Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq11 154 3e-32 seq10 147 5e-30 seq9 134 3e-26 seq4 129 1e-24 seq6 127 5e-24 seq13 118 3e-21 seq2 114 3e-20 >seq11 Length=62681010 Score = 154 bits (170), Expect = 3e-32 Identities = 179/239 (75%), Gaps = 12/239 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| | | || ||||| || | || || |||||||| || || ||||| Sbjct 1163909 CCACCGCGCAAACGGAGGACGAGGTGGAGAGTTGACTCCTTTTGGATGTTGTAATCGGCC 1163968 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 | || || |||||||| | |||||||| ||||||||||||||||| || ||| Sbjct 1163969 AAGGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAAGATCAGACGCTGCTG---GTCTGGA 1164025 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||| ||||| ||||| |||||||| || |||||||| || || | || |||| Sbjct 1164026 GGGATGCCTTCCTTATCTTGGATTTTGGCCTTCACGTTGTCGATCGTGTCGGAGCTC--- 1164082 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 || || ||||| ||||||||||| ||||| |||||||| ||||| |||||||| |||| Sbjct 1164083 TCGACCTCGAGTGTGATCGTCTTGCCGGTTAGAGTCTTAACGAAGATCTGCATCTTGTT 1164141 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| |||| ||| ||| || |||||||| |||||||| Sbjct 3842785 CCACCGCGGAGGCGGAGGACGAGGTGAAGAGTGGATTCCTTCTGGATATTGTAGTCGGCT 3842844 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| |||||||| | || || || |||||||| || || |||||| ||| Sbjct 3842845 AAGGTGCGGCCGTCTTCAAGCTGCTTCCCGGCGAAGATAAGGCGTTGTTGATCGGGAGGG 3842904 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || ||||| || || || || | ||| || || || Sbjct 3842905 ATGCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCGACC 3842964 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || ||||| || || || |||||||| |||||||| Sbjct 3842965 TCAAGGGTTATGGTTTTCCCCGTTAGGGTTTTGACGAAGATCTGCAT 3843011 Score = 138 bits (152), Expect = 3e-27 Identities = 172/233 (74%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || ||||||| || ||| || |||||||| || ||||| Sbjct 1163453 CCACCTCGAAGACGTAGAACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCT 1163512 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 | || || ||||| || | ||| ||||| |||||||| ||||| || || ||||| Sbjct 1163513 AAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGG---TCTGGC 1163569 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||| ||||| || || |||||||| ||||||||||| || || | || |||| Sbjct 1163570 GGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCACGTTGTCGATCGTGTCAGAGCTC--- 1163626 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||||||||| ||||| || ||||| ||||| || ||||| Sbjct 1163627 TCGACCTCGAGAGTGATCGTCTTTCCGGTAAGCGTCTTAACGAAGATTTGCAT 1163679 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || || |||| ||| || ||||| ||||| || || || Sbjct 1163225 CCACCACGAAGACGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCC 1163284 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| ||||| | ||||| || || || |||| | || ||| ||| Sbjct 1163285 AAAGTCCTTCCATCTTCCAGCTGTTTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGA 1163344 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 ||||||||||| ||||| || |||||||||||||| || || | ||| |||| || Sbjct 1163345 ATTCCTTCTTTGTCCTGAATCTTCGCTTTCACGTTATCAATCGTATCCGAGCTC---TCC 1163401 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | || |||||||| ||||||| |||||||||||| |||||||| Sbjct 1163402 ACTTCTAAAGTAATCGTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 1163451 >seq10 Length=62175169 Score = 147 bits (162), Expect = 5e-30 Identities = 175/235 (74%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | || |||||||| | ||| || || ||||| || || | Sbjct 51860907 CATG-CCACCACGTAGACGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAAT 51860849 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 |||| | || || || ||||| | |||||||| |||||||| ||||| ||||| Sbjct 