Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq1034 486 6e-133 seq2 372 9e-99 seq1 306 1e-78 seq4 212 2e-50 seq3 156 1e-33 seq12 134 4e-27 seq6 109 2e-19 seq5 98.7 3e-16 seq11 80.6 8e-11 >seq1034 Length=160161 Score = 486 bits (538), Expect = 6e-133 Identities = 702/985 (71%), Gaps = 4/985 (0%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || ||||| |||||||| || | |||||||| || || | Sbjct 1445 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 1386 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| | |||||||| || || || Sbjct 1385 ATGATCCCTACCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATTGCTGCTCC 1327 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || ||||| || ||||| || || || | ||||||||||| Sbjct 1326 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 1267 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | || ||||||||||| Sbjct 1266 TATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATAGGTTTGCACTTTTACCCGAT 1207 Query 26041 CTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTA 26099 ||||||||| |||| | | || || ||| ||||||||||||| || ||| | | ||| Sbjct 1206 CTGGGAAGC-GGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGTTAATTG 1148 Query 26100 TCTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACA 26159 | || ||||||||| | || ||||| || || | |||||||||| || | Sbjct 1147 TTTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCC 1088 Query 26160 GACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCG 26219 | || || ||| | || ||||| |||||||||| |||| || | | || ||| || Sbjct 1087 GTCTGGGTATGCGCCCTTGGATCGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCG 1028 Query 26220 CAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTA 26279 | || ||||| | ||||| | || ||||| |||||| |||||| ||||| || || | Sbjct 1027 CTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCCCTAGGAA 968 Query 26280 TCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACC 26339 ||||||| ||||| ||||| ||| | |||||||| || ||||| || || || ||||| | Sbjct 967 TCTCTGGAACTTTCAACTTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCATC 908 Query 26340 CATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACG 26399 | || || ||| || || ||||| || ||||| || | || ||| ||||||||| | Sbjct 907 CGTTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 848 Query 26400 GAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATG 26459 | ||||| || || | || ||||| ||||| | | || ||| | | Sbjct 847 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 788 Query 26460 GCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTG 26519 | || | || || ||||| ||||| || |||||||| || ||||| || || || |||| Sbjct 787 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTG 728 Query 26520 GGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTG 26579 | |||| || || || ||||| ||||| || || |||||| | |||||||| | | Sbjct 727 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 668 Query 26580 CTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTA 26639 || ||||||| || || || || ||| | || || | ||||| |||| ||||| || | Sbjct 667 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCA 608 Query 26640 ACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTA 26699 ||||||| ||||| || |||||||| || ||||| ||| | | || |||| || Sbjct 607 ACCTAAACGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 548 Query 26700 CATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATG 26759 | ||||||||| | | ||||| |||||||| || | ||||||||||| || ||||||| Sbjct 547 CCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 488 Query 26760 CTCATAACTTTCCACTTGACTTAGC 26784 |||||||||| || || ||| |||| Sbjct 487 CTCATAACTTCCCTCTAGACCTAGC 463 >seq2 Length=62769430 Score = 372 bits (412), Expect = 9e-99 Identities = 633/915 (69%), Gaps = 2/915 (0%) Strand=Plus/Plus Query 25817 ACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTTATGATACCCTGCTTA 25876 || || ||| | |||||||| || | |||||||| || || | ||||| || |||| Sbjct 26980591 ACTAGCACTAAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTAATGATCCCTACCTTA 26980650 Query 25877 CTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACCGCCTGTAGATATAGA 25935 | || ||| | ||| ||||| | |||||||| || || || || ||||||| || Sbjct 26980651 TTGATCGCAACTTC-TGTATTTATTATCGCCTTCATTGCTGCTCCTCCAATAGATATTGA 26980709 Query 25936 TGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATCAGGAGC 25995 ||| || ||||| || ||||| | || || | |||||||||||||| || || ||||| Sbjct 26980710 TGGTATTCGTGAACCTGTTTCTAGATCTCTACTTTACGGAAACAATATTATTTCTGGAGC 26980769 Query 25996 AGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGCTGGCAC 26055 | | | | ||| || || || |||| |||||||||||||||||||| | | Sbjct 26980770 CATTATTCTTACTTCTGCAGCTATAGGTTTACACTTTTACCCGATCTGGGAAGCGGTATC 26980829 Query 26056 ACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAAT 26115 | || || ||| |||||||||||| || ||| | | ||| | || ||||||||| | Sbjct 26980830 TGTTGATGAATGGTTATACAATGGCGATCCTTATGAGTTAATTGTTTTACACTTCTTACT 26980889 Query 26116 AGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTAGGAATGAGACC 26175 || ||||| || || | |||||||||| || | || | ||| | || Sbjct 26980890 TGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTTCGTCTGAGTATGCGCCC 26980949 Query 26176 ATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTA 26235 || || ||||||||||| |||| || | | || ||| | | || ||||| | || Sbjct 26980950 TTGAATCGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCTACCACTGTTTTCTTGATCTA 26981009 Query 26236 TCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAA 26295 ||| | || ||| | |||||| |||||| ||||| || || |||||||| ||||| || Sbjct 26981010 TCCAATTGGCCAATGAAGTTTTTTTGATGGTATGCCCCTAGGAATCTCTGGCACTTTCAA 26981069 Query 26296 CTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGG 26355 ||| ||| | |||||| | || ||||| || || || ||||| ||||| || ||| || Sbjct 26981070 CTTCATGATTGTATTCTAGGCTGAACACAACATCCTTATGCATCCATTTCACATGTTAGG 26981129 Query 26356 TGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTC 26415 || ||||| | ||| | || | || ||| ||||||||| || ||||| || || Sbjct 26981130 CGTAGCTGGTTTATTCAGCGGCTCCCTATTCAGTGCTATGCATGGTTCCTTGGTAACCTC 26981189 Query 26416 CTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGGCA 26475 | || ||||| ||||| | | || ||| | || || || || || Sbjct 26981190 TAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTACTGATTCGGTCA 26981249 Query 26476 AGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCA 26535 ||| ||||| || |||||||| || ||||| || || || ||||| |||| || || || Sbjct 26981250 AGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTACA 26981309 Query 26536 GTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGT 26595 ||||| ||||| | || |||||| | |||||||| | ||| ||||||| || || Sbjct 26981310 ATATGCTAGTTTCAGCAATTCTCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGT 26981369 Query 26596 TGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAA 26655 || || ||| | || || | ||||| |||| ||||| || |||||||| ||||| || Sbjct 26981370 AGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAACGGTTTCAA 26981429 Query 26656 CTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTGATGTATT 26715 |||||||| || ||||| ||| | | || |||| ||| ||||||||| | | Sbjct 26981430 TTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTAT 26981489 Query 26716 AAACCGAGCTAACCT 26730 ||||| |||||||| Sbjct 26981490 TAACCGTGCTAACCT 26981504 Score = 334 bits (370), Expect = 2e-87 Identities = 669/986 (68%), Gaps = 23/986 (2%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 |||||| | ||| | || || ||||| || ||||| || | |||||||| || || | Sbjct 40943981 TTTTGTAATTGGATAACCAGCACTGAAAATCGTCTTTACATCGGATGGTTTGGTGTTTTG 40944040 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTAC-ATGTTTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| || ||| || | |||||||| |||| || Sbjct 