Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq11 143 3e-29 seq2 138 1e-27 seq9 131 2e-25 seq10 123 2e-23 seq4 114 1e-20 seq8 111 1e-19 seq13 98.7 9e-16 seq6 96.9 3e-15 >seq11 Length=62681010 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||||||| || || | || | || ||||||||||| |||||||||||| | Sbjct 1163909 CCACCGCGCAAACGGAGGACGAGGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGCC 1163968 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || ||||| || || ||| |||| | |||||||||||| |||||| Sbjct 1163969 AAGGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGG 1164028 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || |||||| ||| | | || | || |||| | ||||| Sbjct 1164029 ATGCCTTCCTTATCTTGGATTTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTCTCGACC 1164088 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||||||||| || ||||| |||||||| Sbjct 1164089 TCGAGTGTGATCGTCTTGCCGGTTAGAGTCTTAACGAAGATCTGCAT 1164135 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||||||||| || || | || | || |||||||| || |||||||| ||| | Sbjct 1163681 CCGCCGCGCAAACGAAGGACAAGGTGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCC 1163740 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||| || || || || || ||| |||| | ||| |||||||| || ||| Sbjct 1163741 AAGGTACGGCCGTCTTCGAGTTGTTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGGGGG 1163800 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| ||| ||| | | || | || |||| | ||||| Sbjct 1163801 ATGCCTTCCTTGTCTTGGATCTTCGCCTTAACGTTGTCGATCGTGTCGGAGCTCTCGACC 1163860 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| | ||||| ||||| || ||||| Sbjct 1163861 TCGAGAGTGATTGTCTTGCCGGTCAAGGTTTTCACGAAGATTTGCAT 1163907 >seq2 Length=62769430 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || ||||| | |||||||||||||||||||||||| || Sbjct 10550303 CCACCACGAAGACGAAGAACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCA 10550244 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | || | ||||| |||||||| || ||| | || || | ||| ||||| ||||| Sbjct 10550243 AGTGTCCTGCCA-TCCTCAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGG 10550185 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| |||||| ||||| | || | ||| |||| | ||| | Sbjct 10550184 GATACCTTCCTTGTCCTGGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAAC 10550125 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | |||||| ||||| ||||| || || ||||||||||| Sbjct 10550124 TTCCAAGGTGATGGTTTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 10550077 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | |||||| || || || || | ||| |||||||| ||||||||||| || Sbjct 10549391 CCACCCCTCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 10549332 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||||||||||| || || |||| | | ||| || || || ||| Sbjct 10549331 AGTGTACGACCATCCTCTAGCTGCTTACCAGCAAAGATAAGCCTCTGTTGATCTGGTGGG 10549272 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||||||||| || ||| || ||||| | || | || |||| | || | Sbjct 10549271 ATTCCTTCTTTATCTTGGATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACC 10549212 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || |||||||| ||||| Sbjct 10549211 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 10549165 Score = 104 bits (114), Expect = 2e-17 Identities = 152/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| ||||| | ||| ||||||||||| ||||||||||| || ||| || Sbjct 10549607 CGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCCAGGGTACGGCCA 10549548 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || ||||| ||||| || || |||| | | ||||||||| |||||||| ||||||||| Sbjct 10549547 TCTTCTAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGGATCCCTTCTTTG 10549488 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||||| | || | || || | | || | |||| ||| | Sbjct 10549487 TCTTGGATCTTGGCCTTGACATTATCAATGGTGTCCGAGCTTTCCACCTCGAGGGTGATA 10549428 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| || || || || || || ||||| Sbjct 10549427 GTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 10549393 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| || || | || | ||| ||||||||||| |||||||| || Sbjct 10571433 GCCACCCCTGAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGC 10571374 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || ||||| ||||| || || ||| |||| | | ||| ||||| || || Sbjct 10571373 AAGGGTACGGCCATCCTCAAGCTGTTTCCCGGCGAAGATAAGCCTCTGTTGGTCAGGGGG 10571314 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| || ||||| | || | || |||| | || | Sbjct 10571313 GATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTGTCGGAGCTTTCCAC 10571254 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| ||||| || |||||||| || || |||||||| Sbjct 10571253 CTCGAGGGTGATGGTCTTACCAGTAAGAGTTTTCACAAAGATCTGCAT 10571206 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| ||| ||||| | ||| ||||||||||||||||| || || Sbjct 10572116 CCACCACGAAGACGCAACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGCA 10572057 Query 131068 ATGGTGC-GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| | || | || || ||||| || || || | ||||| | ||||||||| || || Sbjct 10572056 