Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6 109 5e-19 seq4 107 2e-18 seq511 104 2e-17 seq11 104 2e-17 seq9 104 2e-17 seq7 102 7e-17 seq12 98.7 9e-16 seq2 98.7 9e-16 seq8 91.5 1e-13 >seq6 Length=51074515 Score = 109 bits (120), Expect = 5e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| ||||| || || | || ||| ||||||||||| | Sbjct 42745202 ATGCAAATCTTTGTCAAAACCTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGTTCC 42745261 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| ||||| |||||||| || || || ||| Sbjct 42745262 GACACCATCGACAACGTTAAGGCCAAGATTCAAGACAAGGAAGGCATCCCACCTGACCAA 42745321 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || ||||| ||| | ||||||| || | | | |||||||| Sbjct 42745322 CAGCGTTTGATCTTCGCTGGCAAACAATTGGAAGATGGGAGGACCTTGGCTGATTATAAT 42745381 Query 24171 ATTCAAAAAGAATCTACAATTCA 24193 || ||||| ||||| || |||| Sbjct 42745382 ATCCAAAAGGAATCCACCCTTCA 42745404 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044 || || ||||| | ||||| ||||| | || || || | || || |||| ||||| Sbjct 42744968 AAGAAGATGCAGATCTTTGTGAAAACCCTTACCGGCAAGACCATAACACTCGAGGTCGAA 42745027 Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104 | |||||||||||| | ||||| ||||| ||||| ||||| || || ||| Sbjct 42745028 AGCTCCGACACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGAAGGGATCCCACCC 42745087 Query 24105 GATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGAT 24164 || || ||| | || |||| || ||||| || |||||||| | | | | | |||| Sbjct 42745088 GACCAGCAGCGTCTCATTTTCGCTGGCAAACAGCTCGAAGACGGTCGGACCCTTGCCGAT 42745147 Query 24165 TATAACATTCAAAAAGAATCTAC 24187 |||||||| || |||||||| || Sbjct 42745148 TATAACATCCAGAAAGAATCCAC 42745170 Score = 82.4 bits (90), Expect = 7e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || || || || ||| | || ||| | || || || | | Sbjct 42745430 ATGCAGATTTTTGTCAAGACTTTGACCGGCAAAACAATCACCTTGGAGGTTGAAAGCTCC 42745489 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || ||||||| || || ||||| || || || ||||| Sbjct 42745490 GATACCATTGACAATGTTAAGGCAAAGATTCAGGATAAGGAAGGAATCCCACCTGATCAG 42745549 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 || || || || | | |||||| ||| | ||||||| || | | | || |||||||| Sbjct 42745550 CAAAGGCTCATCTTTGCCGGCAAACAATTGGAAGATGGGAGGA-CTTTGGCTGATTATAA 42745608 Query 24170 CATTCAAAAAGAATCTACAATTCA 24193 |||||| ||||| ||||| |||| Sbjct 42745609 CATTCAGAAAGAGTCTACCCTTCA 42745632 >seq4 Length=62178258 Score = 107 bits (118), Expect = 2e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23979 TAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAA 24038 |||||| | |||||| | || || ||||| |||| || || | || ||| | || Sbjct 4510533 TAGCCACTAAGAATGCAGATCTTCGTGAAAACCCTAACCGGGAAGACCATAACCCTAGAG 4510592 Query 24039 GTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATA 24098 |||||| | |||||| ||||| | |||||| ||||| ||||||||||||||| Sbjct 4510593 GTCGAGTCTTCCGACACAATCGATAATGTCAAAGCCAAGATCCAAGACAAAGAAGGCATA 4510652 Query 24099 CCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTC 24158 || || || ||||| | || || | || ||| |||||||||||||| | | | | | | Sbjct 4510653 CCCCCGGACCAACAACGCCTCATCTTCGCCGGTAAGCAACTCGAAGACGGCCGCACCTTA 4510712 Query 24159 AGCGATTATAACATTCAAAAAGAATCTAC 24187 ||| || ||||| ||||| ||||| || Sbjct 4510713 GCCGACTACAACATCCAAAAGGAATCCAC 4510741 >seq511 Length=6087 Score = 104 bits (114), Expect = 2e-17 Identities = 106/136 (78%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 || ||||||||||| ||||| ||||| ||||| |||||| | || |||||||| ||| Sbjct 348 GATAAAGAAGGCATCCCTCCTGATCAGCAGAGGTTGATTTTTGCTGGTAAGCAACTGGAA 407 Query 24144 GATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||| | ||| | | ||| ||||||||||| ||||| || || || |||| ||||||| Sbjct 