40944041 ATGATCCCTACCTTATTGACCGCAACTTTTATATTTACTA-TCGCCTTCATTACAGCTCC 40944099 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 | ||||||| ||||| || ||||| || |||| || ||||||| Sbjct 40944100 TACAATAGATATTGATGGTATTCGTGAACCTGTTT---------------ACAGAAACAA 40944144 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| | || || | || |||||| |||| Sbjct 40944145 TATTATTTCTGGTGCCATTATTCCTACTTCTGTAGTTATAGGTTTGCACTTTTACTCGAT 40944204 Query 26041 CTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTAT 26100 | ||||||| | | | || || ||| ||||||||||||| |||||| | | ||| | Sbjct 40944205 CAGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGCGGCCCATATGAGTTAATTGT 40944264 Query 26101 CTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAG 26160 || ||||||||| | || ||||| || || | |||||||||| | | Sbjct 40944265 TTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTATCCA 40944324 Query 26161 ACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGC 26220 || || ||| | || ||||| |||||||||| || | | | | ||| | | Sbjct 40944325 TCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAACTCTTATTGTAACTGCTACCAC 40944384 Query 26221 AGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTAT 26280 || |||||| | ||||| | | | ||| |||||| |||||| ||||| || || || Sbjct 40944385 TGTTTTCTTAATCTATCCAATTAGTCGAGGAAGTTTTTCTGATGGTATGCCCCTAGGAAT 40944444 Query 26281 CTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCC 26340 |||||| ||||| || || ||| | |||||||| || ||||| || || || ||||| || Sbjct 40944445 CTCTGGCACTTTCAAATTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCATCC 40944504 Query 26341 ATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTT-TTCGCTGCTATGCACG 26399 || || ||| || || ||| | || |||||| ||||| ||| ||||||||| | Sbjct 40944505 GTTTCACATGCTAGGCGTAGCTAGTGTATTCGGT--AGCTCCCATTCAGTGCTATGCATG 40944562 Query 26400 GAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATG 26459 | ||||| || || | || ||||| ||||| | | || ||| | | Sbjct 40944563 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGAAG 40944622 Query 26460 GCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTG 26519 | ||||| ||||| || | ||||| || | |||||| || ||||| || || || |||| Sbjct 40944623 GTTATAAATTTGGTCAGTAGGAAGAAACTTCTAATATCGTAGCTGCTCATGGTTATTTTG 40944682 Query 26520 GGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTG 26579 | ||| || || || ||||| ||||| || || |||||| | |||||||| | | Sbjct 40944683 GTC-ATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTTAG 40944741 Query 26580 CTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTA 26639 || ||||||| || || || ||| | || | | ||||| |||| ||||| || | Sbjct 40944742 CTGCTTGGCCTAGAGTAGGTATCTGGTTCACCGTTTTAGGTATTAGCACTATGGCTTTCA 40944801 Query 26640 ACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAGATAATACCT 26698 ||||||| ||||| || |||||||| || |||| ||| || || | | |||| | Sbjct 40944802 ACCTAAACGGTTTCAATTTTAACCAATCCATAGTTGATAGTCAAAGTCGTG-TAATTAAT 40944860 Query 26699 ACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAAT 26758 || ||||||||| | | || | |||||||| || | ||||||||||| || |||||| Sbjct 40944861 ACCTGGGCTGATATTATTAATTGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAAT 40944920 Query 26759 GCTCATAACTTTCCACTTGACTTAGC 26784 ||||||||||| || || ||| |||| Sbjct 40944921 GCTCATAACTTCCCTCTAGACCTAGC 40944946 Score = 192 bits (212), Expect = 2e-44 Identities = 225/303 (74%), Gaps = 1/303 (0%) Strand=Plus/Plus Query 26482 AGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGC 26541 ||| || |||||||| || ||||| || || || ||||| |||| || || || ||||| Sbjct 48290110 AGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 48290169 Query 26542 GAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCAT 26601 ||||| || || |||||| | |||||||| | ||| ||||||| || || || || Sbjct 48290170 TAGTTTCAACAATTTTCGTTCT-TACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTAT 48290228 