AGGGTTCTGCCA-TCTTCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGG 10571998 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || || ||| | | || | ||||| | ||| | Sbjct 10571997 GATGCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTATCAATTGTATCAGAACTCTCCAC 10571938 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | |||||| || || || |||||||| || ||||||||| Sbjct 10571937 CTCTAAAGTGATGGTTTTTCCAGTGAGCGTTTTTACAAAGATCTGCATG 10571889 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| ||||| | ||| || |||||||| ||||||||||| Sbjct 10550075 CCACCACGAAGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGCG 10550016 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || || ||||| || || |||| || | ||| ||||| || || Sbjct 10550015 AGAGTGCGGCCATCTTCAAGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGGGGA 10549956 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | ||||| | ||| | Sbjct 10549955 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACC 10549896 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || ||||| ||||| || || || || ||||| Sbjct 10549895 TCCAAAGTAATGGTCTTTCCGGTAAGAGTCTTCACAAATATTTGCAT 10549849 Score = 89.7 bits (98), Expect = 5e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| ||||| | || | ||| ||||| |||||||||||||| || Sbjct 10571661 GCCACCCCTGAGACGAAGCACAAGGTGGAGGGTAGACTCTTTTTGAATGTTGTAGTCAGC 10571602 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || || ||||| || || |||| | | ||| ||||| || || Sbjct 10571601 AAGGGTGCGACCATCTTCAAGTTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCAGGGGG 10571542 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| |||||||| || ||| || ||||| | || | || || | | || | Sbjct 10571541 GATCCCTTCTTTATCCTGGATCTTAGCCTTGACATTATCAATTGTGTCAGAGCTTTCAAC 10571482 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || || || || ||||||||||| ||||||||| Sbjct 10571481 CTCAAGGGTGATTGTCTTGCCAGTAAGGGTTTTTACGAAGATCTGCATG 10571433 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||| ||| || || | ||| ||||||||||| || ||||| ||| | Sbjct 27609914 CCACCACGCAGCCGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCC 27609855 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || | || || ||||||||||| || |||| | | |||||||| || ||| Sbjct 27609854 AATGTCCTACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGG 27609795 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | ||||||| || | Sbjct 27609794 ATACCCTCCTTGTCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACC 27609735 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| || ||||| ||||| ||||| || |||||||| Sbjct 27609734 TCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 27609688 >seq9 Length=70713020 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| || ||||| || |||||||||||| | Sbjct 65273636 CCCCCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC 65273577 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||| ||||| ||| |||| | |||||||||||| || ||| Sbjct 65273576 AAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGG 65273517 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||||| ||| | | || | || || | | ||||| Sbjct 65273516 ATGCCTTCCTTGTCTTGAATTTTAGACTTTACATTATCGATGGTGTCAGAGCTCTCGACT 65273457 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||||| |||||| ||||| |||||||| Sbjct 65273456 TCGAGGGTGATGGTCTTGCCGGTTAAAGTTTTGACGAAGATCTGCAT 65273410 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || ||||| | ||| || || | || | ||| || ||||| || || || |||||| | Sbjct 65273864 CCCCCGCGAAGACGGAGGACGAGGTGGAGGGTGGATTCCTTCTGGATATTATAATCGGCC 65273805 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || || || ||||| ||||| ||| |||| | |||||||||||| || ||| Sbjct 65273804 AGGGTACGGCCATCTTCGAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGG 65273745 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| ||||| | || | || |||| | ||||| Sbjct 65273744 ATGCCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATGGTGTCGGAGCTCTCGACT 65273685 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||||| ||||| ||||| |||||||| Sbjct 65273684 TCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACGAAGATCTGCAT 65273638 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| || ||||| || |||||||||||| || ||| || |||||| ||||| || || Sbjct 65273379 GGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCC 65273320 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | |||||||||||| || ||||| ||||| ||||| ||||| ||| Sbjct 65273319 GGCGAAGATAAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTT 65273260 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 | | || | || |||| | ||||| |||| ||| | ||| || ||||||| || Sbjct 65273259 CACATTATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGT 65273200 Query 131217 TTTTACGAAAATCTGCAT 131234 ||| ||||| |||||||| Sbjct 65273199 TTTGACGAAGATCTGCAT 65273182 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | || | ||| || ||||| || |||||||||||| | Sbjct 65273180 CCCCCACGAAGACGGAGGACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAATCGGCC 65273121 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||| || || ||| |||| | |||||||||||| || ||| Sbjct 65273120 AAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGG 65273061 