51860848 CGGCCAAGGTCCGGCCATCTTCGAGCTGTTTTCCGGCGAAGATGAGACGTTGTTGGTCTG 51860789 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCG 288418 |||||| ||||| || || ||||||||||| || ||||| || || | ||| ||| Sbjct 51860788 GTGGGATCCCTTCCTTGTCTTGGATTTTCGCCTTAACGTTGTCGATCGTGTCGGAACTC- 51860730 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||| ||||| ||||| |||||||| ||||| ||||| |||||||| Sbjct 51860729 --TCGACTTCGAGGGTGATGGTCTTGCCGGTCAGGGTCTTAACGAAGATCTGCAT 51860677 Score = 91.5 bits (100), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || || ||||| || || || | || | ||| ||||| || ||||| || ||||| Sbjct 51861324 TTCCTTCTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAACTGTTTCCCAGCGAA 51861265 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 |||| | || ||| ||| || |||||||| ||||| || ||||| || || || Sbjct 51861264 AATCAACCTTTGCTGATCTGGTGGAATCCCTTCTTTGTCCTGAATCTTCGCCTTAACATT 51861205 Query 288402 TTCTATAGAATCG---CTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 || || | |||| ||| || || || | || || || ||||| |||| ||||| Sbjct 51861204 GTCGATCGTATCGGAACTC---TCCACCTCCAAAGTTATGGTTTTCCCAGTCAACGTCTT 51861148 Query 288459 GACGAATATCTGCAT 288473 |||||| |||||||| Sbjct 51861147 GACGAAAATCTGCAT 51861133 >seq9 Length=70713020 Score = 134 bits (148), Expect = 3e-26 Identities = 169/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| ||||| || | || ||||| || | ||| ||| || ||||||||||| ||||| Sbjct 65273865 TCCCCCGCGAAGACGGAGGACGAGGTGGAGGGTGGATTCCTTCTGGATATTATAATCGGC 65273806 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| | ||||| || |||||||| |||||||| || ||| Sbjct 65273805 CAGGGTACGGCCATCTTCGAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGTGG 65273746 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTC 288422 ||| ||||| || || |||||||| | || || || || || | || |||| || Sbjct 65273745 GATGCCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATGGTGTCGGAGCTC---TC 65273689 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| | || |||||||| |||||||| Sbjct 65273688 GACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACGAAGATCTGCAT 65273638 Score = 123 bits (136), Expect = 6e-23 Identities = 170/235 (72%), Gaps = 7/235 (3%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | || | ||| || ||||| | ||| || ||||||||||| |||| Sbjct 66882491 CATG-CCACCCCTTAGACGAAGGACTAGATGGAGGGTGGACTCCTTTTGGATATTGTAGT 66882549 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAG 288358 |||| || || || || || || | ||||||||| || ||||| || | |||| | || Sbjct 66882550 CGGCAAGAGTTCGGCCATCCTCGAGTTGTTTTCCGGCAAAGATAAGCCTTTGCTGGTCAG 66882609 Query 288359 AATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCG 288418 | ||||| |||||||| || |||||||| || || || || || |||| ||| Sbjct 66882610 GA---GGGATCCCTTCTTTGTCTTGGATTTTAGCCTTGACATTATCGATAGTATCAGAAC 66882666 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||| || || ||||| ||||| || || || || || || || |||||||| Sbjct 66882667 TTTCTACCTCAAGGGTGATGGTCTTACCAGTAAGGGTTTTCACAAAGATCTGCAT 66882721 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || ||||| | ||| || || |||||||| |||||||| Sbjct 66881127 CCACCACGGAGGCGAAGGACAAGATGCAGTGTGGACTCCTTCTGGATATTGTAGTCGGCT 66881186 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || || || || || || || |||| | ||| || ||| Sbjct 66881187 AGAGTTCGACCATCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGA 66881246 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || ||||| || ||||||||||| || || || | || |||| || Sbjct 66881247 ATCCCCTCCTTGTCCTGAATCTTCGCTTTCACATTGTCGATCGTGTCTGAGCTC---TCC 66881303 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| || |||||||||| ||||| |||||||||||||| Sbjct 66881304 ACCTCCAGGGTGATTGTTTTCCCGGTCAAGGTCTTCACGAATATCTGCAT 66881353 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || || || || || || ||||| | ||||| || || ||| Sbjct 