408 GATGGCCGAACCCT-AGCTGATTATAACATCCAAAAGGAGTCCACTCTTCACCTAGTGTT 466 Query 24203 AAGATTGAGAGGAGGA 24218 ||| | || |||||| Sbjct 467 AAGGCTTAGGGGAGGA 482 Score = 98.7 bits (108), Expect = 9e-16 Identities = 105/136 (77%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 || ||||| ||||| ||||| ||||| ||||| |||||| | || |||||||| ||| Sbjct 5624 GATAAAGAGGGCATCCCTCCTGATCAGCAGAGGTTGATTTTTGCTGGTAAGCAACTAGAA 5683 Query 24144 GATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||| | ||| | | ||| ||||||||||| ||||| || || || |||| |||| || Sbjct 5684 GATGGCCGAACCCT-AGCTGATTATAACATCCAAAAGGAGTCCACTCTTCACCTAGTTTT 5742 Query 24203 AAGATTGAGAGGAGGA 24218 ||| | ||||||||| Sbjct 5743 AAGGCTTAGAGGAGGA 5758 >seq11 Length=62681010 Score = 104 bits (114), Expect = 2e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || ||||| |||| || ||| | || ||| | || |||||| | Sbjct 3843015 CAAGATGCAGATCTTCGTCAAAACCCTAACGGGGAAAACCATAACCCTTGAGGTCGAGTC 3842956 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 |||||||||||| | |||||| ||||| ||||| |||||||| |||||||| Sbjct 3842955 TTCCGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGA 3842896 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| | || || | || ||| ||||| || ||||| | | | | | | ||| || Sbjct 3842895 TCAACAACGCCTTATCTTCGCCGGGAAGCAGCTTGAAGACGGCCGCACCTTAGCCGACTA 3842836 Query 24167 TAACATTCAAAAAGAATCTACAATTCA 24193 || || || || ||||| || |||| Sbjct 3842835 CAATATCCAGAAGGAATCCACTCTTCA 3842809 Score = 98.7 bits (108), Expect = 9e-16 Identities = 150/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 23974 CTTTTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCA 24033 || ||||||||||||| ||||| | || || || || |||| || || |||| || Sbjct 1164152 CTATTTAGCCAAACAAGATGCAGATCTTCGTTAAGACTCTAACCGGCAAGACGATCACAC 1164093 Query 24034 TCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAG 24093 |||| |||||| | |||||| ||||| | || || || || || || |||| Sbjct 1164092 TCGAGGTCGAGAGCTCCGACACGATCGACAACGTGAAGGCCAAAATCCAAGATAAGGAAG 1164033 Query 24094 GCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA 24153 |||| ||||| || || ||| | ||||| | || ||| || || |||||||| | | | | Sbjct 1164032 GCATCCCTCCAGACCAGCAGCGTCTGATCTTCGCCGGAAAACAGCTCGAAGACGGCCGGA 1163973 Query 24154 ACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 | | |||||| ||||| ||||| || || || Sbjct 1163972 CCTTGGCCGATTACAACATCCAAAAGGAGTCAAC 1163939 >seq9 Length=70713020 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| ||||| || || | || ||| ||||||||||| | | Sbjct 65273638 ATGCAGATCTTCGTCAAAACCTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTCC 65273697 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| || || ||||| |||||||| || || || || Sbjct 65273698 GACACCATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGCATCCCACCAGACCAG 65273757 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || |||||| || |||||||||| | | | | | ||||||||| Sbjct 65273758 CAGCGTCTCATCTTCGCCGGCAAACAGCTCGAAGATGGCCGTACCCTGGCCGATTATAAT 65273817 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || ||||| || Sbjct 65273818 ATCCAGAAGGAATCCAC 65273834 Score = 93.3 bits (102), Expect = 4e-14 Identities = 142/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | ||||| || | || ||| | || || ||| | | Sbjct 66882265 ATGCAGATCTTTGTAAAAACCCTTACTGGTAAGACCATCACCCTTGAGGTGGAGAGCTCC 66882206 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || ||||| | ||||| ||||| ||||| ||||| || || || ||||| Sbjct 66882205 GATACTATCGATAATGTCAAGGCCAAGATCCAAGACAAGGAAGGGATTCCACCAGATCAG 66882146 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACA-GAAACGT-CAGCGATTATA 24168 ||||| |||||| | ||| || ||||||||||||| | || || | || ||||| | Sbjct 