCA 23255842 Score = 168 bits (186), Expect = 2e-37 Identities = 254/356 (71%), Gaps = 10/356 (3%) Strand=Plus/Plus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || | || ||||| | | |||||||| || | Sbjct 33103830 TTCTGTAATTGGATAACTAGCACTGAAACTCGTCTTTACATCGAATGGTTTGGTGTGTTG 33103889 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| || ||||| ||||||| || || || || Sbjct 33103890 ATGATCCCTATCTTATTGACCGCAACTTCTGTATTTATTATCGCCTTCATTGCTGCTCCT 33103949 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| ||||| || ||||| || ||||| || || || | |||||||||||| Sbjct 33103950 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAAT 33104009 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || ||| ||||| |||||||||| | |||| Sbjct 33104010 ATTATTTCTGGTGCCATTATTCCTACTTC---TGCTATAGGTTTGCACTTTTACCTGATC 33104066 Query 19530 TGGGAAGCCGGCA-CTTTAGATGAGTGGTTATACAA---CGGCGGTCCATATCAACTTGT 19585 ||||||| || || || | ||||| ||||||||||| ||| ||| ||| | | | Sbjct 33104067 TGGGAAG-CGACATCTGTTGATGAATGGTTATACAATATTGGCAATCCTTATGAGTTAAT 33104125 Query 19586 TGTCTTCCACTTCTTA--ATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACT 19639 ||| || ||||||||| || || ||||| ||| ||| | |||||||||| Sbjct 33104126 TGTTTTACACTTCTTACTATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACT 33104181 Score = 150 bits (166), Expect = 5e-32 Identities = 229/322 (71%), Gaps = 3/322 (1%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 |||||| | ||| | || | || || ||||| ||||| | || |||||||| || | Sbjct 32314312 TTTTGTAATTGGATAACCAACACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 32314253 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| ||| | | || ||| | ||||| ||||||| || | || || Sbjct 32314252 ATGATCCCTACATTATTGACCGCAACTTTTGTATTTATTATCGCCTTCATTACTGCTCCT 32314193 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 | |||||||| ||||| || ||||| || ||||| | || || | |||||||||||| Sbjct 32314192 CTAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGAATCTCTACTTTACGGAAACAAT 32314133 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 ||||||||||| || | |||| | || || || | |||||||||| |||||| Sbjct 32314132 ATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATTCGTTTGCACTTTTACCCGATC 32314073 Query 19530 TGGGAAGCCGGCA-CTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGT 19588 ||||||| ||||| || | ||||| | | ||||||| || ||||| ||| | | |||| Sbjct 32314072 TGGGAAG-CGGCATCTGTTGATGAATAG-TATACAATGGTGGTCCTTATGAGTTAATTGT 32314015 Query 19589 CTTCCACTTCTTAATAGGAGTA 19610 | ||||||||| | || ||| Sbjct 32314014 TTAACACTTCTTACTTGGTGTA 32313993 >seq4 Length=62178258 Score = 239 bits (264), Expect = 1e-58 Identities = 246/319 (77%), Gaps = 2/319 (1%) Strand=Plus/Plus Query 19956 TTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTG 20015 ||||| ||||| ||||| || |||||||| || | ||| || || || ||||| ||||| Sbjct 6177722 TTCGGTCAAGAGGAAGAAACTTATAATATCGTAGTTGCTCATGGTTATTTTGGCCGATTG 6177781 Query 20016 ATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTC 20075 || || ||||||||| |||||||||||||||||||||||||||||| | |||||| Sbjct 6177782 ATCTTCCAATATGCTAGTTTCAATAATTCTCGTTCTTTACATTTCTTCTTAACTACTTGG 6177841 Query 20076 CCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAAT 20135 || || || || || ||| | ||| | | || || ||||||||||||||||||| || Sbjct 