Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2 118 9e-22 seq6 100 2e-16 seq9 98.7 8e-16 seq8 93.3 3e-14 seq1 93.3 3e-14 seq10 91.5 1e-13 seq13 87.8 1e-12 seq4 87.8 1e-12 seq11 82.4 6e-11 >seq2 Length=62769430 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | || |||| ||| || || ||||||||||| ||||||||||| || Sbjct 10550304 CCCACCACGAAGACGAAGAACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGC 10550245 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || || | ||||| | || || ||||| |||| | || ||||||||| ||| Sbjct 10550244 AAGTGTCCTGCCATCCTCAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGG 10550185 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || || ||||| |||| ||| || | | | | ||||||| | ||| Sbjct 10550184 GATACCTTCCTTGTCCTGGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAAC 10550125 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| |||||||||||| ||||| || || || |||||||||||||| Sbjct 10550124 TTCCAAGGTGATGGTTTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 10550077 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||| || || ||||||||||| || | ||| | | ||||||| |||| Sbjct 10571864 TGGAGGGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGTTGT 10571805 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || ||| | ||||||| ||||||||| ||| | || |||||||| || || Sbjct 10571804 TTACCAGCAAAGATAAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGGATCTTG 10571745 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | |||||| | ||| ||| | |||||| || || || | Sbjct 10571744 GC--CTTGACATTATCAATTGTGTCGGAGCTTTCCACTTCAAGGGTGATTGTCTTGCCAG 10571687 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||||||||| || ||||| Sbjct 10571686 TAAGGGTTTTGACAAATATTTGCAT 10571662 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 ||||| || || | || |||| ||| || |||||||||||||| |||||||| || ||| Sbjct 10549619 CCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCC 10549560 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | ||| || || ||| | ||||| | ||| ||||| ||| Sbjct 10549559 AGGGTACGGCCATCTTCTAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGG 10549500 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGC--TC 16884 | || |||||||| || || || ||| || | | | |||| ||| || || Sbjct 10549499 ATCCCTTCTTTGTCTTGGATCTTGGC--CTTGACATTATCAATGGTGT--CCGAGCTTTC 10549444 Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || | |||||| || || ||||| || || || ||||| || ||||| Sbjct 10549443 CACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 10549393 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||||||||| ||||||||||| || | ||| | | ||||| | ||| Sbjct 10571408 TGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCAAGCTGT 10571349 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | ||||||| ||||||||| || | || || ||||| || || Sbjct 10571348 TTCCCGGCGAAGATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCCTTGTCTTGGATCTTG 10571289 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | |||||| | ||| || | ||||||||| || || | Sbjct 10571288 GC--CTTGACATTATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTACCAG 10571231 Query 16911 TCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| ||||| |||||||| Sbjct 10571230 TAAGAGTTTTCACAAAGATCTGCAT 10571206 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/230 (69%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || |||| || |||| || || || ||||||||||| || ||||||||||| Sbjct 27609915 CCCACCACGCAGCCGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGC 27609856 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || || | | || || | || ||||| ||| | || |||| || ||||| || Sbjct 27609855 CAATGTCCTACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGG 27609796 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| ||||| || ||||| |||||| | | | | || ||| || Sbjct 27609795 GATACCCTCCTTGTCTTGGATCTTTGC--CTTCACATTGTCAATGGTATCGGAACTTTCA 27609738 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||| |||||||| || || || ||||| |||||||| Sbjct 27609737 ACCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 27609688 >seq6 Length=51074515 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 |||||| || ||||||| || | || || ||||| |||||||| || || || || || Sbjct 42745429 CCCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGC 42745370 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 || ||| | | || |||||||||||||| || | || | ||||||||||| || Sbjct 42745369 CAAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGG 42745310 