Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq10 123 2e-23 seq4 116 3e-21 seq6 114 1e-20 seq9 113 4e-20 seq7 113 4e-20 seq2 109 5e-19 seq11 98.7 8e-16 seq13 89.7 4e-13 >seq10 Length=62175169 Score = 123 bits (136), Expect = 2e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || ||||| || ||||| | || || || || || |||||||||||| Sbjct 51861134 ATCCCACCACGAAGCCTCAATACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCG 51861075 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || ||| || || |||||||| || || ||||||| | || ||||| || Sbjct 51861074 GCCAAGGTGCGACCGTCCTCGAGTTGTTTCCCGGCAAAGATGAGCCTTTGCTGGTCTGGT 51861015 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||||| || | | |||| |||||| | | |||| Sbjct 51861014 GGGATGCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCG 51860955 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || ||||||||||| ||||| || || ||||||||| Sbjct 51860954 ACTTCCAAAGTTATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCATG 51860904 Score = 107 bits (118), Expect = 2e-18 Identities = 170/240 (71%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || |||||||| | | || | ||| | || || || || || |||||||||||| Sbjct 51860906 ATGCCACCACGTAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAATCG 51860847 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || |||||| || ||||| || ||| |||||||||| |||||||| || Sbjct 51860846 GCCAAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGT 51860787 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTC 114331 || || ||||| ||||| || ||| | ||| | | || | ||||||| || Sbjct 51860786 GGGATCCCTTCCTTGTCTTGGAT-TTTCGCCTTAACGTTGTCGATCGTGTCGGAACTCTC 51860728 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCTTAATT 114391 ||| || | ||| | || ||||||||||| || || || || |||||||| ||||||| Sbjct 51860727 GACTTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT--CTTAATT 51860670 >seq4 Length=62178258 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| ||||| |||||||| ||| | || || ||||| ||||| ||||| Sbjct 4510741 GTGGATTCCTTTTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGTTGCTTACCG 4510682 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| || ||||||||||| || |||||||||||||| ||||| ||| Sbjct 4510681 GCGAAGATGAGGCGTTGTTGGTCCGGGGGTATGCCTTCTTTGTCTTGGATCTTGGCTTTG 4510622 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| || ||||| || | ||| | || || ||||| || ||| Sbjct 4510621 ACATTATCGATTGTGTCGGAAGACTCGACCTCTAGGGTTATGGTCTTCCCGGTTAGGGTT 4510562 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 4510561 TTCACGAAGATCTGCAT 4510545 >seq6 Length=51074515 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || |||||||| | || | || ||||| ||||| || || ||||| Sbjct 42745431 ATCCCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCA 42745372 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || | |||||| | |||||| |||||| |||| | |||||||||||| || Sbjct 42745371 GCCAAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGT 42745312 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| |||||| || | | || | |||||||| ||| Sbjct 42745311 GGGATGCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCG 42745252 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | || |||||||| | ||||| ||||| || |||||| Sbjct 42745251 ACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCATG 42745201 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || | || | || |||||||| || ||||| |||||| Sbjct 42745203 ATGCCCCCACGAAGGCGTAAGACGAGGTGGAGGGTGGATTCTTTCTGGATGTTATAATCG 42745144 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| ||||| || ||||| |||||| | ||||||||||| ||||| || Sbjct 42745143 GCAAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCGGGT 42745084 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| ||||| || | | || | |||||||| | |||| Sbjct 42745083 GGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTTTCG 42745024 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| || ||||| ||||| |||||||| Sbjct 42745023 ACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCACAAAGATCTGCAT 42744974 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| ||||| |||||||| ||||| || ||| | |||||| | |||||| || Sbjct 42745626 GTAGACTCTTTCTGAATGTTATAATCAGCCAAAGTCCTCCCATCTTCCAATTGTTTGCCG 42745567 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || ||||||| | || || || || || || ||||| || || ||||||| || Sbjct 42745566 GCAAAGATGAGCCTTTGCTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTTGCCTTA 42745507 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||| |||| | ||| || |||| ||| | ||||||||||||| ||| Sbjct 42745506 ACATTGTCAATGGTATCGGAGCTTTCAACCTCCAAGGTGATTGTTTTGCCGGTCAAAGTC 42745447 Query 114366 TTTACAAAAATCTGCAT 114382 || |||||||||||||| Sbjct 42745446 TTGACAAAAATCTGCAT 42745430 >seq9 Length=70713020 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | || ||||| || || |||||||||||| Sbjct 65273639 ATACCCCCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCG 65273580 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| || || || ||||| || ||| ||||||||||||| ||||| || Sbjct 65273579 GCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGT 65273520 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||| || |||| | || | |||||| | | ||| Sbjct 65273519 GGGATGCCTTCCTTGTCTTGAATTTTAGACTTTACATTATCGATGGTGTCAGAGCTCTCG 65273460 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| | |||||| || || |||||||| Sbjct 65273459 ACTTCGAGGGTGATGGTCTTGCCGGTTAAAGTTTTGACGAAGATCTGCAT 65273410 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | || | || ||||| || || |||||||||||| Sbjct 65273411 ATACCCCCACGAAGACGTAAGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCG 65273352 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| || || || ||||| || ||| |||| |||||||| ||||| || Sbjct 65273351 GCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGT 65273292 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||| || || | | || | |||||||| | ||| Sbjct 65273291 GGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTATCGATGGTGTCGGAGCTCTCG 65273232 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| | ||||| || || |||||||| Sbjct 65273231 ACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACGAAGATCTGCAT 65273182 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | || | |||||||| || || |||||||||||| Sbjct 65273183 ATACCCCCACGAAGACGGAGGACAAGGTGGAGGGTAGATTCCTTCTGGATGTTGTAATCG 65273124 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| || || || ||||| || ||| ||||||||||||| ||||| || Sbjct 65273123 GCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGT 65273064 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| ||| || || | | || | |||||| | || Sbjct 65273063 GGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTGTCGATGGTGTCAGAACTCTCA 65273004 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| || ||||| || || |||||||| Sbjct 65273003 ACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAGATCTGCAT 65272954 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || || || |||||| || ||||| |||||| || ||||| || Sbjct 65273834 GTGGATTCCTTCTGGATATTATAATCGGCCAGGGTACGGCCATCTTCGAGCTGTTTGCCG 65273775 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||||||||| ||||| || || |||||||| ||||| || || || Sbjct 65273774 GCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTG 65273715 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| | ||||| || | ||| | || |||||||| | ||| Sbjct 65273714 ACATTGTCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTT 65273655 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 65273654 TTGACGAAGATCTGCAT 65273638 Score = 102 bits (112), Expect = 7e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 |||||| ||||| || ||||||||||| | || || |||||||||||||||||| Sbjct 66888450 CGTAGACTCTTTCTGGATGTTGTAATCAGCGAGGGTCCGGCCATCTTCAAGTTGTTTACC 66888509 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 || |||| || | ||||||||| ||||| || ||||| ||||| ||||| || Sbjct 66888510 TGCAAAGATAAGCCTCTGTTGGTCTGGAGGGATCCCTTCCTTGTCTTGGATCTTGGCCTT 66888569 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | |||| || || | ||| || || | ||| | || ||||| || || || Sbjct 66888570 GACATTATCAATCGTATCAGAACTTTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGT 66888629 Query 114365 TTTTACAAAAATCTGCATG 114383 ||| ||||| ||||||||| Sbjct 66888630 TTTCACAAATATCTGCATG 66888648 Score = 100 bits (110), Expect = 2e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| ||||| || ||||||||||| | ||| || ||||||||| |||||||| Sbjct 66882297 GTAGACTCTTTCTGGATGTTGTAATCCGCAAGAGTTCGGCCATCTTCAAGCTGTTTACCG 66882356 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||||||||| || || || ||||| ||||| ||||| || Sbjct 66882357 GCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTG 66882416 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| || |||| ||| || || | ||| | || ||||| || |||||| Sbjct 66882417 ACATTATCAATTGTATCGGAACTTTCCACCTCGAGGGTGATAGTCTTGCCAGTAAGAGTT 66882476 Query 114366 TTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 66882477 TTCACGAATATCTGCATG 66882494 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || || ||||| | || ||||| || |||||||| || || Sbjct 66881808 ATGCCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCC 66881867 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||||||||| || || ||||| | || | | ||| |||||||| Sbjct 66881868 GCAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGT 66881927 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| || || |||||| || | | |||| || || | || Sbjct 66881928 GGGATCCCTTCCTTATCCTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCC 66881987 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| ||||| || |||||||||||||||||||| Sbjct 66881988 ACCTCCAACGTAATAGTTTTTCCGGTGAGGGTTTTTACAAAAATCTGCAT 66882037 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || ||||| |||||||| ||| | ||| || ||| ||||||||||| || Sbjct 66888679 GTGGACTCCTTTTGGATGTTGTAGTCGGCAAGAGTTCGGCCATCCTCAAGTTGTTTTCCG 66888738 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | |||||||| |||||||| ||||||||||| || || || Sbjct 66888739 GCAAAGATAAGCCTTTGTTGGTCTGGAGGAATCCCTTCTTTGTCTTGGATTTTGGCCTTG 66888798 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | || |||| | ||| || || | ||| | || || || || || ||| Sbjct 