6177842 CCTGTAGTAGGTATCTGGTTCACCACTTTAGGTATTAGCACTATGGCTTTCAACCTAAAC 6177901 Query 20136 GGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACGGAAAGATAATCCCAACATGGGC 20194 ||||| || |||||||| || ||||||||| ||||| || |||| || ||||| Sbjct 6177902 GGTTTCAATTTTAACCAATCCGTAGTTGATAGTCAA-GGTCGTGTAATTAATACCTGGGC 6177960 Query 20195 TGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCATAA 20254 |||| | | || | |||||||| || | ||||||||||| || || ||||||||||| Sbjct 6177961 TGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAA 6178020 Query 20255 CTTCCCACTTGATTTAGCT 20273 |||||| || || ||||| Sbjct 6178021 CTTCCCTCTAGACCTAGCT 6178039 >seq6 Length=51074515 Score = 237 bits (262), Expect = 5e-58 Identities = 350/493 (71%), Gaps = 2/493 (0%) Strand=Plus/Minus Query 19674 GTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCGTT-TACCCATTTGG 19732 || |||||| |||| || | || | ||| |||| ||||| | | || ||| |||| Sbjct 37650325 GTTGCATATTCAGCTCCTGTTGCAACTGCTACCACTGT-TTTCTTGATCTATCCAATTGG 37650267 Query 19733 GCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTT 19792 |||| |||||| |||||| ||||| || || |||| ||| ||||| ||||||||| | Sbjct 37650266 TCAAGAAAGTTTTTCTGATGGCATGCCCCTAGGAATCTTTGGCACTTTCAACTTTATGAT 37650207 Query 19793 CGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGG 19852 ||| |||| ||| |||| ||||||| ||||||||| |||||| | || || ||||| Sbjct 37650206 TGTAATCCAGATTGAATACAACATCCTTACGCATCCGTTTCACATGTTAGGCGTAGCTGG 37650147 Query 19853 CGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCAT 19912 |||| || || || || ||| |||||| | || ||||| || || | || Sbjct 37650146 TGTATGCGACGGCTCCCTATTCAGTGCTATATATGGTTCATTGGTAACCTCTAGTTTGAT 37650087 Query 19913 CAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGA 19972 || |||||| || || || | | || | | || | ||| | ||||| ||||| Sbjct 37650086 CAGGGAAACCACAGAAAATAAACCTGCTAATGAAGATTACAGATTCAGTCAAGAGGAAGA 37650027 Query 19973 GACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTC 20032 || |||||||| || ||||| || | || ||||| ||||||| || |||||| || Sbjct 37650026 AACTTATAATATCGTAGCTGCTCATGATTATTTTGGCCGATTGATCTTCCAATATACTAG 37649967 Query 20033 TTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATG 20092 |||||||||||||| ||||||||||||||| | ||| ||| || | || || ||||| Sbjct 37649966 TTTCAATAATTCTCATTCTTTACATTTCTTCTTAGCTGCTTAGCCTATAGTAGGTATATG 37649907 Query 20093 GCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCA 20152 | | ||| | | || || |||||||| |||||||| | || ||| || ||||| || Sbjct 37649906 GTTCACCGCTTTAGGTATTAGCACTATGACTTTCAACTTAAACAATTTCAATTTTAATCA 37649847 Query 20153 GTCAGTAGTTGAT 20165 || ||| || || Sbjct 37649846 ATCCGTAATTAAT 37649834 Score = 159 bits (176), Expect = 1e-34 Identities = 310/457 (68%), Gaps = 2/457 (0%) Strand=Plus/Plus Query 19548 GATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTAATAGGA 19607 ||||| | ||| ||||| |||||||| ||| | | || | || ||||||||| | || Sbjct 39117554 GATGAATTGTTGTACAATGGCGGTCCTTATGAGTTAATTCTTTTACACTTCTTACTTGGT 39117613 Query 19608 GTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATGAGACCATGG 19667 |||| ||| ||| |||||||||| || | |||| ||| | || ||| Sbjct 39117614 ATAGCTTGTTACATGGGTCATGAGTGGGAACTTAGTTTCCTTCTAGGTATGCGCCCTTGG 39117673 Query 19668 ATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCGTTTACCCA 19727 || | || |||||| || | || | ||| ||| | ||| || | | || ||| Sbjct 39117674 ATCATTGTTGCATATTCAACTCCTGTTGCAGTTGCTACCGTTGTTTTATTGATCTATCCA 39117733 Query 19728 TTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTT 19787 |||| ||||| |||||| | || ||||||| || || |||||||| ||||||||||| Sbjct 39117734 ATTGGTCAAGGAAGTTTTTCTTATTGTATGCCCCTAGGAATCTCTGGCACTTTTAACTTC 39117793 Query 19788 ATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTT 19847 ||| || ||||||| | || ||||| || |||||||||| ||| |||| | | | Sbjct 39117794 ATGATCTTATTCCAGACTGAGCACAACATTCTTATGCATCTGTTTTACATATTAAGCATA 39117853 Query 19848 GCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCG 19907 | | | |||||||| || || || ||| ||||||||| || ||||| || || Sbjct 39117854 GTTAGTGTATTCGGCGGCTCCCTATTCAATGCTATGCATGGTTCCTTGGTAACCTCTAGT 39117913 Query 19908 ATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGAT 19967 | |||| |||||| || || ||| ||| || | || || | ||||| | ||| Sbjct 39117914 TTGATCAGGGAAACCACAGAAAATGAATCTACTAATGAAGGTTACAGATTCGGTCGAGAA 39117973 Query 19968 GAAGA--GACATATAATATTGTCGCTGCACACGGGTA 20002 ||| | || |||||||| | ||||| || || || Sbjct 39117974 GAATATCAACTTATAATATCATAGCTGCTCATGGTTA 39118010 Score = 93.3 bits (102), Expect = 1e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 19962 CAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTT 20021 ||||| ||||| || | |||||| || | || || || || ||||| ||||||| ||| Sbjct 49124987 CAAGAGGAAGAAACTTGTAATATCGTAGTAGCTCATGGTTAATTTGGTTGATTGATCTTT 49124928 Query 20022 CAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTT 20062 ||||||||| |||||| | || |||||||||||||||||| Sbjct 49124927 CAATATGCTAGTTTCAACAGTTATCGTTCTTTACATTTCTT 49124887 >seq3 Length=45765648 Score = 224 bits (248), Expect = 3e-54 Identities = 310/434 (71%), Gaps = 0/434 (0%) Strand=Plus/Plus Query 19730 TGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACTTTTAACTTTAT 19789 ||| ||||| |||||| |||||||||| |||| || || | ||||||||| ||||| | Sbjct 43949085 TGGTCAAGGAAGTTTTTCTGATGGTATGGCTCTAGGAATATTTGGTACTTTCAACTTCGT 43949144 Query 19790 GTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGC 19849 | | |||||| |||| ||||||||||||||||||||| || |||||| | || | | Sbjct 43949145 GATTGTATTCTAAGCTTAACACAATATCCTTATGCATCTATTTCACATGTTAGGCATAGT 43949204 Query 19850 TGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGAT 19909 ||| |||||||| || || | ||| || || ||||| ||||| || || | Sbjct 43949205 TGGTGTATTCGGCGGCTCCCCATTCAGTGTTACACACGGTTCCTTGGTAACCTCTAATTT 43949264 Query 19910 CATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGA 19969 |||| |||||| || | || || || | || || | ||||| ||| | || Sbjct 43949265 GATCAGGGAAACCACAAAAATTGAATTTGCTAATGAAGGTTACAGATTCGGTCAACAGGA 43949324 Query 19970 AGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGC 20029 ||| || |||||||| || | ||| | || || ||| | |||||| ||||||||||| Sbjct 43949325 AGAAACTTATAATATCGTAGTTGCTTATGGTTATTTTAGTCAATTGATCTTTCAATATGC 43949384 Query 20030 TTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCAT 20089 | || ||| |||| | || | || ||||||| | ||||||| || || || || || Sbjct 43949385 TAGTTGCAACAATTATTATTTTGTATATTTCTTCTTAGCTACTTGGCCTGTAGTAGGTAT 43949444 Query 20090 ATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAA 20149 ||| | || | | || || |||||||| |||||||||| |||||||| || ||||| Sbjct 43949445 