66882145 CAGAGGTTGATTTTTGCCGGAAAACAACTCGAAGATGGTAGGACACTTGCA--GATTACA 66882088 Query 24169 ACATTCAAAAAGAATCTAC 24187 |||| || ||||| ||||| Sbjct 66882087 ACATCCAGAAAGAGTCTAC 66882069 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| ||||| || || | || ||| ||||||||||| | | Sbjct 65273182 ATGCAGATCTTCGTCAAAACCTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTCC 65273241 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || || ||| ||||| |||||||| || || || || Sbjct 65273242 GACACCATCGATAATGTGAAGTCTAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAG 65273301 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || ||| || || ||||| || | | | | | | |||||| ||| Sbjct 65273302 CAGCGTCTTATCTTCGCCGGAAAACAGCTCGAGGACGGCCGTACCTTGGCCGATTACAAC 65273361 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || ||||| || Sbjct 65273362 ATCCAGAAGGAATCCAC 65273378 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| ||||| || || | || ||| ||||||||||| | Sbjct 65273410 ATGCAGATCTTCGTCAAAACTTTAACCGGCAAGACCATCACCCTCGAAGTCGAGAGCTCT 65273469 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || || ||| ||||| |||||||| || || || || Sbjct 65273470 GACACCATCGATAATGTAAAGTCTAAAATTCAAGACAAGGAAGGCATCCCACCAGACCAG 65273529 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || |||||| || ||||| || | | | | | | |||||| ||| Sbjct 65273530 CAGCGTCTCATCTTCGCCGGCAAACAGCTCGAGGACGGCCGTACCTTGGCCGATTACAAC 65273589 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || ||||| || Sbjct 65273590 ATCCAGAAGGAATCCAC 65273606 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | || |||||| | || || | || || ||| Sbjct 66888419 ATGCAGATATTTGTAAAAACCCTCACCGGAAAAACCATCACTTTGGAGGTGGAGAGTTCT 66888360 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || || |||||| ||||| || || || || || ||||| Sbjct 66888359 GATACCATTGATAATGTTAAGGCCAAGATTCAGGACAAGGAGGGTATTCCACCAGATCAG 66888300 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCG-ATTATAA 24169 ||||| ||||||| | ||| ||||| ||||| |||| || | | |||| ||||||| Sbjct 66888299 CAGAGGCTGATTTTTGCCGGAAAGCAGCTCGAGGATGGGAGGACACT-AGCGGATTATAA 66888241 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 ||| ||||| || || || | ||||| ||| | || || | || ||| Sbjct 66888240 CATCCAAAAGGAGTCAACCCTGCATTTGGTGCTGCGACTGCGTGGTGGA 66888192 >seq7 Length=60982465 Score = 102 bits (112), Expect = 7e-17 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | || || ||||| |||| || || | || ||| | || |||||| | Sbjct 9403748 CAAGATGCAGATCTTCGTCAAAACCCTAACGGGGAAGACTATAACCCTAGAGGTCGAGTC 9403807 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 ||||||||| || | |||||| ||||| ||||| |||||||| || || || Sbjct 9403808 TTCCGACACCATTGACAATGTCAAAGCTAAGATCCAAGACAAGGAAGGCATTCCACCTGA 9403867 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||| | || || | || |||||||||||||||||||| | | | | | ||| || Sbjct 9403868 CCAACAACGTCTTATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACCTTAGCCGACTA 9403927 Query 24167 TAACATTCAAAAAGAATCTAC 24187 ||||| || || ||||| || Sbjct 9403928 CAACATCCAGAAGGAATCCAC 9403948 >seq12 Length=35429946 Score = 98.7 bits (108), Expect = 9e-16 Identities = 105/136 (77%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 || ||||| ||||| ||||| ||||| ||||| |||||| | || |||||||| ||| Sbjct 4807309 GATAAAGAGGGCATCCCTCCTGATCAGCAGAGGTTGATTTTTGCTGGTAAGCAACTAGAA 4807250 Query 24144 GATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||| | ||| | | ||| ||||||||||| ||||| || || || |||| ||||||| Sbjct 4807249 GATGGCCGAACCCT-AGCTGATTATAACATCCAAAAGGAGTCCACTCTTCACCTAGTGTT 4807191 Query 24203 AAGATTGAGAGGAGGA 24218 ||| | || |||||| Sbjct 4807190 AAGGCTTAGGGGAGGA 4807175 >seq2 Length=62769430 