Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq8 131 2e-25 seq1 131 2e-25 seq11 113 5e-20 seq9 113 5e-20 seq4 98.7 1e-15 seq6 96.9 4e-15 seq7 95.1 1e-14 seq2 95.1 1e-14 >seq8 Length=57128820 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||| || | ||| | ||| ||||| | || ||||| ||||| |||||||||| | Sbjct 38526372 CCTCCCCTAAGACGGAGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCT 38526313 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||||| |||| ||||||||||||||||| || || | |||||| ||||||| || Sbjct 38526312 AAGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGG 38526253 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || ||||||||| |||||| |||| | | | |||||| || || || Sbjct 38526252 ATGCCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACC 38526193 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || | || ||||| || ||||| || ||||| || ||||||||||| || Sbjct 38526192 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATCTT 38526143 >seq1 Length=55868233 Score = 131 bits (144), Expect = 2e-25 Identities = 148/196 (76%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||||| || ||||| |||| ||||||||||| |||||||| Sbjct 19916795 TCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGCTGCTTCCCGGCGAAG 19916854 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||| ||||||| || | || ||||||||| |||||| ||||| ||| Sbjct 19916855 ATAAGGCGCTGTTGGTCGGGTGGGATGCCCTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 19916913 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | || ||| || || || || | || ||||| || |||||||| ||||| || Sbjct 19916914 GTCGATTGTATCGGAGGACTCAACCTCTAAGGTTATGGTCTTCCCCGTCAGGGTTTTGAC 19916973 Query 46582 AAAGATTTGCATTTTG 46597 ||||| ||||| ||| Sbjct 19916974 GAAGATCTGCATCTTG 19916989 >seq11 Length=62681010 Score = 113 bits (124), Expect = 5e-20 Identities = 142/195 (73%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| |||||||||||||||| || ||||| |||| || |||||||| |||||||| Sbjct 3842821 TCCTTCTGGATATTGTAGTCGGCTAAGGTGCGGCCGTCTTCAAGCTGCTTCCCGGCGAAG 3842880 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||| || || |||| || | || |||||||| |||||| |||| | Sbjct 3842881 ATAAGGCGTTGTTGATCGGGAGGGATGCCTTCCTTGTCTTGGATCTTGGCTTTGACATTG 3842940 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || || || || | || |||||||| ||||| || ||||| || Sbjct 3842941 TCGATGGTGTCGGAAGACTCGACCTCAAGGGTTATGGTTTTCCCCGTTAGGGTTTTGACG 3843000 Query 46583 AAGATTTGCATTTTG 46597 ||||| ||||| ||| Sbjct 3843001 AAGATCTGCATCTTG 3843015 Score = 109 bits (120), Expect = 6e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || |||| | ||| | |||||||| | || ||||| ||||||||||| |||| | Sbjct 1163453 CCACCTCGAAGACGTAGAACCAGATGAAGAGTCGATTCCTTCTGGATATTGTAATCGGCT 1163512 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 | ||| ||| |||| ||||| ||||| |||||||| || | || |||||||| | ||| Sbjct 1163513 AAAGTCCGCCCGTCCTCGAGTTGCTTTCCGGCGAAGATGAGACGTTGCTGGTCTGGCGGG 1163572 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | || |||||||| ||| || ||| ||| | | | |||||| |||| || Sbjct 1163573 ATGCCTTCCTTGTCTTGGAT-TTTGGCTTTCACGTTGTCGATCGTGTCAGAGCTC---TC 1163628 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | ||||| || || || || ||||| ||||| ||||||||||| Sbjct 1163629 GACCTCGAGAGTGATCGTCTTTCCGGTAAGCGTCTTAACGAAGATTTGCAT 1163679 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| | || || |||| ||||| || || |||||||| Sbjct 1163716 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCGAGTTGTTTTCCGGCGAA 1163775 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | || |||||||| | || | || |||||||| ||||||| ||| | ||| Sbjct 1163776 GATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATCTTCGCCTTAA-CGT 1163834 Query 46522 CGCC-ACCGTGTCG---CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | ||||||| ||| || || || | ||||| || ||||| |||| |||| Sbjct 1163835 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGAGTGATTGTCTTGCCGGTCAAGGTTT 1163891 Query 46578 TAACAAAGATTTGCAT 46593 | || ||||||||||| Sbjct 1163892 TCACGAAGATTTGCAT 1163907 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/200 (72%), Gaps = 8/200 (4%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| |||| | || || |||| |||||||| || |||||||| Sbjct 1163944 CTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAA 1164003 