66882303 TCTTTCTGGATGTTGTAATCCGCAAGAGTTCGGCCATCTTCAAGCTGTTTACCGGCAAAG 66882362 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | |||||| |||||| ||||| || || ||||| || || || || || Sbjct 66882363 ATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTA 66882422 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| ||| || ||||| ||||| ||||| || || ||||| || ||| Sbjct 66882423 TCAATTGTATCGGAACTTTCCACCTCGAGGGTGATAGTCTTGCCAGTAAGAGTTTTCACG 66882482 Query 288463 AATATCTGCAT 288473 ||||||||||| Sbjct 66882483 AATATCTGCAT 66882493 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | || | ||| || || || | ||| ||||| ||||| || || || ||| Sbjct 66888421 CCACCCCTAAGACGAAGGACAAGGTGGAGCGTAGACTCTTTCTGGATGTTGTAATCAGCG 66888480 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || || || ||||| | |||||| ||||| ||||| || | |||||| ||||| Sbjct 66888481 AGGGTCCGGCCATCTTCAAGTTGTTTACCTGCAAAGATAAGCCTCTGTTGG---TCTGGA 66888537 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||| ||||| || || ||||| || || || || || || || | ||| ||| Sbjct 66888538 GGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATCAGAACTTTCC 66888597 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || || || || || ||||||||||| Sbjct 66888598 ACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAATATCTGCAT 66888647 Score = 102 bits (112), Expect = 2e-16 Identities = 164/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || ||||| | ||| || || |||||||| ||||| || Sbjct 66887509 CCACCACGAAGGCGAAGGACAAGATGCAGAGTGGACTCCTTCTGGATATTGTAGTCTGCT 66887568 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || || || || || || || || || || ||||||| | ||| || ||||| Sbjct 66887569 AAAGTTCGACCATCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGG---TCTGGA 66887625 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 || || || || ||||| || || |||||||| || || || | || |||| Sbjct 66887626 GGAATCCCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTC--- 66887682 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || ||||| || ||||| |||| |||||| |||||||||||||| Sbjct 66887683 TCCACCTCCAGGGTGATGGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 66887735 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/198 (71%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| |||||||| || || || | || || || | || ||||| || || Sbjct 66881390 TTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAA 66881449 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||| || ||||| || || || || ||||| ||||||||||| || Sbjct 66881450 AATCAACCTCTGCTGG---TCTGGAGGAATCCCCTCCTTGTCCTGAATTTTCGCTTTGAC 66881506 Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 || || || | || |||| || || || || ||||| || || ||||||| || Sbjct 66881507 ATTGTCAATGGTGTCCGAGCTC---TCGACCTCCAGGGTGATGGTTTTACCGGTCAAGGT 66881563 Query 288456 CTTGACGAATATCTGCAT 288473 ||| |||||||||||||| Sbjct 66881564 CTTCACGAATATCTGCAT 66881581 Score = 89.7 bits (98), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||||||||| || || || || | || ||||| | ||||| || || || Sbjct 66881619 TCTTTCTGGATATTATAATCTGCAAGTGTCCTACCATCTTCGAGCTGTTTGCCAGCAAAA 66881678 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||| ||| ||| || ||||| || |||||||| || ||||| || || Sbjct 66881679 ATCAACCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCCTGGATCTTAGCTTTTACATTG 66881738 Query 288403 TCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | || ||| || ||||| | || || ||||| ||||| |||||||| Sbjct 66881739 TCAATGGTGTCAGAACTC---TCAACTTCCAAAGTAATAGTCTTTCCGGTGAGAGTCTTC 66881795 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 66881796 ACAAAAATTTGCAT 66881809 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/198 (71%), Gaps = 12/198 (6%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| |||||||| |||||||| || ||||| | || || || | || ||||| || || Sbjct 