CTGGTTCACAACTTTAGGTATTAGCACTATGACTTTCAACCTAAATGGTTTCAATTTTAA 43949504 Query 20150 CCAGTCAGTAGTTG 20163 ||| | ||||||| Sbjct 43949505 CCAATTTGTAGTTG 43949518 Score = 82.4 bits (90), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 19548 GATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTCTTCCACTTCTTAATAGGA 19607 ||||| ||||||||||| |||||||| ||| | || |||| | ||||||||| | || Sbjct 43948849 GATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTAGTTGGT 43948908 Query 19608 GTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGATTAGGAATGAGACCATGG 19667 ||||| ||| || || |||||||||| || | | || ||| | ||| Sbjct 43948909 GTAGCTTGTTACATGTGTCGAGAGTGGGAACTTAGTTTCCG----GGTATGCACCTTTGG 43948964 Query 19668 ATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCTGTGTTTCTCGTTTACCCA 19727 || | || |||||| || || | || | ||| | ||| | || | | || || Sbjct 43948965 ATCATTGTTGCATATTCAATTCCTATTGCAACTGCTATCGCTATTTTCTTAATCTATTCA 43949024 Query 19728 TTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTCTGGTACT 19778 ||| ||||| |||||| |||||||||| |||| || || | ||||||| Sbjct 43949025 AGTGGTCAAGGAAGTTTTTCTGATGGTATGGCTCTAGGAATATTTGGTACT 43949075 >seq5 Length=64140413 Score = 210 bits (232), Expect = 6e-50 Identities = 295/409 (72%), Gaps = 4/409 (1%) Strand=Plus/Plus Query 19866 TCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACT 19925 || || ||| ||||||||| || |||||| || || | ||||||||||| || Sbjct 49880348 TCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTCTAGTTTGATCAAGGAAACCACA 49880407 Query 19926 GAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATT 19985 || ||| ||| || | || |||| ||||| ||||| | ||| || |||| ||| Sbjct 49880408 GAAAATGAATCTGCTAATGAAGGTTATAGATTCGGTCAAGA-GTAGAAACTTATA-TATC 49880465 Query 19986 GTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTTCAATAATTCT 20045 || ||||| | || || ||||| ||||||| |||||||||||| |||||| |||||| Sbjct 49880466 GTAGCTGCTCTTGGTTATTTTGGCCGATTGATCTTTCAATATGCTAGTTTCAACAATTCT 49880525 Query 20046 CGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATG 20105 ||||||||||||||||| | ||| ||| || || || || || ||| | | | | Sbjct 49880526 CGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTCCATCGCTTTA 49880585 Query 20106 GGAATCTGCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT 20165 | || |||||||||||||||||| || ||||| || |||||||| || ||| ||||| Sbjct 49880586 GCTATTAGCACTATGGCTTTCAACCAAAACGGTTTCAATTTTAACCAATCTGTATTTGAT 49880645 Query 20166 -GTCAACGGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATT 20224 ||||| || |||| || ||||||||| | | || | |||||||| || | Sbjct 49880646 AGTCAA-GGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTAT 49880704 Query 20225 TGAAGTTATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAGCT 20273 |||||||||| || || || |||||||||| ||| || || ||||| Sbjct 49880705 GAAAGTTATGCATGAACGAAAAGCTCATAACTACCCTCTAGACCTAGCT 49880753 Score = 100 bits (110), Expect = 8e-17 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 20114 CACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAACG 20172 |||||| |||||||| | ||| |||| || |||||||| | ||||||||| ||||| | Sbjct 8904794 CACTATAGCTTTCAATTTAAATAGTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGG 8904853 Query 20173 GAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTA 20232 | | |||| | |||| |||| | | ||| |||||||||| || | ||||||| Sbjct 8904854 TAGTG-TAATTAATATTTGGGTTGATATTATTAATCGAGCTAACCTTGGTATGGAAGTTA 8904912 Query 20233 TGCACGAGCGCAATGCTCATAACTTCCCACTTGA 20266 |||| || | ||||||||||||||||| || || Sbjct 8904913 TGCATGAACATAATGCTCATAACTTCCCTCTAGA 8904946 Score = 100 bits (110), Expect = 8e-17 Identities = 121/162 (75%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 20113 GCACTATGGCTTTCAACCTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGAT-GTCAAC 20171 ||||||||||||||||||| || | |||||| |||||| | || |||||| || || || Sbjct 36123717 GCACTATGGCTTTCAACCTAAACGATTTTAATTTTAACTAATCTGTAGTTAATAGTTAAA 36123658 Query 20172 GGAAAGATAATCCCAACATGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTT 20231 | | |||| | || || |||| | | ||| | |||||||| | | |||||| Sbjct 36123657 GTTGTG-TAATTAATAGATAGGTTGATATTATTAATCGTGCTAACCTTAGTATGGAAGTT 36123599 Query 20232 ATGCACGAGCGCAATGCTCATAACTTCCCACTTGATTTAGCT 20273 ||||| || || ||||||||||||||||| || || ||||| Sbjct 36123598 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGCT 36123557 >seq10 Length=62175169 Score = 165 bits (182), Expect = 2e-36 Identities = 237/332 (71%), Gaps = 3/332 (1%) Strand=Plus/Plus Query 19713 TTTCTCGTT-TACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATCTC 19771 ||||| | | || ||| |||| ||||| |||||| | |||||||||||| || |||| Sbjct 12550684 TTTCTTGATCTATCCAATTGGTCAAGGAAGTTTTCG--ATGGTATGCCTCGAGGAATCTT 12550741 Query 19772 TGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCGTT 19831 ||| ||||| ||||| ||| | ||||||||||| |||||| ||| |||| |||||||| Sbjct 12550742 TGGCACTTTCAACTTCATGATTGTATTCCAAGCTAAACACAGCATCTTTATACATCCGTT 12550801 Query 19832 CCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAG 19891 |||||| | || | ||| ||||||||||| || | || || |||| | || Sbjct 12550802 TCACATGTTAATCGTAGTTGGTGTATTCGGTGGTTCCTTATTTAGTGTTATGAATGGTTC 12550861 Query 19892 TTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGCTA 19951 ||||| || | | |||| || ||| || || ||| ||| || | || || Sbjct 12550862 CTTGGTAACCTTTAGTTTGATCAGGGCAACCACAGAAAATGAATCTACTAATGAAGGTTA 12550921 Query 19952 TAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAG 20011 | ||| | ||| | ||||| || ||||||||||| |||| || || || ||||| | Sbjct 12550922 CAGATTCAGTCAAAAAGAAGAAACTTATAATATTGTAACTGCTCATGGTTATTTTGGCCG 12550981 Query 20012 ATTGATATTTCAATATGCTTCTTTCAATAATT 20043 |||| | || ||||||||| |||||| |||| Sbjct 12550982 ATTGTTTTTCCAATATGCTAGTTTCAACAATT 12551013 Score = 95.1 bits (104), Expect = 3e-15 Identities = 142/202 (70%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 || ||| | ||| | || || || || ||||| ||||| | || |||||||| || | Sbjct 15728431 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 15728490 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| |||| | | || ||| | ||||| ||||||| || || | || Sbjct 15728491 ATGATACCTACCTTATTGACCGCAACTTTTGTATTTATTATCGCCTTCATTGCTACTCCT 15728550 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || |||||||| |||| || ||||| || ||||| | || | | ||| |||||||| Sbjct 15728551 CCAGTAGATATTGATGATATTCGTGAACCTGTTTCTAGATCTCCACTTTACAGAAACAAT 15728610 Query 19470 ATTATTTCTGGAGCAGTAGTTC 19491 ||||||| ||| || | |||| Sbjct 15728611 ATTATTTTTGGTGCCATTGTTC 15728632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144439826437704