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | |||||||| | || ||| | || |||||| Sbjct 27609460 ATGCAAATCTTTGTCAAAACTCTCACTGGAAAGACAATCACCTTGGAGGTCGAGAGTTCG 27609519 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || ||||| || | || ||| |||||| ||||||||||| || || || || ||| Sbjct 27609520 GATACCATTGATAATGTGAAAGCCAAGATTCAGGACAAAGAAGGAATCCCACCAGACCAA 27609579 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || ||| |||||| | || || ||||| ||||||| |||| | ||||||||| Sbjct 27609580 CAAAGATTGATTTTTGCTGGAAAACAACTTGAAGATGGAAGAACTCTTGCCGATTATAAT 27609639 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 || || || || ||||| | ||||| || Sbjct 27609640 ATCCAGAAGGAGTCTACTCTCCATTTGGT 27609668 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | || || || | || ||| |||| || || | Sbjct 10549393 ATGCAAATCTTTGTTAAGACCCTCACCGGCAAGACTATCACCCTCGAGGTGGAAAGCTCG 10549452 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| ||||| ||||||||||| || ||||| || || Sbjct 10549453 GACACCATTGATAATGTCAAGGCCAAGATCCAAGACAAAGAAGGGATCCCTCCAGACCAG 10549512 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 |||||||| || | | ||| |||||||| ||||||| | | | | | ||||| ||| Sbjct 10549513 CAGAGACTTATCTTTGCCGGTAAGCAACTAGAAGATGGCCGTACCCTGGCTGATTACAAC 10549572 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || ||||| || || || | ||||| ||| Sbjct 10549573 ATCCAAAAGGAGTCCACCCTCCATTTGGTG 10549602 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||||||||| | ||||||||| | || || | || || ||| Sbjct 10571890 ATGCAGATCTTTGTAAAAACGCTCACTGGAAAAACCATCACTTTAGAGGTGGAGAGTTCT 10571949 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || || || || | || || |||||| ||||| || ||||| || || || || Sbjct 10571950 GATACAATTGATAACGTTAAGGCCAAGATTCAGGACAAGGAGGGCATCCCACCAGACCAG 10572009 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| | |||| | || || || || ||||||| ||||| | | || |||||| Sbjct 10572010 CAGAGGTTAATTTTTGCTGGGAAACAGCTTGAAGATGGCAGAACCCTTGCAGACTATAAC 10572069 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||||||| || ||||| | ||||| ||||| Sbjct 10572070 ATTCAAAAGGAGTCTACCCTCCATTTGGTGTT 10572101 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | || || ||| | || ||| | ||||| ||| | | Sbjct 10550077 ATGCAGATTTTTGTGAAGACTCTTACCGGGAAAACCATCACCTTGGAAGTTGAGAGCTCC 10550136 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| || || ||||| ||||| || ||||| || ||| Sbjct 10550137 GACACTATTGACAATGTCAAGGCCAAAATCCAGGACAAGGAAGGTATCCCTCCAGACCAA 10550196 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA-ACGTCAGC-GATTATA 24168 ||||| |||||| || || ||||| || || |||| ||| | || | || || || | Sbjct 10550197 CAGAGGTTGATTTTCGCGGGTAAGCAGCTTGAGGATGGCAGGACACTT--GCAGACTACA 10550254 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||||| || || || | ||||| || Sbjct 10550255 ACATTCAAAAGGAGTCGACCCTCCATTTGGT 10550285 >seq8 Length=57128820 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 || |||||| | || || ||||| |||| || || | || ||| | || || ||| | Sbjct 38526143 AAGATGCAAATCTTCGTCAAAACCCTAACGGGGAAGACCATAACCCTAGAGGTTGAGTCT 38526202 Query 24048 AACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGAT 24107 |||||||||||| | |||||| ||||| ||||| || ||||| || ||||| Sbjct 38526203 TCCGACACCATCGACAATGTCAAAGCCAAGATCCAAGACAAGGAGGGCATCCCACCCGAC 38526262 Query 24108 CAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTAT 24167 |||||| | || || | | ||||||||| ||||| || | | | | | | ||| || Sbjct 38526263 CAACAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCTTAGCCGACTAC 38526322 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || || ||||| || | ||| | ||| Sbjct 38526323 AACATCCAGAAGGAATCCACCCTCCATCTCGTG 38526355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429930582000270