66887772 TTCCTTTTGGATGTTATAGTCCGCAAGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAA 66887831 Query 288342 GATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCAC 288398 |||| | ||| || ||||| || || || || ||||| ||||||||||| || Sbjct 66887832 AATCAACCTCTGCTGG---TCTGGAGGAATCCCCTCCTTGTCCTGAATTTTCGCTTTAAC 66887888 Query 288399 GTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 || || || | || |||| || || || || || || || || || |||| || Sbjct 66887889 ATTGTCAATGGTGTCCGAGCTC---TCGACCTCCAGTGTTATGGTTTTACCAGTCAAGGT 66887945 Query 288456 CTTGACGAATATCTGCAT 288473 ||| |||||||||||||| Sbjct 66887946 CTTAACGAATATCTGCAT 66887963 >seq4 Length=62178258 Score = 129 bits (142), Expect = 1e-24 Identities = 168/231 (73%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||| | || || || || | ||| ||| |||||||| || |||||||| Sbjct 4510771 CCACCCCTGAGACGGAGAACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGCT 4510712 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | ||||| |||||||| | ||| || || |||||||| || || ||||| || ||| Sbjct 4510711 AAGGTGCGGCCGTCTTCGAGTTGCTTACCGGCGAAGATGAGGCGTTGTTGG---TCCGGG 4510655 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || |||||||| || ||||| || ||||| || || || || | ||| || || Sbjct 4510654 GGTATGCCTTCTTTGTCTTGGATCTTGGCTTTGACATTATCGATTGTGTCGGAAGACTCG 4510595 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || || ||||||||||| || || || ||||| ||||||||| Sbjct 4510594 ACCTCTAGGGTTATGGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCATT 4510544 >seq6 Length=51074515 Score = 127 bits (140), Expect = 5e-24 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || || || || | || || |||| ||| ||| |||||||||||||| || || Sbjct 42745428 CCTCCACGAAGCCTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCC 42745369 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| |||||||| || |||||||||| ||||||||| | |||| Sbjct 42745368 AAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGG 42745309 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCG---CTCGATTCT 288423 || ||||| || || || || || || || ||||| || || | ||| ||| || Sbjct 42745308 ATGCCTTCCTTGTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTC---TCG 42745252 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| | || ||||| || || ||||| Sbjct 42745251 ACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 42745202 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | ||| || || |||| || ||||| || || ||||| || Sbjct 42745659 TGGCCACCACGGAGACGAAGAACAAGGTGAAGGGTAGACTCTTTCTGAATGTTATAATCA 42745600 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || | || | || ||||| |||||||| || || ||||| || | || ||| | | Sbjct 42745599 GCCAAAGTCCTCCCATCTTCCAATTGTTTGCCGGCAAAGATGAGCCTTTGCTGATCAGGT 42745540 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||||||||| |||||||| || || || || || || || || | |||| ||| Sbjct 42745539 GGGATTCCTTCCTTATCCTGAATCTTTGCCTTAACATTGTCAATGGTATCGGAGCTTTCA 42745480 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || | ||||| || || ||||||| ||||||||| || |||||||| Sbjct 42745479 ACCTCCAAGGTGATTGTTTTGCCGGTCAAAGTCTTGACAAAAATCTGCAT 42745430 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || ||||| || ||||||||||| || || | |||||| || || ||| Sbjct 41223033 CCTTCTTTGTCTTGGATCTTGGCTTTCACGTTGTCAATGGTATCGCTGCTCTCGACCTCG 41222974 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || || |||||||||||||| Sbjct 41222973 AGAGTTATGGTCTTGCCGGTTAGCGTTTTCACGAATATCTGCAT 41222930 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 |||||||| || ||||| || ||||| ||||| || || | |||||| || || ||| Sbjct 41189755 CCTTCTTTGTCTTGGATCTTGGCTTTGACGTTGTCAATGGTATCGCTGCTCTCGACCTCG 41189696 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| || || || |||||||||||||| Sbjct 41189695 