Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq6 125 5e-24 seq2 111 1e-19 seq9 109 4e-19 seq13 95.1 9e-15 seq8 87.8 1e-12 seq11 82.4 5e-11 >seq6 Length=51074515 Score = 125 bits (138), Expect = 5e-24 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 14962 CTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGC 15020 || ||||| | |||||||| || || ||||| || || ||||| || || | ||| | Sbjct 42745416 CTCAAAACAAGGTGAAGGGTGGATTCCTTTTGGATATTATAATCAGCCAAGG-TCCTCCC 42745358 Query 15021 GTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTT 15080 ||||| ||||||||||||||| | ||||||||||||||||| ||| || |||||||| Sbjct 42745357 ATCTTCCAATTGTTTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGGATGCCTTCCTT 42745298 Query 15081 GTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAAT 15140 ||| ||| ||| || || | || || || ||| | | || || || | ||| || Sbjct 42745297 GTCTTGAATCTTGGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACTTCGAGGGTGAT 42745238 Query 15141 GGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || || || | ||||| ||||| |||||||| Sbjct 42745237 GGTCTTGCCGGTTAAGGTTTTGACAAAGATTTGCAT 42745202 Score = 109 bits (120), Expect = 4e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||||||||| ||||| || ||||| ||||| | | | ||| | ||||| |||||| Sbjct 42745632 TGAAGGGTAGACTCTTTCTGAATGTTATAATCAGCCAAAGTCCTCCCATCTTCCAATTGT 42745573 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TTT 15092 ||||| || | || | | || || || ||| ||||||||||| || ||| ||| Sbjct 42745572 TTGCCGGCAAAGATGAGCCTTTGCTGATCAGGTGGGATTCCTTCCTTATCCTGAATCTTT 42745513 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || || ||| | || || |||||| |||| || || ||||| || ||||| || || Sbjct 42745512 GC-CTTAACATTGTCAATGGTATCGGAGCTTTCAACCTCCAAGGTGATTGTTTTGCCGGT 42745454 Query 15153 CAGAGTTTTTACAAAAATTTGCAT 15176 || ||| || |||||||| ||||| Sbjct 42745453 CAAAGTCTTGACAAAAATCTGCAT 42745430 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| || || | | ||| || | || ||||| || ||||| || ||||| |||||| Sbjct 42745202 TGCCCCCACGAAGGCGTAAGACGAGGTGGAGGGTGGATTCTTTCTGGATGTTATAATCGG 42745143 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | ||||||| | |||||||||||| | || | |||||| |||||| || Sbjct 42745142 CAAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAAAATGAGACGCTGCTGGTCGGGTG 42745083 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || ||||||||||| || ||| || || | || || || ||| |||| | Sbjct 42745082 GGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAGCTTTCGA 42745023 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 | || | || ||||| || || || || ||||| ||||| || ||||| || Sbjct 42745022 CCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCACAAAGATCTGCATCTT 42744971 >seq2 Length=62769430 Score = 111 bits (122), Expect = 1e-19 Identities = 152/207 (73%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTCTAATT 15031 ||| || ||||| || || || || ||||| || ||| ||| ||| |||| || || | Sbjct 10572321 ATGCAGAGTAGACTCCTTCTGGATATTGTAGTCAGCT-AGAGTTCGACCGTCCTCCAACT 10572263 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-T 15090 | || ||||| | ||||| | ||| || || |||||||| |||||||| ||| | Sbjct 10572262 GCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTGAATCT 10572203 Query 15091 TTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCT 15150 |||||||| ||| | || || ||||| | | || || || |||||||| || || ||| Sbjct 10572202 TTGCTTTT-ACATTGTCAATCGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTTCCT 10572144 Query 15151 GTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || ||||||||||||||| Sbjct 10572143 GTGAGGGTCTTCACAAAAATTTGCATA 10572117 Score = 105 bits (116), Expect = 5e-18 Identities = 150/211 (71%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| ||||| ||||| || || ||||| |||||||| || || | || | || || Sbjct 10550286 AACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCAAGTGTCCTGCCATCCTC 10550227 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || || || ||| | ||||| | ||||||||| || || ||||||||||| Sbjct 10550226 AAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTTGTCCTG 10550167 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 |||||| || ||| | || ||||| ||| | || || || ||||| |||||||| Sbjct 10550166 GATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACTTCCAAGGTGATGGTTTT 10550107 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || |||||||| |||||| Sbjct 10550106 CCCGGTAAGAGTCTTCACAAAAATCTGCATA 10550076 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| ||||| || || ||||| ||||||||||| |||| | | | ||||| Sbjct 