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || ||||| || ||| || ||| | ||| Sbjct 1164004 GATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTCA-CGT 1164062 Query 46522 CG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTT 46577 | | | |||||| |||| || || || | ||||| || ||||| || || || | Sbjct 1164063 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGTGTGATCGTCTTGCCGGTTAGAGTCT 1164119 Query 46578 TAACAAAGATTTGCATTTTG 46597 |||| ||||| ||||| ||| Sbjct 1164120 TAACGAAGATCTGCATCTTG 1164139 >seq9 Length=70713020 Score = 113 bits (124), Expect = 5e-20 Identities = 153/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| ||| |||||| |||||||||||||||| |||||| || | || || Sbjct 66881145 ACAAGATGCAGTGTGGACTCCTTCTGGATATTGTAGTCGGCTAGAGTTCGACCATCCTCC 66881204 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||| || || |||||||| | ||||||||| | || | | |||||||||| Sbjct 66881205 AACTGCTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGA 66881264 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 |||||| || | | | | |||||| |||| ||||| |||| ||||| ||| Sbjct 66881265 ATCTTCGCTTTCACATTGTCGATCGTGTCTGAGCTC---TCCACCTCCAGGGTGATTGTT 66881321 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || || || || ||||| Sbjct 66881322 TTCCCGGTCAAGGTCTTCACGAATATCTGCAT 66881353 Score = 100 bits (110), Expect = 3e-16 Identities = 163/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 |||||||| | ||||| |||| ||||| || ||||||||||| || ||||| | Sbjct 66887737 CCTCCTCTAAGGCGCAAAACCAAATGCAGAGTGGATTCCTTTTGGATGTTATAGTCCGCA 66887796 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | | || || |||||||| ||||| || ||||| | ||||||||| | || Sbjct 66887797 AGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 66887856 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTC 46542 | | |||||||||| ||| || ||| | | | | | | ||||| |||| || Sbjct 66887857 ATCCCCTCCTTGTCC-TGAATTTTCGCTTTAACATTGTCAATGGTGTCCGAGCTC---TC 66887912 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| || |||||||| || |||| || ||||| || || ||||| Sbjct 66887913 GACCTCCAGTGTTATGGTTTTACCAGTCAAGGTCTTAACGAATATCTGCAT 66887963 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/212 (70%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| || |||||| |||||||||||||| | || ||| || | || || Sbjct 66887527 ACAAGATGCAGAGTGGACTCCTTCTGGATATTGTAGTCTGCTAAAGTTCGACCATCCTCC 66887586 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||| || || || ||||| | ||||||||| | || | | |||||||||| Sbjct 66887587 AACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGA 66887646 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTT 46561 ||||| || | | | | |||||| |||| ||||| |||| ||||||||| Sbjct 66887647 ATCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTC---TCCACCTCCAGGGTGATGGTT 66887703 Query 46562 TTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| || || || || || ||||| Sbjct 66887704 TTCCCAGTCAAAGTCTTCACGAATATCTGCAT 66887735 Score = 91.5 bits (100), Expect = 2e-13 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | || || |||| ||||| || ||||||||||| || ||||| | Sbjct 66881355 CCTCCTCGAAGTCGTAAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCA 66881414 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | | || || |||||||| ||||| || ||||| | ||||||||| | || Sbjct 66881415 AGTGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 66881474 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | |||||||||| || ||| |||| | | | ||||| |||| || Sbjct 66881475 ATCCCCTCCTTGTCCTGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTC---TCG 66881531 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || |||| ||||||||||| || |||| || || || || || ||||| Sbjct 66881532 ACCTCCAGGGTGATGGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 66881581 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/194 (71%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| |||||||| || |||| || || || | || |||||||| ||||||||||| Sbjct 65273828 TCCTTCTGGATATTATAATCGGCCAGGGTACGGCCATCTTCGAGCTGTTTGCCGGCGAAG 65273769 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||| | || | || |||||||| ||| || ||||| | Sbjct 65273768 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTGACATTG 65273709 Query 46523 GCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 | | ||||| |||| || || || | |||||||| ||||| || | ||||| Sbjct 65273708 TCGATGGTGTCGGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTG 65273652 Query 46580 ACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 65273651 ACGAAGATCTGCAT 65273638 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/231 (68%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | |||| |||| |||| || |||||||||||| || || || | Sbjct 66887965 CCTCCTCGAAGGCGCAGAACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCA 66888024 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | | || ||||| ||||| || || || ||||| | ||||||||| | || Sbjct 66888025 AGCGTCCTCCCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGG 66888084 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTC---GCTCGATTCC 46543 | | ||||||||| |||||| ||| | | | | ||||| ||| ||| Sbjct 66888085 ATACCCTCCTTGTCTTGGATCTTGGCCTTCACGTTATCAATTGTGTCTGAACTC---TCC 66888141 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATT 46594 || |||| || || ||||| || |||| ||||| ||||| || |||||| Sbjct 66888142 ACCTCCAATGTAATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 66888192 >seq4 Length=62178258 Score = 98.7 bits (108), Expect = 1e-15 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||||| || ||||| |||| ||||| ||||| |||||||| Sbjct 4510735 TCCTTTTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGTTGCTTACCGGCGAAG 4510676 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||| || ||||| | || | || || ||||| |||||| |||| | Sbjct 4510675 ATGAGGCGTTGTTGGTCCGGGGGTATGCCTTCTTTGTCTTGGATCTTGGCTTTGACATTA 4510616 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || || || || | || ||||| || || || || ||||| || Sbjct 4510615 TCGATTGTGTCGGAAGACTCGACCTCTAGGGTTATGGTCTTCCCGGTTAGGGTTTTCACG 4510556 Query 46583 AAGATTTGCATT 46594 ||||| |||||| Sbjct 4510555 AAGATCTGCATT 4510544 >seq6 Length=51074515 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || || ||||| || || |||| || || || |||| |||||||| ||||| ||||| Sbjct 42745164 TCTTTCTGGATGTTATAATCGGCAAGGGTCCGACCGTCTTCGAGCTGTTTGCCAGCGAAA 42745105 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||||||||||| || | | |||||||| |||||| ||||| ||| Sbjct 42745104 ATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTT 42745046 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| ||| || || | || ||||| ||||| || || ||||| || Sbjct 42745045 GTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTAAGGGTTTTCAC 42744986 Query 46582 AAAGATTTGCATTTT 46596 |||||| ||||| || Sbjct 42744985 AAAGATCTGCATCTT 42744971 >seq7 Length=60982465 Score = 95.1 bits (104), Expect = 1e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||||| || ||||| | || ||||| |||||||||||||| Sbjct 9403942 TCCTTCTGGATGTTGTAGTCGGCTAAGGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAG 9403883 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || || ||||| | || | || |||||||| |||||| |||| | Sbjct 9403882 ATAAGACGTTGTTGGTCAGGTGGAATGCCTTCCTTGTCTTGGATCTTAGCTTTGACATTG 9403823 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | |||||| || || || || | || || || || ||||| || ||||| || Sbjct 9403822 TCAATGGTGTCGGAAGACTCGACCTCTAGGGTTATAGTCTTCCCCGTTAGGGTTTTGACG 9403763 Query 46583 AAGATTTGCATTTTG 46597 ||||| ||||| ||| Sbjct 9403762 AAGATCTGCATCTTG 9403748 >seq2 Length=62769430 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||||||||| || | ||| ||||||||||||||||||||||| | || | | Sbjct 27609902 CGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCCAATGTCCTACCA 27609843 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498 || |||||||||||||| || || || | | |||||||| | || | | ||||||| Sbjct 27609842 TCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGGATACCCTCCTTG 27609783 Query 46499 TCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATG 46558 || |||||| ||| | | | | || ||| ||| || |||| |||||| Sbjct 27609782 TCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACCTCCAAAGTGATG 27609723 Query 46559 GTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || || |||||||| ||||| Sbjct 27609722 GTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 27609688 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| |||||||| | || ||||| | || || | ||||| || || || Sbjct 10549811 TCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCTTCTAATTGCTTACCAGCAAAG 10549752 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||||||||| | ||| | | |||||||||| |||||| ||||| | | Sbjct 10549751 ATCAACCTCTGCTGGTCTGGCGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGA-CATT 10549693 Query 46523 GCCACCGTGTCGCTCGA--TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | || | || || | || || |||| || || || || || |||| || |||| Sbjct 10549692 GTCAATG-GTATCTGAACTCTCAACCTCCAAAGTAATTGTCTTTCCGGTCAAGGTCTTAA 10549634 Query 46581 CAAAGATTTGCATT 46594 |||||||||||||| Sbjct 10549633 CAAAGATTTGCATT 10549620 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| |||||||| | || || || | || || ||||| || |||||||| Sbjct 10571397 CTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCAAGCTGTTTCCCGGCGAA 10571338 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | | ||| ||||| | || | | |||||||| |||||| ||||| | Sbjct 10571337 GATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 10571278 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||| |||||| || | |||||||| || || || || ||||| || Sbjct 10571277 ATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTACCAGTAAGAGTTTTCAC 10571218 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 10571217 AAAGATCTGCAT 10571206 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || ||||||| ||| |||||| |||||||||||||| | |||||| || |||| || Sbjct 10572326 ACAAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCGTCCTCC 10572267 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | |||||| || || || ||||| | |||||| || | || | | |||||||||| Sbjct 10572266 AACTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTGA 10572207 Query 46505 ATCTTCTTCTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGT 46560 ||||| | ||| | | | | | ||| || ||| || || |||| || || || Sbjct 10572206 ATCTT-TGCTTTTACATTGTCAATCGTATCAGAACTC---TCAACTTCCAAGGTAATAGT 10572151 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||| |||||||| Sbjct 10572150 CTTTCCTGTGAGGGTCTTCACAAAAATTTGCAT 10572118 Score = 86.0 bits (94), Expect = 7e-12 Identities = 137/193 (71%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||| || | |||||||| | || || || ||||| ||||| || Sbjct 10550039 TCCTTTTGGATGTTGTAATCAGCGAGAGTGCGGCCATCTTCAAGTTGCTTACCGGCAAAG 10549980 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 ||||| | ||| ||||| | || | | |||||||||| |||||| ||||| | | Sbjct 10549979 ATCAACCTCTGTTGGTCTGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGA-CATT 10549921 Query 46523 GCCACCGTGTCGCTCGA--TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | || | || || | || || |||| || ||||| || || || || || || | Sbjct 10549920 GTCAATG-GTATCTGAACTCTCAACCTCCAAAGTAATGGTCTTTCCGGTAAGAGTCTTCA 10549862 Query 46581 CAAAGATTTGCAT 46593 |||| |||||||| Sbjct 10549861 CAAATATTTGCAT 10549849 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/213 (69%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| ||| | || |||||||||||| ||||| || | || || || | || || Sbjct 10549602 CACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGCCAGGGTACGGCCATCTTC 10549543 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 || ||||| ||||| || || | | ||||||||| | || | | || ||||| Sbjct 10549542 TAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGGGATCCCTTCTTTGTCTTG 10549483 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGA---TTCCACATCCACCGTGATGGT 46560 |||||| ||||| | | | ||||| ||| |||||| || | ||||| || Sbjct 10549482 GATCTTGGCCTTGACATTATCAATGGTGTC---CGAGCTTTCCACCTCGAGGGTGATAGT 10549426 Query 46561 TTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || || || ||||||||||||||||| Sbjct 10549425 CTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 10549393 Score = 82.4 bits (90), Expect = 9e-11 Identities = 136/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| | || || | | || || |||||||| || ||||| Sbjct 10550268 CTCCTTTTGAATGTTGTAGTCTGCAAGTGTCCTGCCATCCTCAAGCTGCTTACCCGCGAA 10550209 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| | ||| ||||| | || | | ||||||||| ||| || ||||| | Sbjct 10550208 AATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTTGTCCTGGATTTTGGCCTTGACATT 10550149 Query 46522 CGCCACCGTGTCG---CTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| ||| || || |||| ||||||||||| || || || || || Sbjct 10550148 GTCAATAGTGTCGGAGCTC---TCAACTTCCAAGGTGATGGTTTTCCCGGTAAGAGTCTT 10550092 Query 46579 AACAAAGATTTGCAT 46593 ||||| || ||||| Sbjct 10550091 CACAAAAATCTGCAT 10550077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231094293680