AGAGTTATGGTCTTGCCGGTTAGGGTTTTCACGAATATCTGCAT 41189652 >seq13 Length=58321163 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || || || | ||| ||| || ||||| || || || || Sbjct 44436722 CCACCGCGGAGGCGAAGGACCAGGTGCAAAGTGGATTCCTTCTGGATGTTGTAATCTGCA 44436781 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || | || ||||| | ||| || || || || ||||| | ||| || |||| Sbjct 44436782 AGGGTCCTCCCATCTTCAAGTTGCTTCCCAGCAAAAATCAGCCTCTGCTGGTCTGGTGGG 44436841 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 |||||||| ||||||||||| || || || || || || || | || |||| || Sbjct 44436842 ATTCCTTCCTTATCCTGGATCTTGGCCTTAACATTATCAATCGTGTCTGAGCTC---TCA 44436898 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 44436899 ACTTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTCACGAAAATTTGCAT 44436948 Score = 104 bits (114), Expect = 6e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || ||||| || || || || || || || | |||||| || || || Sbjct 44437669 TTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCCAGTTGTTTACCAGCAAA 44437728 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | ||| || |||||| |||||||| || ||||| || || || || || Sbjct 44437729 GATAAGCCTCTGCTGGTCTGGTGGGATCCCTTCTTTGTCTTGGATCTTGGCCTTTACATT 44437788 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||| || || || ||||| ||||||||||| || |||||||| Sbjct 44437789 GTCGATGGTATCAGAACTTTCCACCTCAAGGGTGATGGTCTTCCCGGTGAGGGTCTTGAC 44437848 Query 288462 GAATATCTGCAT 288473 || || ||||| Sbjct 44437849 AAAAATTTGCAT 44437860 Score = 100 bits (110), Expect = 7e-16 Identities = 164/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | || | ||| || || |||||||||||||| || Sbjct 44437178 CCACCACGAAGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCC 44437237 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || || || || || || | ||| || || || || ||||| | |||||| ||| Sbjct 44437238 AGGGTACGGCCATCCTCCAGTTGCTTACCAGCAAAAATCAGCCTCTGTTG---GTCTGGG 44437294 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 |||||||| || || ||||| ||||| || || || || || || | ||| ||| Sbjct 44437295 GGGATTCCCTCCTTGTCCTGAATTTTTGCCTTAACATTGTCAATGGTATCTGAACTC--- 44437351 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || | || || |||||||| |||| |||||| || || || |||||| Sbjct 44437352 TCTACCTCCAATGTAATGGTCTTCCCAGTCAAAGTCTTAACAAAAATTTGCATT 44437405 Score = 93.3 bits (102), Expect = 1e-13 Identities = 162/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || | || | ||| || || ||||| || || || || Sbjct 44436950 CCACCACGGAGACGGAGAACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGCA 44437009 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || | || || |||| || ||||| || || ||||| | ||| || ||||| Sbjct 44437010 AGGGTCCTCCCATCCTCTAGCTGCTTTCCAGCAAATATCAGCCTCTGCTGG---TCTGGA 44437066 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||| ||||| ||||| || ||||| || || || || || || | || |||| Sbjct 44437067 GGGATACCTTCCTTATCTTGAATTTTGGCCTTAACATTATCGATTGTGTCAGAGCTC--- 44437123 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| || ||||| ||||||||||| || ||||| || || |||||||| Sbjct 44437124 TCAACTTCCAGGGTGATGGTCTTCCCGGTAAGTGTCTTCACAAAAATCTGCAT 44437176 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| || ||||| || ||||| || || || || || || || | ||||| || || || Sbjct 44437897 TTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCCAGCTGTTTACCAGCAAA 44437956 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | |||||| |||||| ||||| || || ||||| || | || || || Sbjct 44437957 GATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGTCTTTACATT 44438016 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| ||| || || || ||||| ||||| || || || |||||||| Sbjct 44438017 GTCGATGGTATCAGAACTTTCCACCTCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGAC 44438076 Query 288462 GAATATCTGCAT 288473 ||| || ||||| Sbjct 44438077 GAAAATTTGCAT 44438088 >seq2 Length=62769430 Score = 114 bits (126), Expect = 3e-20 Identities = 168/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| | ||| | ||| || || || | || |||||||| || || |||| Sbjct 10571664 CATG-CCACCCCTGAGACGAAGCACAAGGTGGAGGGTAGACTCTTTTTGAATGTTGTAGT 10571606 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || || ||||| || ||||| | ||| || || || ||||| || | |||||| | Sbjct 10571605 CAGCAAGGGTGCGACCATCTTCAAGTTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCAG 10571546 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 ||||| ||||||||||||||||| || || || || || || || | || ||| Sbjct 10571545 GGGGGATCCCTTCTTTATCCTGGATCTTAGCCTTGACATTATCAATTGTGTCAGAGCT-- 10571488 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || || ||||| ||||| || || || || || ||||| |||||||| Sbjct 10571487 -TTCAACCTCAAGGGTGATTGTCTTGCCAGTAAGGGTTTTTACGAAGATCTGCAT 10571434 Score = 113 bits (124), Expect = 1e-19 Identities = 142/194 (73%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||||||||| ||||| || || | ||| ||||| | ||||||||| || || Sbjct 27609650 TCCTTCTGGATATTATAATCGGCAAGAGTTCTTCCATCTTCAAGTTGTTTTCCAGCAAAA 27609591 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 |||| | ||||| ||||||||||||||| ||||| || || |||||||| || Sbjct 27609590 ATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTGTCCTGAATCTTGGCTTTCACATTA 27609531 Query 288403 TCTATAGAATCGCTCGA---TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || | ||| ||| || || || | ||||| ||||| || || ||||| ||| Sbjct 27609530 TCAATGGTATC---CGAACTCTCGACCTCCAAGGTGATTGTCTTTCCAGTGAGAGTTTTG 27609474 Query 288460 ACGAATATCTGCAT 288473 || || || ||||| Sbjct 27609473 ACAAAGATTTGCAT 27609460 Score = 111 bits (122), Expect = 4e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || || || || ||||| || || || || || || |||| || || || || ||| Sbjct 10549355 TCCTTCTGAATGTTGTAGTCAGCAAGTGTACGACCATCCTCTAGCTGCTTACCAGCAAAG 10549296 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||||||| |||||||||||||||||| ||||| || || || || || Sbjct 10549295 ATAAGCCTCTGTTGATCTGGTGGGATTCCTTCTTTATCTTGGATCTTGGCCTTGACATTA 10549236 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| ||| || || || ||||| ||||| ||||| || ||||||||| Sbjct 10549235 TCGATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACG 10549176 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 10549175 AAAATTTGCAT 10549165 Score = 105 bits (116), Expect = 2e-17 Identities = 166/235 (71%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| || || | |||||| || || | ||| |||||||||||||| || | Sbjct 27609462 CATG-CCACCTCGAAGACGAAGTACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAAT 27609404 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | || | ||||| || ||||| | || ||||| || ||||| || | ||| ||| Sbjct 27609403 CAGCTAAGGTGCGACCATCTTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCTG 27609344 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCG 288418 |||||| ||||| || || ||||| || || || || || || || | || ||| Sbjct 27609343 GTGGGATCCCTTCCTTGTCTTGGATCTTTGCCTTTACATTATCAATTGTGTCAGAGCT-- 27609286 Query 288419 ATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||| || || | || || ||||| || || ||||||||||| || || ||||| Sbjct 27609285 -TTCAACCTCCAAGGTAATTGTCTTTCCAGTGAGAGTCTTGACAAAGATTTGCAT 27609232 Score = 102 bits (112), Expect = 2e-16 Identities = 164/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || || || | || ||| || ||||| || ||||| || Sbjct 10550531 CCACCGCGAAGGCGGAGGACAAGGTGCAGAGTCGATTCCTTCTGGATGTTGTAGTCTGCC 10550472 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 | || | ||| ||||| | ||| || ||||| ||||||| | ||| || ||||| Sbjct 10550471 AAGGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAAGATCAACCTCTGCTGG---TCTGGC 10550415 