10550057 ACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGCGAGAGTGCGGCCATCTTCA 10549998 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | ||| || || || | ||||| | ||||||||| ||||| || |||||||| Sbjct 10549997 AGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGG 10549938 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| | || || ||||| | | || || || || |||||||| || Sbjct 10549937 ATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAATGGTCTTT 10549878 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || ||||| || ||||| ||||||||| Sbjct 10549877 CCGGTAAGAGTCTTCACAAATATTTGCATA 10549848 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || ||||| |||||||| || ||||| ||||| || || || |||| | ||| Sbjct 10572101 AACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGCAAGGGTTCTGCCATCT 10572042 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | ||||| ||||| | || || | ||| ||||| ||| || || |||||||| Sbjct 10572041 TCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCC 10571982 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| ||| || || | || || ||||| | | || || ||||| || |||||| Sbjct 10571981 TGAATCTTGGCCTTAACGTTATCAATTGTATCAGAACTCTCCACCTCTAAAGTGATGGTT 10571922 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || ||||||||||| || ||||| Sbjct 10571921 TTTCCAGTGAGCGTTTTTACAAAGATCTGCAT 10571890 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | || || || ||||||||||| || ||||| || ||||| ||| Sbjct 27609914 CCACCACGCAGCCGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCC 27609855 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | || | ||||| | || |||||||| | || | | || ||||| || Sbjct 27609854 AATGTCCTACCATCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGG 27609795 Query 15070 ATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 || || |||||||| || ||||| || ||| | || || |||||| | |||| || Sbjct 27609794 ATACCCTCCTTGTCTTGGATCTTTGC-CTTCACATTGTCAATGGTATCGGAACTTTCAAC 27609736 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || || || ||||| |||||||| || |||||| Sbjct 27609735 CTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCATA 27609687 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || ||||| ||||| || || ||||| |||||||| || || | | | |||||| Sbjct 10549829 ACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCTTCT 10549770 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 ||||| || ||||| | ||||| | ||| ||||| ||||| || |||||||| Sbjct 10549769 AATTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGG 10549710 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 || || || ||| | || || ||||| | | || || || || ||||| || || Sbjct 10549709 ATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTT 10549650 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || |||| || || ||||| |||||||| Sbjct 10549649 CCGGTCAAGGTCTTAACAAAGATTTGCAT 10549621 Score = 86.0 bits (94), Expect = 4e-12 Identities = 162/237 (68%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| || || | || | ||| || |||||||| || ||||| || |||||||| ||| Sbjct 27609232 TGCCGCCACGAAGTCGAAGAACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAGTCGG 27609173 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 || | | | || || | |||||||||||| |||| | | ||| || || || Sbjct 27609172 CTAGCGTGCGGCCATCCTCAAGTTGTTTGCCAGCAAATATAAGCCTCTGCTGATCCGGTG 27609113 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || |||||||| || || || || ||| | || || || || | | || | Sbjct 27609112 GGATCCCTTCCTTATCTTGGATCTTAGCCTTCACATTATCAATGGTGTCTGAACTCTCCA 27609053 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATAT-TTGAA 15183 | || | ||| ||||| || || || || ||||| ||||| |||||||| | ||||| Sbjct 27609052 CCTCGAGGGTGATGGTCTTGCCAGTGAGGGTTTTAACAAAGATTTGCATCTATTGAA 27608996 Score = 82.4 bits (90), Expect = 5e-11 Identities = 160/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-G 15006 |||||||||| | | | || | || ||||| || |||||||| || |||||||| | Sbjct 27609460 TGCCACCTCGAAGACGAAGTACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCAG 27609401 Query 15007 CTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066 || || | | | ||||| | || || ||||| | || | | ||| || || | Sbjct 27609400 CTAAGG-TGCGACCATCTTCAAGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGT 27609342 Query 15067 GGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 || || ||||||||||| || ||||| |||||| | || || || || |||| Sbjct 27609341 GGGATCCCTTCCTTGTCTTGGATCTTTGC-CTTTACATTATCAATTGTGTCAGAGCTTTC 