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||||| ||| | | || | || || | ||| | Sbjct 65273060 ATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTGTCGATGGTGTCAGAACTCTCAACC 65273001 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| || ||||| ||||| |||||||| Sbjct 65273000 TCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAGATCTGCAT 65272954 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| | ||| ||||| | |||||| ||||| |||||||| || || | Sbjct 66881810 GCCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTC-CG 66881868 Query 131067 CATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 || | || || || || |||||||| || || | || || | |||||||||||| | Sbjct 66881869 CAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTG 66881928 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| ||||| || || || || ||| | | || | ||||| | ||| | Sbjct 66881929 GGATCCCTTCCTTATCCTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCA 66881988 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||| ||||| || |||||||| ||||||||||| Sbjct 66881989 CCTCCAACGTAATAGTTTTTCCGGTGAGGGTTTTTACAAAAATCTGCAT 66882037 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| || |||| ||| | ||| ||||||||||| || ||||| ||| Sbjct 66882494 GCCACCCCTTAGACGAAGGACTAGATGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGC 66882553 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||||| || || || || || |||| | | |||||||| ||||| Sbjct 66882554 AAGAGTTCGGCCATCCTCGAGTTGTTTTCCGGCAAAGATAAGCCTTTGCTGGTCAGGAGG 66882613 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||||||||| |||||| ||||| | || | |||||| | || | Sbjct 66882614 GATCCCTTCTTTGTCTTGGATTTTAGCCTTGACATTATCGATAGTATCAGAACTTTCTAC 66882673 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| ||||| || || ||||| || || |||||||| Sbjct 66882674 CTCAAGGGTGATGGTCTTACCAGTAAGGGTTTTCACAAAGATCTGCAT 66882721 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| || |||| || | ||| ||||||||||| |||||||| ||| Sbjct 66888648 GCCACCCCTTAGACGAAGGACTAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGC 66888707 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || ||||| || || || || || |||| | | || ||||| ||||| Sbjct 66888708 AAGAGTTCGGCCATCCTCAAGTTGTTTTCCGGCAAAGATAAGCCTTTGTTGGTCTGGAGG 66888767 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| |||||| ||||| | || | |||||||| | || | Sbjct 66888768 AATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTATCGATAGTATCGGAGCTTTCTAC 66888827 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| ||||| || || ||||| || || || ||||| Sbjct 66888828 CTCAAGGGTGATGGTCTTACCAGTAAGGGTTTTCACAAAGATTTGCAT 66888875 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || ||||| | |||||| |||||||| ||||| || || | || | | ||||| Sbjct 66881373 ACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCCTCA 66881432 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 |||||||| || || | || || | ||||||||| ||||| || || || ||||| Sbjct 66881433 AGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGA 66881492 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 |||||| |||| | || | || || | | ||||| || | ||| | ||||||| Sbjct 66881493 ATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAGGGTGATGGTTTTA 66881552 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| | || || ||||| |||||||| Sbjct 66881553 CCGGTCAAGGTCTTCACGAATATCTGCAT 66881581 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAAT-CGCT 131066 ||||| |||| |||||||| ||||| | ||| ||||||||||| ||||| |||| |||| Sbjct 66888193 CCACCACGCAGTCGCAGCACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCT 66888252 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || | | ||||| |||||||| || || | || | | |||||| || || || Sbjct 66888253 -AGTGTCCTCCCATCCTCGAGCTGCTTTCCGGCAAAAATCAGCCTCTGCTGATCTGGTGG 66888311 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || || ||| | | || | ||||| | ||| | Sbjct 66888312 AATACCCTCCTTGTCCTGAATCTTGGCCTTAACATTATCAATGGTATCAGAACTCTCCAC 66888371 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | |||||| ||||| || |||||||| || |||||||| Sbjct 66888372 CTCCAAAGTGATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 66888419 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| | | ||| || || | || | ||| ||||| || || ||||||||||| | | Sbjct 66882267 CCACCCCTAAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAATC-CGC 66882325 Query 131068 ATG-GTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | | || || || || ||||| || || || |||| | | ||| ||||| || || Sbjct 66882326 AAGAGTTCGGCCATCTTCAAGCTGTTTACCGGCAAAGATAAGCCTCTGTTGGTCTGGTGG 66882385 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||| || ||||| | || | ||||||| || | Sbjct 66882386 GATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTATCGGAACTTTCCAC 66882445 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | || || || || |||||||| ||||| ||||||||| Sbjct 66882446 CTCGAGGGTGATAGTCTTGCCAGTAAGAGTTTTCACGAATATCTGCATG 66882494 >seq10 Length=62175169 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || | ||| | ||| |||||||| || |||||||||||| Sbjct 51860904 GCCACCACGTAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGC 51860845 