Query 26602 ATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAA 26661 ||| | || || | ||||| |||| ||||| || |||||||| ||||| || ||||| Sbjct 48290229 CTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTTAA 48290288 Query 26662 CCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCTGATGTATTAAACCG 26721 ||| || ||||| ||| | | || |||| ||| |||||| || | | ||||| Sbjct 48290289 CCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTAATATTATTAACCG 48290348 Query 26722 AGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTT 26781 |||||||| || | ||||||||||| || ||||||||||||||||| || || ||| | Sbjct 48290349 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 48290408 Query 26782 AGC 26784 ||| Sbjct 48290409 AGC 48290411 Score = 129 bits (142), Expect = 2e-25 Identities = 168/230 (73%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 26559 GTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGG 26618 ||||| | |||||||| | || |||||| || || || || ||| | || || | | Sbjct 47970470 GTTCTTTACATTTCTTCTTAACTGCTTGGCGTGTAGTAGGTATCTGGTTCACTGCTTTAG 47970529 Query 26619 GTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT- 26677 |||| | || ||||| || |||||||||||||| || |||||||| || || | ||| Sbjct 47970530 GTATTAGAACTATGGCTTTCAACCTAAATGGTTTCAATTTTAACCAATCCATATTTGATA 47970589 Query 26678 GTTAA---TGGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGC 26734 || || || | ||||||||| |||||| | | || || |||| ||| || Sbjct 47970590 GTCAAGGTTGTGTAATTAATACCTA----AGCTGATATTATTAATCGTGCTATCCTTGGT 47970645 Query 26735 TTTGAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGC 26784 | ||||||||||| || ||||||||||||||||| || ||||||||||| Sbjct 47970646 ATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTTGACTTAGC 47970695 Score = 80.6 bits (88), Expect = 8e-11 Identities = 128/181 (71%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 25945 TGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAATATCAGGAGCAGTCGTCCC 26004 ||| || ||||| | || || | |||||||||||||| || || || || | | || Sbjct 11756653 TGAACCTGTTTCTAGATCTCTACTTTACGGAAACAATATTATTTCTGGTGCCATTATTCC 11756594 Query 26005 CTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGGAAGCTGGCA-CACTGGACG 26063 | ||| || || || | || |||||||||||||||||||| |||| | || | Sbjct 11756593 TACTTCTGCAGCTATAGGTTTGCACTTTTACCCGATCTGGGAAGC-GGCATTTGTTGATG 11756535 Query 26064 AGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAG 26123 | ||| |||||||||| | || ||| | | ||| | || ||||||||| | || |||| Sbjct 11756534 AATGGTTATACAATGGTGATCCTTATGAGTTAATTGTTTTACACTTCTTACTTGGTGTAG 11756475 Query 26124 C 26124 | Sbjct 11756474 C 11756474 >seq1 Length=55868233 Score = 306 bits (338), Expect = 1e-78 Identities = 590/863 (68%), Gaps = 8/863 (1%) Strand=Plus/Plus Query 25926 TAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATAA 25985 ||||||| ||||| || ||||| || ||||| || || || | ||| ||||||||| | Sbjct 42543287 TAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACAAAAACAATATTA 42543346 Query 25986 TATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGATCTGGG 26045 | || || ||| | | || | |||| || || || | || ||||||||||||| || Sbjct 42543347 TTTCTGGTGCAATTATTCCTACTTCTACAGCTATAGGTTTGCACTTTTACCCGATCTAGG 42543406 Query 26046 AAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATTATCTTC 26104 |||| | || | | | || ||| ||||||||||| || ||| | | ||| | | Sbjct 42543407 AAGC-GACATCTATTAATGAATGGTTATACAATGGCAATCCTTATGATTTAATTGTTTAA 42543465 Query 26105 CACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATCTTACAGACTA 26164 ||||||||| | || ||||| || || | |||||||||| || | | | Sbjct 42543466 CACTTCTTACTTGGTGTAGCTTGTTACATGGGCTGTGAGTGGGAACTTAGTTTCCGTCCG 42543525 Query 26165 GGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGCTCTCGCAGTG 26224 || ||| || ||||| |||||||||| |||| | | | || ||| ||| || Sbjct 42543526 GGTATGCACCCTTGGATCGCTGTTGCATATTCAGCTCATATTGCAGCTGCTACCGCTGTT 42543585 