27609283 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || |||||||| || || || || ||||| || ||||| |||||||| Sbjct 27609282 AACCTCCAAGGTAATTGTCTTTCCAGTGAGAGTCTTGACAAAGATTTGCAT 27609232 >seq9 Length=70713020 Score = 109 bits (120), Expect = 4e-19 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || |||||||| ||||| || ||||||||||| || | || | ||||| | |||| Sbjct 66882063 TGGAGGGTAGACTCTTTCTGGATGTTGTAATCTGCAAGTGTCCTACCATCTTCGAGTTGT 66882122 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || || | ||||| | ||| || || |||||| ||||||||||| || ||| Sbjct 66882123 TTTCCGGCAAAAATCAACCTCTGCTGATCTGGTGGAATCCCTTCCTTGTCTTGGATCTTG 66882182 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || ||||||||| | || || || | ||| ||||| ||||| || Sbjct 66882183 GCCTTGACATTATCGATAGTATCGGAGCTCTCCACCTCAAGGGTGATGGTCTTACCAGTA 66882242 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||||||||| || ||||| Sbjct 66882243 AGGGTTTTTACAAAGATCTGCAT 66882265 Score = 107 bits (118), Expect = 1e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 ||||||| || | | ||| || ||||| ||||| || || || || ||||| || || Sbjct 66881809 TGCCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCG 66881868 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| ||| | ||||| | || || ||||| | ||||| | ||| ||||| || Sbjct 66881869 CAAGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTG 66881928 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 | || |||||||| || ||| ||| || ||| | || || ||||| | | || | Sbjct 66881929 GGATCCCTTCCTTATCCTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCA 66881988 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | || || ||||| ||||| || || || |||||||||||||| ||||| Sbjct 66881989 CCTCCAACGTAATAGTTTTTCCGGTGAGGGTTTTTACAAAAATCTGCAT 66882037 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | || | || || || |||||||| ||||| || || || ||||| Sbjct 66881583 CCTCCTCGAAGTCGGAGCACCAAGTGGAGGGTAGACTCTTTCTGGATATTATAATCTGCA 66881642 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | || | ||||| | ||||||||||| | ||||| | ||| || || |||| Sbjct 66881643 AGTGTCCTACCATCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGA 66881702 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| || || ||||||| | || || || || | | || || Sbjct 66881703 ATCCCTTCCTTGTCCTGGATCTTAGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACT 66881762 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| || || || || ||||| || |||||||||||||| Sbjct 66881763 TCCAAAGTAATAGTCTTTCCGGTGAGAGTCTTCACAAAAATTTGCAT 66881809 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCT 15008 ||||| |||| || | || ||||| ||||| || || ||||| ||||| ||||| ||| Sbjct 66888193 CCACCACGCAGTCGCAGCACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCT 66888252 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | ||| | || || | || || || || | |||| | ||| || || ||| Sbjct 66888253 -AGTGTCCTCCCATCCTCGAGCTGCTTTCCGGCAAAAATCAGCCTCTGCTGATCTGGTGG 66888311 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||| || |||||||| ||| ||| || ||| | || || ||||| | | || || Sbjct 66888312 AATACCCTCCTTGTCCTGAATCTTGGCCTTAACATTATCAATGGTATCAGAACTCTCCAC 66888371 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||||||| || || || ||||||||||| || ||||| Sbjct 66888372 CTCCAAAGTGATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 66888419 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || |||||||| ||||| || ||||||||||| ||| ||| | ||||| | ||| Sbjct 66882291 TGGAGGGTAGACTCTTTCTGGATGTTGTAATCCGCAAGAGTTCGGCCATCTTCAAGCTGT 66882350 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || || | || | | ||||||||| ||| || ||||||||||| || ||| Sbjct 66882351 TTACCGGCAAAGATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTG 66882410 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || |||||| | |||| || || | ||| || || || || || Sbjct 66882411 GCCTTGACATTATCAATTGTATCGGAACTTTCCACCTCGAGGGTGATAGTCTTGCCAGTA 66882470 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 |||||||| || || || ||||| Sbjct 66882471 AGAGTTTTCACGAATATCTGCAT 66882493 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | || |||||| ||||| ||||| || || ||||| ||||| || || Sbjct 66881355 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 66881414 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | ||| | || || | || || || || | ||||| | ||| ||||| ||| Sbjct 66881415 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 66881474 