66888799 ACATTATCGATAGTATCGGAGCTTTCTACCTCAAGGGTGATGGTCTTACCAGTAAGGGTT 66888858 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| || ||||| Sbjct 66888859 TTCACAAAGATTTGCAT 66888875 >seq7 Length=60982465 Score = 113 bits (124), Expect = 4e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || ||||| || || |||||||| ||| | || || |||||| ||||| || || Sbjct 9403948 GTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCATCTTCGAGTTGCTTGCCG 9403889 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| ||||| |||||||| || ||||||||||| ||||| ||||| ||| Sbjct 9403888 GCGAAGATAAGACGTTGTTGGTCAGGTGGAATGCCTTCCTTGTCTTGGATCTTAGCTTTG 9403829 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||||| || ||||| || | ||| | || || || || || ||| Sbjct 9403828 ACATTGTCAATGGTGTCGGAAGACTCGACCTCTAGGGTTATAGTCTTCCCCGTTAGGGTT 9403769 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 9403768 TTGACGAAGATCTGCAT 9403752 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 114193 CTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGA 114252 ||||||||||||||||||| || ||||| ||||||||||||||||||||| | | Sbjct 60048064 CTTTTTGAATGTTGTAATCAGCCAATGTACGGCCATCTTCAAGTTGTTTACCAGCAAAAA 60048005 Query 114253 TGAGACGCTGTTGGTCCGGAGGAATGCCT 114281 | | ||| ||||||||||| ||||| ||| Sbjct 60048004 TTAAACGTTGTTGGTCCGGGGGAATTCCT 60047976 >seq2 Length=62769430 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || ||||| | || || || ||||| ||||||||||| Sbjct 10549622 ATTCCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCA 10549563 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || ||||| |||||| ||||| ||||| || |||| || | ||| ||||| ||| Sbjct 10549562 GCCAGGGTACGGCCATCTTCTAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGA 10549503 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| ||||| || | | |||| |||||| | | ||| Sbjct 10549502 GGGATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCCGAGCTTTCC 10549443 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || |||||||| || || || ||||| || ||||| Sbjct 10549442 ACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 10549393 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| ||||||||||||||||| || | || ||| |||||||||||| ||||| Sbjct 10571630 GTAGACTCTTTTTGAATGTTGTAGTCAGCAAGGGTGCGACCATCTTCAAGTTGCTTACCG 10571571 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||||||||| || || || |||||||| || ||||| || Sbjct 10571570 GCAAAGATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCTTTATCCTGGATCTTAGCCTTG 10571511 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||| | | ||| || || | ||| | || ||||| || || ||| Sbjct 10571510 ACATTATCAATTGTGTCAGAGCTTTCAACCTCAAGGGTGATTGTCTTGCCAGTAAGGGTT 10571451 Query 114366 TTTACAAAAATCTGCATG 114383 ||||| || ||||||||| Sbjct 10571450 TTTACGAAGATCTGCATG 10571433 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| ||||| || |||||||| || | || || ||| || |||||||||||| Sbjct 10571858 GTAGACTCTTTCTGGATGTTGTAGTCAGCAAGGGTGCGGCCATCCTCCAGTTGTTTACCA 10571799 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | ||||||||| ||||| || ||||||||||| ||||| || Sbjct 10571798 GCAAAGATAAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTG 10571739 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| ||||||| | ||| || || | ||| | || ||||| || || ||| Sbjct 10571738 ACATTATCAATTGTGTCGGAGCTTTCCACTTCAAGGGTGATTGTCTTGCCAGTAAGGGTT 10571679 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| || |||||| Sbjct 10571678 TTGACAAATATTTGCATG 10571661 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | ||| ||||| | ||||| || || || || || |||||| Sbjct 27609689 ATACCACCCCGAAGGCGGAGAACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCG 27609630 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| | ||||||||||||||| ||||| | || | | |||||||| || Sbjct 27609629 GCAAGAGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGT 27609570 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||||||||| |||||| ||| | | |||| ||| || | ||| Sbjct 27609569 GGGATTCCTTCTTTGTCCTGAATCTTGGCTTTCACATTATCAATGGTATCCGAACTCTCG 27609510 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| ||| | || || || || |||||||| ||||| || |||||| Sbjct 27609509 ACCTCCAAGGTGATTGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCATG 27609459 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| ||||| | || || || |||||||||||||| || Sbjct 10550306 ATCCCACCACGAAGACGAAGAACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCT 10550247 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | ||| ||||| || ||||| ||| | || | | ||||||||| ||| Sbjct 10550246 GCAAGTGTCCTGCCATCCTCAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGA 10550187 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| ||||| || || || | | |||| ||||||| | || Sbjct 10550186 GGGATACCTTCCTTGTCCTGGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCA 10550127 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | ||||| ||||| ||||| || |||||||||||||| Sbjct 10550126 ACTTCCAAGGTGATGGTTTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 10550077 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || ||||| | || ||||| ||||| ||||||||||| Sbjct 