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||||||||| ||||| ||||| || || ||||| || || |||| || ||| | Sbjct 10550414 GGGATTCCTTCCTTATCTTGGATCTTGGCCTTCACATTATCAATAGTGTCCGAGCT---T 10550358 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | ||||| ||||| || |||| ||||| || || || ||||| Sbjct 10550357 TCAACTTCCAAAGTGATGGTCTTTCCTGTCAATGTCTTCACAAAAATTTGCAT 10550305 Score = 100 bits (110), Expect = 7e-16 Identities = 164/233 (70%), Gaps = 10/233 (4%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | ||| | ||| ||| |||||||| || ||||| || Sbjct 10549847 CCACCACGAAGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCC 10549788 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT--- 288363 || ||||| || ||||||||||| || || || ||||||| | ||| || ||| Sbjct 10549787 AGGGTGCGGCCATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTG---GTCTGGC 10549731 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || || |||||||| || || || || || || || | || || | ||| Sbjct 10549730 GGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTAT--CTGAACTCT 10549673 Query 288424 --ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || | || || ||||| ||||||| ||||| || || || |||||| Sbjct 10549672 CAACCTCCAAAGTAATTGTCTTTCCGGTCAAGGTCTTAACAAAGATTTGCATT 10549620 Score = 98.7 bits (108), Expect = 2e-15 Identities = 163/233 (70%), Gaps = 12/233 (5%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| || | ||| | || || ||||| || || ||||| || Sbjct 10550303 CCACCACGAAGACGAAGAACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCA 10550244 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG- 288365 || || | || || || | || || || ||||| |||| | |||||| ||||| Sbjct 10550243 AGTGTCCTGCCATCCTCAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGG---TCTGGA 10550187 Query 288366 --GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGAT 288420 ||| ||||| || ||||||||||| || || || || || |||| || |||| Sbjct 10550186 GGGATACCTTCCTTGTCCTGGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTC--- 10550130 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | ||||| || |||||||| |||||||| || || |||||||| Sbjct 10550129 TCAACTTCCAAGGTGATGGTTTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 10550077 Score = 89.7 bits (98), Expect = 1e-12 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||||||||| |||||||| | || | || ||||| | || || || || ||| Sbjct 27609878 TCCTTTTGGATATTGTAGTCGGCCAATGTCCTACCATCTTCGAGCTGCTTGCCAGCAAAG 27609819 Query 288343 ATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || || | || || ||| ||||| || || || || ||||| || || ||||| Sbjct 27609818 ATGAGCCTTTGCTG---GTCTGGGGGGATACCCTCCTTGTCTTGGATCTTTGCCTTCACA 27609762 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || | |||| ||| || || | ||||| ||||| ||||| |||||||| Sbjct 27609761 TTGTCAATGGTATCGGAACTTTCAACCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTT 27609702 Query 288460 ACGAATATCTGCAT 288473 || || |||||||| Sbjct 27609701 ACAAAGATCTGCAT 27609688 Score = 86.0 bits (94), Expect = 1e-11 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | ||| || ||||| | || || |||||||||||||| || || Sbjct 27610142 CCACCGCGAAGGCGAAGGACAAGATGCAGAGTAGACTCCTTTTGGATATTATAATCAGCC 27610083 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | || ||||| | ||| || || || || || || | || || |||| Sbjct 27610082 AATGTCCTGCCATCTTCAAGTTGCTTGCCAGCAAATATGAGCCTTTGCTGGTCTGGTGGG 27610023 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || || || || || || || || || || | || ||| || Sbjct 27610022 ATCCCTTCCTTGTCTTGAATCTTTGCCTTAACATTGTCAATGGTGTCTGAACTTTCAACC 27609963 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || || |||||||| || || |||||||| Sbjct 27609962 TCTAGAGTGATAGTCTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 27609916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179638771791052