Query 26225 TTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCT 26284 ||||| | ||||| || || ||||| ||| || |||||| ||||| || || |||||| Sbjct 42543586 TTCTTGATCTATCCATTTGGTCAAGGAAGTATTTCTGATGGTATGCCCCTAGGAATCTCT 42543645 Query 26285 GGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTC 26344 | ||||| ||||| ||| | |||||| | || ||||| || || || ||||| || || Sbjct 42543646 AGCACTTTCAACTTCATGATTGTATTCTAGGCTGAACACAACATCCTTATGCATCCGTTT 42543705 Query 26345 CATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTC--TTTTCGCTGCTATGCACGGAA 26402 | ||| | || ||||| || |||| | | ||| | ||| ||||||||| || Sbjct 42543706 CCCATGTTAGACGTAGCTGGTGTATTCG--GCAACTCCTTGTTCAGTGCTATGCATGGTT 42543763 Query 26403 GTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGAAGTCTCACAGAATTATGGCT 26462 ||||| || || | || ||||| ||||| | | || ||| | || | Sbjct 42543764 CCTTGGTAACCTCTAGTTTGATCAAGGAAACCACAGAAAATGAATCTGCTAATGAAGGTT 42543823 Query 26463 ATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGA 26522 | | || | ||||| ||||| || |||||||| || | ||| || || || ||||| Sbjct 42543824 ACAGATTCAGTCAAGAGGAAGAAACTTATAATATCGTAGTTGCTCATGGTTATTTTGGCC 42543883 Query 26523 GATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTT-GCT 26581 |||| || || || ||||| ||||| || || |||||| | ||||| |||||| ||| Sbjct 42543884 GATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTT-TTTCTTAGCT 42543942 Query 26582 ACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAAC 26641 ||||| || || || || ||| | || || | | ||| |||| ||||| || ||| Sbjct 42543943 GATTGGCATGTAGTAGGTATTTGGTTCACCGCTTTAGCTATTAGCACTATGGCTTTCAAC 42544002 Query 26642 CTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACA 26701 ||||| ||| || ||| || | || ||||| ||| | | || |||| || Sbjct 42544003 CTAAACAATTTCAATTTTTACTAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAAAACC 42544062 Query 26702 TGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCT 26761 ||||||||| | | ||||| |||||||| || | ||||||||||| || ||||||| Sbjct 42544063 TGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATATAATGCT 42544122 Query 26762 CATAACTTTCCACTTGACTTAGC 26784 ||||||| || || ||| |||| Sbjct 42544123 TATAACTTCCCTCTAGACCTAGC 42544145 >seq4 Length=62178258 Score = 212 bits (234), Expect = 2e-50 Identities = 237/317 (75%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 26468 TTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTA 26527 || || ||||| ||||| || |||||||| || | ||| || || || ||||| |||| Sbjct 6177722 TTCGGTCAAGAGGAAGAAACTTATAATATCGTAGTTGCTCATGGTTATTTTGGCCGATTG 6177781 Query 26528 ATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGG 26587 || || || ||||| ||||| ||||| |||||| | |||||||| | |||||||| Sbjct 6177782 ATCTTCCAATATGCTAGTTTCAATAATTCTCGTTCTTTACATTTCTTCTTAACTACTTGG 6177841 Query 26588 CCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAAT 26647 || || || || || ||| | || || | ||||| |||| ||||| || |||||||| Sbjct 6177842 CCTGTAGTAGGTATCTGGTTCACCACTTTAGGTATTAGCACTATGGCTTTCAACCTAAAC 6177901 Query 26648 GGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAAGATAATACCTACATGGGCT 26707 ||||| || |||||||| || ||||| ||| | | || |||| ||| |||||| Sbjct 6177902 GGTTTCAATTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCT 6177961 Query 26708 GATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAAC 26767 ||| | | ||||| |||||||| || | ||||||||||| || ||||||||||||||| Sbjct 6177962 GATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAAC 6178021 Query 26768 TTTCCACTTGACTTAGC 26784 || || || ||| |||| Sbjct 6178022 TTCCCTCTAGACCTAGC 6178038 >seq3 Length=45765648 Score = 156 bits (172), Expect = 1e-33 Identities = 298/435 (69%), Gaps = 8/435 (2%) Strand=Plus/Plus Query 26243 GGACAAGGGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATG 26302 || ||||| |||||| |||||| ||| |||| || || | ||||||||| ||||| || Sbjct 43949086 GGTCAAGGAAGTTTTTCTGATGGTATGGCTCTAGGAATATTTGGTACTTTCAACTTCGTG 