10550078 ATACCACCACGAAGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCA 10550019 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||||||||| ||||| || |||| | | ||||||||| || Sbjct 10550018 GCGAGAGTGCGGCCATCTTCAAGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGG 10549959 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| ||||| || | | |||| ||| || | || Sbjct 10549958 GGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCA 10549899 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||| ||||| || ||||| || ||||| Sbjct 10549898 ACCTCCAAAGTAATGGTCTTTCCGGTAAGAGTCTTCACAAATATTTGCAT 10549849 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || |||||||| |||| | ||| || || | || |||||||| ||||||||||| ||| Sbjct 27609233 ATGCCGCCACGAAGTCGAAGAACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAGTCG 27609174 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| ||||||||||| ||||| | || || | ||| || ||||| Sbjct 27609173 GCTAGCGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAATATAAGCCTCTGCTGATCCGGT 27609114 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || ||||| || || ||||| || | | |||| |||||| | || Sbjct 27609113 GGGATCCCTTCCTTATCTTGGATCTTAGCCTTCACATTATCAATGGTGTCTGAACTCTCC 27609054 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || || ||||| ||||| || ||||| Sbjct 27609053 ACCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTAACAAAGATTTGCAT 27609004 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | ||| || ||||| | ||||| || ||||||||||| || || Sbjct 10572119 ATACCACCACGAAGACGCAACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCT 10572060 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || | ||||||||| ||||| ||||| | || | | ||| ||||| || Sbjct 10572059 GCAAGGGTTCTGCCATCTTCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGT 10572000 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| |||||| || | | |||| || || | || Sbjct 10571999 GGGATGCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTATCAATTGTATCAGAACTCTCC 10571940 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | ||||| || || || ||||||||||| ||||||||| Sbjct 10571939 ACCTCTAAAGTGATGGTTTTTCCAGTGAGCGTTTTTACAAAGATCTGCATG 10571889 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || ||||||||||| || | |||||| ||| || || || |||||| Sbjct 10549361 GTGGACTCCTTCTGAATGTTGTAGTCAGCAAGTGTACGACCATCCTCTAGCTGCTTACCA 10549302 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 || |||| || | |||||| || || || || |||||||| || ||||| || Sbjct 10549301 GCAAAGATAAGCCTCTGTTGATCTGGTGGGATTCCTTCTTTATCTTGGATCTTGGCCTTG 10549242 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| | ||| || || | ||| | || |||||||| || || Sbjct 10549241 ACATTATCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTC 10549182 Query 114366 TTTACAAAAATCTGCAT 114382 || || ||||| ||||| Sbjct 10549181 TTGACGAAAATTTGCAT 10549165 >seq11 Length=62681010 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || ||||| |||||||||||| || || || ||||| || ||||| || Sbjct 1163939 GTTGACTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGTTTTCCG 1163998 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| |||||||| ||||| ||||| |||||||| || || || || || Sbjct 1163999 GCGAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTC 1164058 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||||| | ||||| || | || | ||| |||||||| ||||| Sbjct 1164059 ACGTTGTCGATCGTGTCGGAGCTCTCGACCTCGAGTGTGATCGTCTTGCCGGTTAGAGTC 1164118 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 1164119 TTAACGAAGATCTGCAT 1164135 >seq13 Length=58321163 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || ||||| || || |||||||| || | ||||| ||| || Sbjct 44437652 ACCAAATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCC 44437711 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 |||||||||||||| |||| || | ||| ||||| || || || ||||||||||| Sbjct 44437712 AGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCTTTGTCTTGG 44437771 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| |||| | || | ||| || | ||| || || | ||| | || || Sbjct 44437772 ATCTTGGCCTTTACATTGTCGATGGTATCAGAACTTTCCACCTCAAGGGTGATGGTCTTC 44437831 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || || || |||||||| ||||| Sbjct 44437832 CCGGTGAGGGTCTTGACAAAAATTTGCAT 44437860 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | || || || | || || || || || ||||||||||| Sbjct 44437403 ATTCCTCCACGGAGGCGAAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCA 44437462 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || ||| |||||||| ||||||||| |||| || | || ||||| || Sbjct 44437463 GCCAATGTGCGGCCATCCTCAAGTTGCTTACCAGCGAAGATCAGCCTTTGCTGGTCTGGG 44437522 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || |||||||| ||||| |||||| || | | |||| || || | || Sbjct 44437523 GGGATGCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTATCAGAACTCTCC 44437582 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || ||||| || || || |||||||| ||||| Sbjct 44437583 ACCTCCAATGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAAATTTGCAT 44437632 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420129105518808