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | ||| || ||||| ||| | ||| || | | | | |||||| ||| Sbjct 42745309 GATGCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGAC 42745250 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | ||||||||| || ||||| | ||||||||||| || ||||| Sbjct 42745249 TTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 42745202 >seq9 Length=70713020 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||||||||| || | | |||| |||||| || || |||||||| ||||| ||||| || Sbjct 66881354 CCCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGC 66881413 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | | ||||| | || || || ||| |||| | || ||| ||||| ||| Sbjct 66881414 AAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGG 66881473 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC-CG 16886 | ||||| ||||| ||||| | || || | | | | ||||| || |||| || Sbjct 66881474 AATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTC--CGAGCTCTCG 66881531 Query 16887 TT-TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| |||||||||||| ||||||| || || || || |||||||| Sbjct 66881532 ACCTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 66881581 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||||||||| || | ||| |||| ||||| || ||||||||||| ||||| || || || Sbjct 66887964 CCCTCCTCGAAGGCGCAGAACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGC 66888023 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | || | | ||||| | ||| || || ||| |||| | || ||| ||||| || Sbjct 66888024 AAGCGTCCTCCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGG 66888083 Query 16828 CACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCC 16885 | ||||| ||||| || || || |||||| | | | ||||| |||| Sbjct 66888084 GATACCCTCCTTGTCTTGGATCTTGGC--CTTCACGTTATCAATTGTGTCTGAACTCTCC 66888141 Query 16886 GTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| || || |||||||| |||| ||||| ||||||||||||||| Sbjct 66888142 ACCTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 66888192 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||||||||| |||||||||||||| | ||| | | ||||| | |||| Sbjct 66888673 TGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCCTCAAGTTGT 66888732 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || ||| | ||||||| |||||||| ||| | || |||||||| |||| Sbjct 66888733 TTTCCGGCAAAGATAAGCCTTTGTTGGTCTGGAGGAATCCCTTCTTTGTCTTGGATTTTG 66888792 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | ||| ||| | || || | ||||||||| || || || Sbjct 66888793 GCCTTGACATTATCGATAGTATCGGAGCTTTCTACCTCAAGGGTGATGGTCTTACCAGTA 66888852 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || ||||| ||||| || ||||| Sbjct 66888853 AGGGTTTTCACAAAGATTTGCAT 66888875 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| ||||||||||| || || ||||||||||| | ||| | ||| Sbjct 66881142 AGGACAAGATGCAGTGTGGACTCCTTCTGGATATTGTAGTCGGCTAGAGTTCGACCATCC 66881201 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || || ||| | || | || ||| ||||| || | ||||| ||||| Sbjct 66881202 TCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCC 66881261 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | | ||||| | | | | ||||| | |||| |||| |||||| ||| Sbjct 66881262 TGAATCTTCGCTTTCACATTGTCGATCGTGTCTGAGCTCTCCACCTCCAGGGTGATTGTT 66881321 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||||| || || || || |||||||| Sbjct 66881322 TTCCCGGTCAAGGTCTTCACGAATATCTGCAT 66881353 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| ||||||||||| || || |||||||| || | ||| | ||| Sbjct 66887524 AGGACAAGATGCAGAGTGGACTCCTTCTGGATATTGTAGTCTGCTAAAGTTCGACCATCC 66887583 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 ||||| || || || ||| | || | || ||| ||||| ||| | ||||| ||||| Sbjct 66887584 TCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCC 66887643 Query 16844 GCAA--TTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| ||||| | | | | ||||| | |||| |||| |||||||| Sbjct 66887644 TGAATCTTAGCT--TTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGATGG 66887701 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || |||| || || || || |||||||| Sbjct 66887702 TTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 66887735 >seq8 Length=57128820 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/217 (70%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || ||||| ||||| || |||||||||||||| | ||| | ||||| Sbjct 38526357 AGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCC 38526298 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || ||||| ||| | || || ||||||||||| || | |||||| ||||| Sbjct 38526297 TCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCT 38526238 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || ||| || || | | | | |||||| | ||| || | ||| |||| Sbjct 38526237 TGGATCTTGGCT--TTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGG 38526180 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 | || || || || |||||||| || || ||||| || Sbjct 38526179 TCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 38526143 >seq1 Length=55868233 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/209 (70%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| ||||| || |||||||||||||| | ||| | |||| || | || Sbjct 19916783 TGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGCTGC 19916842 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | ||||| ||||||||||| || | |||||| ||||| || || Sbjct 19916843 TTCCCGGCGAAGATAAGGCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTG 19916902 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 || ||| || | | | | || ||| || ||| || | ||| ||||| || || | Sbjct 19916903 GC--CTTGACGTTGTCGATTGTATCGGAGGACTCAACCTCTAAGGTTATGGTCTTCCCCG 19916960 Query 16911 TCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| |||||||| || |||||||| ||| Sbjct 19916961 TCAGGGTTTTGACGAAGATCTGCATCTTG 19916989 >seq10 Length=62175169 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || || | ||| || ||||||||||| || |||||||| |||||| Sbjct 51860903 CCACCACGTAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCC 51860844 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | || || | ||||| || || | || || || |||||||| || Sbjct 51860843 AAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGG 51860784 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | || || ||||| |||| | ||| || | | | | |||||| ||| | Sbjct 51860783 ATCCCTTCCTTGTCTTGGATTTTCGCCTTAACGTTGTCGATCGTGTCGGAACTCTCGACT 51860724 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTT 16938 || | ||||||||| || |||||||| || || || || |||||||| || Sbjct 51860723 TCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCATCTT 51860674 >seq13 Length=58321163 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 16708 CCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGC 16767 ||| || || || | || |||| || || ||||||||||| || |||||||| || || Sbjct 44436949 CCCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGC 44437008 Query 16768 CATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGG 16827 | ||| | | ||||| | || || || ||| | || |||| ||| ||||| ||| Sbjct 44437009 AAGGGTCCTCCCATCCTCTAGCTGCTTTCCAGCAAATATCAGCCTCTGCTGGTCTGGAGG 44437068 Query 16828 CACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGT 16887 | || || || || ||||| ||| || | | | ||||| | ||| Sbjct 44437069 GATACCTTCCTTATCTTGAATTTTGGCCTTAACATTATCGATTGTGTCAGAGCTCTCAAC 44437128 Query 16888 TTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| ||||||||| || ||||| || || || |||||||||||||| Sbjct 44437129 TTCCAGGGTGATGGTCTTCCCGGTAAGTGTCTTCACAAAAATCTGCAT 44437176 >seq4 Length=62178258 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| |||||||| |||||||||||||| | ||| | |||| || | ||| Sbjct 4510747 TGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGTTGC 4510688 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 || || || | || || || ||||||||| || | ||| |||||||| || || Sbjct 4510687 TTACCGGCGAAGATGAGGCGTTGTTGGTCCGGGGGTATGCCTTCTTTGTCTTGGATCTTG 4510628 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | |||||| | ||| || | ||| ||||| || |||| Sbjct 4510627 GCT--TTGACATTATCGATTGTGTCGGAAGACTCGACCTCTAGGGTTATGGTCTTCCCGG 4510570 Query 16911 TCAGCGTTTTGACAAAAATCTGCATT 16936 | || ||||| || || ||||||||| Sbjct 4510569 TTAGGGTTTTCACGAAGATCTGCATT 4510544 >seq11 Length=62681010 Score = 82.4 bits (90), Expect = 6e-11 Identities = 143/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || ||||||||||| |||||||| ||||||| ||| | |||| || | ||| Sbjct 1163933 TGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGT 1163992 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 || || || | || || ||||| ||||| ||| | ||| || || || |||| Sbjct 1163993 TTTCCGGCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTG 1164052 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | | |||||| | ||| || | ||||| || || ||||| Sbjct 1164053 GCCTTCACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGTGTGATCGTCTTGCCGGTT 1164112 Query 16913 AGCGTTTTGACAAAAATCTGCATTTTGT 16940 || || || || || |||||||| |||| Sbjct 1164113 AGAGTCTTAACGAAGATCTGCATCTTGT 1164140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405082895131660