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || || |||||||| |||||| ||| ||| | || || || || | || || Sbjct 66881475 ATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGACC 66881534 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| ||||||||||| |||| || || || || || ||||| Sbjct 66881535 TCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 66881581 Score = 87.8 bits (96), Expect = 1e-12 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || |||||||| || || || |||||||||||| | | | |||| || | ||| Sbjct 65273156 TGGAGGGTAGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGT 65273097 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | |||||| ||||| ||| || ||||||||||| |||||| Sbjct 65273096 TTTCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTA 65273037 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || || || | | || || || | ||| ||||| || || || Sbjct 65273036 GACTTCACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTA 65272977 Query 15154 AGAGTTTTTACAAAAATTTGCATATTTG 15181 || ||||| || || || ||||| |||| Sbjct 65272976 AGGGTTTTGACGAAGATCTGCATCTTTG 65272949 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATC-G 15006 |||| || || | || ||||| | |||||||| || || || || ||||| ||||| | Sbjct 65274094 TGCCTCCACGAAGCCTCAAAACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCAG 65274035 Query 15007 CTGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066 | || | ||| | || || | || || || || | |||||||| |||||||| Sbjct 65274034 CCAAGG-TCCTCCCATCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGGC 65273976 Query 15067 GGAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 || || ||||||||||| ||| || |||||| | || || || || | | || Sbjct 65273975 GGGATCCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATGGTGTCCGAACTCTCC 65273916 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || ||||| ||||| || || |||| ||||| || || || ||||| Sbjct 65273915 ACCTCCAAGGTGATGGTCTTGCCGGTCAAGGTTTTCACGAAGATCTGCAT 65273866 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || || ||||| ||||| || ||||||||||| ||| | | | ||||| | |||| Sbjct 66888445 TGGAGCGTAGACTCTTTCTGGATGTTGTAATCAGCGAGGGTCCGGCCATCTTCAAGTTGT 66888504 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || || | || | | ||||||||| || || ||||||||||| || ||| Sbjct 66888505 TTACCTGCAAAGATAAGCCTCTGTTGGTCTGGAGGGATCCCTTCCTTGTCTTGGATCTTG 66888564 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 || ||| | || || ||||| | |||| || || | ||| ||||| || || || Sbjct 66888565 GCCTTGACATTATCAATCGTATCAGAACTTTCCACCTCGAGGGTGATGGTCTTGCCAGTA 66888624 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 || ||||| ||||| || ||||| Sbjct 66888625 AGGGTTTTCACAAATATCTGCAT 66888647 Score = 86.0 bits (94), Expect = 4e-12 Identities = 145/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATC-GCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||||| || ||||| || ||||| ||||| ||| | | | ||| | || || ||||| Sbjct 65274296 TGAAGGGTGGACTCTTTCTGAATGTTATAATCAGCTAA-AGTCCTCCCATCCTCCAATTG 65274238 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAAT-TT 15091 |||||||| | || | | || || || || || ||||||||||| ||| || Sbjct 65274237 CTTGCCAGCAAAGATGAGCCTTTGCTGATCTGGGGGGATACCTTCCTTGTCCTGAATCTT 65274178 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 ||| || ||| | || || ||||| | |||| || || || || || ||||| || | Sbjct 65274177 TGC-CTTCACATTGTCAATTGTATCCGAACTTTCCACCTCCAATGTGATTGTTTTCCCAG 65274119 Query 15152 TCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || || || ||||| ||||| Sbjct 65274118 TCAATGTCTTAACGAAAATCTGCAT 65274094 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 || ||||| || || || || |||||||||||| | | | |||| || | ||| Sbjct 65273612 TGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGT 65273553 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 ||||| ||| | || | |||||| ||||| ||| || ||||||||||| |||||| Sbjct 65273552 TTGCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTA 65273493 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 |||||| | || || || || | || || || | ||| ||||| || || || Sbjct 65273492 GACTTTACATTATCGATGGTGTCAGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTT 65273433 Query 15154 AGAGTTTTTACAAAAATTTGCATA 15177 | |||||| || || || |||||| Sbjct 65273432 AAAGTTTTGACGAAGATCTGCATA 65273409 >seq13 Length=58321163 Score = 95.1 bits (104), Expect = 9e-15 Identities = 166/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | ||||| | || ||||| || || || || || || |||||||| || Sbjct 44437862 CCACCCCTCAATCGGAGGACCAAATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCAGCA 44437921 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | ||||| ||||| | || | | ||||||||| ||| Sbjct 44437922 AGGGTACGGCCATCCTCCAGCTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCTGGTGGG 44437981 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| || ||| | |||||| | || || ||||| | |||| || Sbjct 44437982 ATCCCTTCCTTGTCTTGGATCTTGGTCTTTACATTGTCGATGGTATCAGAACTTTCCACC 44438041 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCA--TATTTGAAATAA 15187 || | ||| ||||| || || || || || || || |||||||||| ||||| ||||| Sbjct 44438042 TCAAGGGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAAATTTGCATCTATTTTGAATAA 44438101 Query 15188 A 15188 | Sbjct 44438102 A 44438102 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| | ||||| | || ||||| || || || || || || |||||||| || Sbjct 44437634 CCACCCCTCAATCGGAGGACCAAATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCAGCA 44437693 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | || || | |||||| ||||| | || | | ||| ||||| ||| Sbjct 44437694 AGGGTACGGCCATCCTCCAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 44437753 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| || ||| |||||| | || || ||||| | |||| || Sbjct 44437754 ATCCCTTCTTTGTCTTGGATCTTGGCCTTTACATTGTCGATGGTATCAGAACTTTCCACC 44437813 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| ||||| || || || || || || ||||||||||||||| Sbjct 44437814 TCAAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACAAAAATTTGCATA 44437861 Score = 86.0 bits (94), Expect = 4e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 || || | ||| || ||||| | |||| | ||||||||| || ||||| |||||| Sbjct 44437250 TCCTCCAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGGTCTGGGGGGATTCCCTCCTTG 44437309 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || |||||| || ||| | || || ||||| | | ||||| || || |||||| Sbjct 44437310 TCCTGAATTTTTGCCTTAACATTGTCAATGGTATCTGAACTCTCTACCTCCAATGTAATG 44437369 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || |||| ||| || |||||||||||||| Sbjct 44437370 GTCTTCCCAGTCAAAGTCTTAACAAAAATTTGCAT 44437404 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| || || ||||| || || || || ||||||||||| || | ||| | || || Sbjct 44436967 AACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCTGCAAGGGTCCTCCCATCCTC 44437026 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 || || || ||||| |||||| | ||| ||||| || || |||||||| || Sbjct 44437027 TAGCTGCTTTCCAGCAAATATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTATCTTG 44437086 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||||||| || ||| | || || || || | || || || | ||| ||||| || Sbjct 44437087 AATTTTGGCCTTAACATTATCGATTGTGTCAGAGCTCTCAACTTCCAGGGTGATGGTCTT 44437146 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || || || |||||||| |||||| Sbjct 44437147 CCCGGTAAGTGTCTTCACAAAAATCTGCATA 44437177 >seq8 Length=57128820 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCG-CTGAGAATTCTCGCGTCTTCTAATT 15031 ||| ||||| || || || || |||||||| ||| || || | | |||| || | | Sbjct 38526349 ATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCTAAGG-TGCGGCCGTCCTCGAGCT 38526291 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTT 15091 | ||||| || | || | |||||||||||| ||| || || |||||||| || | Sbjct 38526290 GCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCT 38526231 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 || ||| ||| | || || || ||| | || || |||| ||| ||||| || || | Sbjct 38526230 TGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTTATGGTCTTCCCCG 38526171 Query 15152 TCAGAGTTTTTACAAAAATTTGCATATTTG 15181 | || ||||| || || |||||||| |||| Sbjct 38526170 TTAGGGTTTTGACGAAGATTTGCATCTTTG 38526141 >seq11 Length=62681010 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || || ||||| || |||||||| | | | || | ||||| | ||| Sbjct 1163249 TGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAGCTGT 1163308 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || ||||| | ||||| | || || || |||||||||||| ||||| ||| || Sbjct 1163309 TTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTC 1163368 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| || | || || ||||| | || || ||||| ||||| || ||||| ||| Sbjct 1163369 GCTTTCACGTTATCAATCGTATCCGAGCTCTCCACTTCTAAAGTAATCGTCTTACCGGTC 1163428 Query 15154 AGAGTTTTTACAAAAATTTGCAT 15176 | ||| || || || || ||||| Sbjct 1163429 AAAGTCTTGACGAAGATCTGCAT 1163451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357387496190690