Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq11 116 4e-21 seq2 114 1e-20 seq8 111 2e-19 seq6 104 3e-17 seq13 100 3e-16 seq9 98.7 1e-15 >seq11 Length=62681010 Score = 116 bits (128), Expect = 4e-21 Identities = 145/195 (74%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || ||||||||||| || | ||||||| |||| || || ||||| || ||||| Sbjct 1163489 TCCTTCTGGATATTGTAATCGGCTAAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAG 1163548 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| || |||||||| | || | || |||||||| |||||| ||| | ||| Sbjct 1163549 ATGAGACGTTGCTGGTCTGGCGGGATGCCTTCCTTGTCTTGGATTTTGGCTTTCA-CGTT 1163607 Query 42138 G-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | |||||| |||| || || |||| ||||| || || || || |||||||| Sbjct 1163608 GTCGATCGTGTCAGAGCTC---TCGACCTCGAGAGTGATCGTCTTTCCGGTAAGCGTCTT 1163664 Query 42194 TACAAAGATTTGCAT 42208 || ||||||||||| Sbjct 1163665 AACGAAGATTTGCAT 1163679 Score = 105 bits (116), Expect = 7e-18 Identities = 145/199 (73%), Gaps = 8/199 (4%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| || |||||||| |||| ||||| |||| || ||||| || || ||||| Sbjct 1163944 CTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAA 1164003 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || ||||||||||| | || | || ||||| || |||||| || | ||| Sbjct 1164004 GATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTCA-CGT 1164062 Query 42137 CG-CCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCT 42192 | | | |||||| |||| || || |||| ||||| || ||||| ||||| |||| Sbjct 1164063 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGTGTGATCGTCTTGCCGGTTAGAGTCT 1164119 Query 42193 TTACAAAGATTTGCATTTT 42211 | || ||||| ||||| || Sbjct 1164120 TAACGAAGATCTGCATCTT 1164138 >seq2 Length=62769430 Score = 114 bits (126), Expect = 1e-20 Identities = 154/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 ||||||||| | ||| ||||||||| || |||||||||||||| || || | || || Sbjct 10549602 CACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCCAGGGTACGGCCATCTTC 10549543 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 ||| |||||||| || || || |||| ||||||||| | || | | || ||||| Sbjct 10549542 TAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGGATCCCTTCTTTGTCTTG 10549483 Query 42119 GATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 ||| || |||| | | | ||||| ||| |||||| |||| ||||| || Sbjct 10549482 GATCTTGGCCTTGACATTATCAATGGTGTCCGAGCT---TTCCACCTCGAGGGTGATAGT 10549426 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||| || || ||||| |||||||||||||| Sbjct 10549425 CTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 10549393 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 ||||||||||| || | || ||||||||| |||||||| || |||| |||| | Sbjct 27609902 CGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCCAATGTCCTACCA 27609843 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| ||||| || ||||| | |||||||| | || | | ||||||| Sbjct 27609842 TCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGGATACCCTCCTTG 27609783 Query 42114 TCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATG 42173 || ||| ||| || | | | | || ||| ||| || || | |||||| Sbjct 27609782 TCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACCTCCAAAGTGATG 27609723 Query 42174 GTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || || |||||||||||||| ||||| Sbjct 27609722 GTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 27609688 Score = 96.9 bits (106), Expect = 4e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||| || || ||||| | ||||| || | ||| |||||| ||||| ||||| ||||| Sbjct 10549392 ACCACCCCTCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGC 10549333 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 || || || | || ||||||||||||||||| || || || | ||| || || | ||| Sbjct 10549332 AAGTGTACGACCATCCTCTAGCTGCTTACCAGCAAAGATAAGCCTCTGTTGATCTGGTGG 10549273 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | | || || || ||| || |||| | | | |||||| |||||| Sbjct 10549272 GATTCCTTCTTTATCTTGGATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTTTCCAC 10549213 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || | |||||||| ||||| || || ||||| || || |||||||| Sbjct 10549212 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 10549165 Score = 91.5 bits (100), Expect = 2e-13 Identities = 148/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 |||||||| | || |||||||||||| ||||| || || || |||| | || || Sbjct 10550285 ACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCAAGTGTCCTGCCATCCTCA 10550226 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 ||||||||||| ||||| || | | ||| ||||| | || | | ||||||||| | Sbjct 10550225 AGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTTGTCCTGG 10550166 Query 42120 ATTTTTTGTTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTT 42176 ||||| |||| | | | ||||| |||| || || || | ||||||||| Sbjct 10550165 ATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTC---TCAACTTCCAAGGTGATGGTT 10550109 Query 42177 TTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || ||||| ||||| || ||||| Sbjct 10550108 TTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 10550077 >seq8 Length=57128820 Score = 111 bits (122), Expect = 2e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 |||||| || | ||| | ||| | ||| | ||| ||||| || || ||||| || || Sbjct 38526373 ACCTCCCCTAAGACGGAGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGC 38526314 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGG 42100 | || || |||| || |||||||| || || || ||||| ||||| ||||||| ||| Sbjct 38526313 TAAGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGG 38526254 Query 42101 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 42160 | || ||||||||| ||| || ||||| | | | |||||| || || || Sbjct 38526253 GATGCCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAAC 38526194 Query 42161 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 || | || ||||| || |||||||| || || || ||||||||||| || Sbjct 38526193 CTCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 38526143 >seq6 Length=51074515 Score = 104 bits (114), Expect = 3e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 || || || || || ||||| || || ||||| |||| || ||||| || |||||||| Sbjct 42745164 TCTTTCTGGATGTTATAATCGGCAAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAAA 42745105 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||||| ||| | | |||||||| ||| || |||| ||| Sbjct 42745104 ATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 42745046 Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | |||||| ||| || |||| || ||||| ||||| || || || || || Sbjct 42745045 GTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCAC 42744986 Query 42197 AAAGATTTGCATTTTC 42212 |||||| ||||| ||| Sbjct 42744985 AAAGATCTGCATCTTC 42744970 Score = 98.7 bits (108), Expect = 1e-15 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| ||||| |||||||||| |||| | | || || | || || |||||||| Sbjct 42745392 TCCTTTTGGATATTATAATCAGCCAAGGTCCTCCCATCTTCCAATTGTTTGCCAGCGAAG 42745333 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | ||||| ||||| | ||| | || |||||||| ||| | || | | | ||| Sbjct 42745332 ATCAAACGCTGTTGGTCAGGTGGGATGCCTTCCTTGTCT-TGAATCTTGGCCTTAACGTT 42745274 Query 42138 GCC-ACCGTGTCG---CTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | | |||||| ||| || || |||| |||||||| ||||| |||| || || Sbjct 42745273 GTCGATGGTGTCGGAACTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTT 42745217 Query 42194 TACAAAGATTTGCAT 42208 |||||||||||||| Sbjct 42745216 GACAAAGATTTGCAT 42745202 >seq13 Length=58321163 Score = 100 bits (110), Expect = 3e-16 Identities = 153/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| || | |||| |||||| || || ||||||||||||| || || | || || Sbjct 44437423 CACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAGCCAATGTGCGGCCATCCTC 44437482 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCAT 42118 || |||||||||||||| || || | |||||||| | || | || ||||||||| | Sbjct 44437483 AAGTTGCTTACCAGCGAAGATCAGCCTTTGCTGGTCTGGGGGGATGCCTTCCTTGTCC-T 44437541 Query 42119 GATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGG 42174 || | || | |||| | | | ||| || ||| ||||| || | ||||||| Sbjct 44437542 GAATCTTGGCCTTGACATTGTCAATCGTATCAGAACTC---TCCACCTCCAATGTGATGG 44437598 Query 42175 TTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 | || || || || ||||| ||||| |||||||| Sbjct 44437599 TCTTTCCGGTGAGGGTCTTGACAAAAATTTGCAT 44437632 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 ||| | |||||| || | ||| |||||| || ||||| || |||||||| || || | Sbjct 44437189 ACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCCAGGGTACGGCC 44437248 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || || ||||||||||| || || || | ||| ||||| | || | | |||||| Sbjct 44437249 ATCCTCCAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGGTCTGGGGGGATTCCCTCCTT 44437308 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGA--TTCCACATCGACCGTG 42170 |||| ||| |||||| | | | | | || | || || | || || || | || Sbjct 44437309 GTCC-TGAATTTTTGCCTTAACATTGTCAATG-GTATCTGAACTCTCTACCTCCAATGTA 44437366 Query 42171 ATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||||| || || || | ||||| ||||| ||||||||| Sbjct 44437367 ATGGTCTTCCCAGTCAAAGTCTTAACAAAAATTTGCATT 44437405 Score = 86.0 bits (94), Expect = 7e-12 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059 ||||| || | ||| |||||| || || |||||||| || || |||| | | || ||| Sbjct 44436968 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTCCTCCCATCCTCT 44437027 Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119 |||||||| ||||| ||||| || | ||||||||| | || | | ||||| | | || Sbjct 44437028 AGCTGCTTTCCAGCAAATATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTAT-CTTG 44437086 Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGT 42175 | |||| | || | | | | ||||| |||| || || || | |||||||| Sbjct 44437087 AATTTTGGCCTTAACATTATCGATTGTGTCAGAGCTC---TCAACTTCCAGGGTGATGGT 44437143 Query 42176 TTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || || ||||| ||||| || ||||| Sbjct 44437144 CTTCCCGGTAAGTGTCTTCACAAAAATCTGCAT 44437176 >seq9 Length=70713020 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || ||||| ||||| ||||| || || | || || ||||| || || ||||| Sbjct 65273828 TCCTTCTGGATATTATAATCGGCCAGGGTACGGCCATCTTCGAGCTGTTTGCCGGCGAAG 65273769 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||||||||| | ||| | || |||||||| |||||| |||| | Sbjct 65273768 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTGACATTG 65273709 Query 42138 GCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 42194 | | ||||| |||| || || |||| |||||||| ||||| |||| || || Sbjct 65273708 TCGATGGTGTCGGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTG 65273652 Query 42195 ACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 65273651 ACGAAGATCTGCAT 65273638 Score = 93.3 bits (102), Expect = 5e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || |||||||| |||| || || |||| || ||||| || || ||||| Sbjct 65273600 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 65273541 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 ||||| ||||||||||| | ||| | || ||||||| | ||| |||| | || | | Sbjct 65273540 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGT-CTTGAATTTTAGACTTTACATT 65273482 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| || || |||| |||||||| ||||| |||| || || Sbjct 65273481 ATCGATGGTGTCAGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAAGTTTT 65273425 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 65273424 GACGAAGATCTGCAT 65273410 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/219 (70%), Gaps = 8/219 (4%) Strand=Plus/Plus Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053 |||| ||||||||||| || ||||||||| || || ||||| || || |||| | | Sbjct 66888205 CGCAGCACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCTAGTGTCCTCCCA 66888264 Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113 || || |||||||| || || || || || | |||||| || | ||| | | ||||||| Sbjct 66888265 TCCTCGAGCTGCTTTCCGGCAAAAATCAGCCTCTGCTGATCTGGTGGAATACCCTCCTTG 66888324 Query 42114 TCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCGACCGT 42169 ||| ||| | || | || | | | | || || ||| ||||| || | || Sbjct 66888325 TCC-TGAATCTTGGCCTTAACATTATCAATGGTATCAGAACTC---TCCACCTCCAAAGT 66888380 Query 42170 GATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 ||||||||| || || || || |||||||| || ||||| Sbjct 66888381 GATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 66888419 Score = 89.7 bits (98), Expect = 6e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || |||||||| |||| || || |||| || ||||| || || ||||| Sbjct 65273372 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 65273313 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136 || || ||||||||||| | ||| | || ||||||| | ||| |||| | || | | Sbjct 65273312 ATAAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGT-CTTGAATTTTAGACTTCACATT 65273254 Query 42137 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 | | ||||| |||| || || |||| |||||||| ||||| |||| || || Sbjct 65273253 ATCGATGGTGTCGGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTT 65273197 Query 42194 TACAAAGATTTGCAT 42208 || ||||| ||||| Sbjct 65273196 GACGAAGATCTGCAT 65273182 Score = 86.0 bits (94), Expect = 7e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 41982 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 42041 ||||||| | || || |||||||||| || |||||||| || || || || || Sbjct 66881355 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 66881414 Query 42042 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGC 42101 || |||| | | || || |||||||| || || || || | | ||||||||| | || Sbjct 66881415 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 66881474 Query 42102 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTC---GCTCGATTC 42157 | | |||||||||| ||| |||| | ||||| | | | ||||| |||| || Sbjct 66881475 ATCCCCTCCTTGTCC-TGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTC---TC 66881530 Query 42158 CACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || | ||||||||||| || || | ||||| || || || ||||| Sbjct 66881531 GACCTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 66881581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543205778974560