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| || || || ||||| || || ||| |||| | ||| || ||||| || || Sbjct 51860844 CAAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGG 51860785 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| ||||||| ||| | | || | || |||| ||||| Sbjct 51860784 GATCCCTTCCTTGTCTTGGATTTTCGCCTTAACGTTGTCGATCGTGTCGGAACTCTCGAC 51860725 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| || || || ||||| |||||||| Sbjct 51860724 TTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 51860677 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | | || || ||||| | |||||||||||| || |||||||||||| | Sbjct 51861131 CCACCACGAAGCCTCAATACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGCC 51861072 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| || || || || || |||| | | |||||||| || ||| Sbjct 51861071 AAGGTGCGACCGTCCTCGAGTTGTTTCCCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 51861012 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| ||| || ||||| | || | || || | | |||| Sbjct 51861011 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACT 51860952 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | ||| || ||||| || ||||| ||||| ||||||||| Sbjct 51860951 TCCAAAGTTATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCATG 51860904 >seq4 Length=62178258 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| | | ||| || || | || | || || |||||||| |||||||| ||| Sbjct 4510772 GCCACCCCTGAGACGGAGAACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGC 4510713 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||| || || ||||| || ||| |||| | || || |||||||| || Sbjct 4510712 TAAGGTGCGGCCGTCTTCGAGTTGCTTACCGGCGAAGATGAGGCGTTGTTGGTCCGGGGG 4510653 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || ||||||||||| ||| || |||| | || | || |||| ||||||| Sbjct 4510652 TATGCCTTCTTTGTCTTGGATCTTGGCTTTGACATTATCGATTGTGTCGGAAGACTCGAC 4510593 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || |||||||| ||||| ||||| |||||||| Sbjct 4510592 CTCTAGGGTTATGGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCAT 4510545 >seq8 Length=57128820 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 131019 ACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGA 131078 ||| ||||| | ||| | ||| || ||||| || |||||||| ||| | |||||| Sbjct 38526361 ACGGAGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCC 38526302 Query 131079 GTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTT 131138 |||||| ||||||||||| || |||| | ||||| ||||| || ||||| || || || Sbjct 38526301 GTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGGATGCCCTCCTT 38526242 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| ||| || |||| | || | || |||| ||||| | || | ||| | Sbjct 38526241 GTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTAT 38526182 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || ||||| ||||| ||||| || ||||| Sbjct 38526181 GGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCAT 38526146 >seq13 Length=58321163 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || || || | ||| |||||||| || ||||||||||| Sbjct 44436950 CCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 44437009 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| | | |||||||||||||| || || | || | | ||||||||| |||||| Sbjct 44437010 AGGGTCCTCCCATCCTCTAGCTGCTTTCCAGCAAATATCAGCCTCTGCTGGTCTGGAGGG 44437069 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||||| ||| | | || | || || | | ||| | Sbjct 44437070 ATACCTTCCTTATCTTGAATTTTGGCCTTAACATTATCGATTGTGTCAGAGCTCTCAACT 44437129 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || ||||| || || || || ||||||||||| Sbjct 44437130 TCCAGGGTGATGGTCTTCCCGGTAAGTGTCTTCACAAAAATCTGCAT 44437176 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| || || | || |||||||| || ||||||||||| || ||||| Sbjct 44437418 CGAAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCCAATGTGCGGCCA 44437477 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| || ||||| || ||| |||| | | |||||||| || ||||| ||||| ||| Sbjct 44437478 TCCTCAAGTTGCTTACCAGCGAAGATCAGCCTTTGCTGGTCTGGGGGGATGCCTTCCTTG 44437537 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || || || ||||| | || | ||||| | ||| | || | || | | Sbjct 44437538 TCCTGAATCTTGGCCTTGACATTGTCAATCGTATCAGAACTCTCCACCTCCAATGTGATG 44437597 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || || ||||| || || || || ||||| ||||| Sbjct 44437598 GTCTTTCCGGTGAGGGTCTTGACAAAAATTTGCAT 44437632 >seq6 Length=51074515 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| || || || || ||||| |||||| | ||| || ||| || ||||| ||||| Sbjct 42745171 GGTGGATTCTTTCTGGATGTTATAATCGGCAAGGGTCCGACCGTCTTCGAGCTGTTTGCC 42745112 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| | || | |||||||||||| || ||||| ||||| ||||| ||| || ||| Sbjct 42745111 AGCGAAAATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTT 42745052 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | || |||| | |||| |||| || | ||| || ||||| || || Sbjct 42745051 GACGTTGTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGT 42744992 Query 131217 TTTTACGAAAATCTGCAT 131234 ||| || || |||||||| Sbjct 42744991 TTTCACAAAGATCTGCAT 42744974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006699234560