43949145 Query 26303 TTCGTATTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCT 26362 | |||||| |||| |||| ||||| || ||||| | ||| || ||| || | | | Sbjct 43949146 ATTGTATTCTAAGCTTAACACAATATCCTTATGCATCTATTTCACATGTTAGGCATAGTT 43949205 Query 26363 GGGGTTTTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTT 26422 || || ||||| || | | ||| || || ||||| ||||| || || | | || Sbjct 43949206 GGTGTATTCGGCGGCTCCCCATTCAGTGTTACACACGGTTCCTTGGTAACCTC-TAATTT 43949264 Query 26423 -ATTGCAGAAACGACAGAG---GAAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGA 26478 || ||||| ||| | ||| | | ||| | || || | || || ||| | Sbjct 43949265 GATCAGGGAAACCACAAAAATTGAATTTGCT---AATGAAGGTTACAGATTCGGTCAACA 43949321 Query 26479 TGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTA 26538 ||||| || |||||||| || | ||| | || || ||| | ||| || ||||| || Sbjct 43949322 GGAAGAAACTTATAATATCGTAGTTGCTTATGGTTATTTTAGTCAATTGATCTTTCAATA 43949381 Query 26539 TGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGG 26598 ||| |||| || || || | | ||||||| | ||||||||||| || || || Sbjct 43949382 TGCTAGTTGCAACAATTATTATTTTGTATATTTCTTCTTAGCTACTTGGCCTGTAGTAGG 43949441 Query 26599 CATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTT 26658 || ||| | ||| || | ||||| |||| ||| | || |||||||||||||| || || Sbjct 43949442 TATCTGGTTCACAACTTTAGGTATTAGCACTATGACTTTCAACCTAAATGGTTTCAATTT 43949501 Query 26659 TAACCAGTCAGTAGT 26673 |||||| | ||||| Sbjct 43949502 TAACCAATTTGTAGT 43949516 >seq12 Length=35429946 Score = 134 bits (148), Expect = 4e-27 Identities = 308/456 (68%), Gaps = 12/456 (3%) Strand=Plus/Plus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 || ||| | ||| | || || ||||| | ||||| || | | |||||| || ||| | Sbjct 33103830 TTCTGTAATTGGATAACTAGCACTGAAACTCGTCTTTACATCGAATGGTTTGGTGTGTTG 33103889 Query 25862 ATGATACCCTGCTTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCACC 25920 ||||| || |||| | | || ||| | ||| ||||| | |||||||| || || || Sbjct 33103890 ATGATCCCTATCTTATTGACCGCAACTTC-TGTATTTATTATCGCCTTCATTGCTGCTCC 33103948 Query 25921 GCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAA 25980 || |||||||| ||||| || ||||| || ||||| || || || | ||||||||||| Sbjct 33103949 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACAA 33104008 Query 25981 TATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGAT 26040 ||| || || || || | | || | ||| || || || | || ||||||| ||| Sbjct 33104009 TATTATTTCTGGTGCCATTATTCCTACTTCT---GCTATAGGTTTGCACTTTTACCTGAT 33104065 Query 26041 CTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAA---TGGCGGACCATATCAACTCA 26096 ||||||||| | || | | || || ||| ||||||| |||| || ||| | | | Sbjct 33104066 CTGGGAAGC-GACATCTGTTGATGAATGGTTATACAATATTGGCAATCCTTATGAGTTAA 33104124 Query 26097 TTATCTTCCACTTCTTA--ATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAACTATC 26154 || | || ||||||||| || || ||||| || || | |||||||||| Sbjct 33104125 TTGTTTTACACTTCTTACTATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 33104184 Query 26155 TTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCGCAGC 26214 || | | || || || || ||||| |||| ||||| || | || | | || Sbjct 33104185 TTTCCGTCTGGGTATACTCCCTTGGATTGCTGTTACATATTCAACTCCTGTTGCAATTGC 33104244 Query 26215 TCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGG 26250 | |||| || |||||| | ||||| | || ||||| Sbjct 33104245 TATCGCTGTTTTCTTAATCTATCCAATTGGTCAAGG 33104280 Score = 127 bits (140), Expect = 6e-25 Identities = 228/324 (70%), Gaps = 7/324 (2%) Strand=Plus/Minus Query 25802 TTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTCGGGGTGCTT 25861 |||||| | ||| | || | ||||| |||||||| || | |||||||| || || | Sbjct 32314312 TTTTGTAATTGGATAACCAACACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 32314253 Query 25862 ATGATACCCTGC-TTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCATCGCAGCAC 25919 ||||| |||| | ||| | | || ||| ||| ||||| | |||||||| | || | Sbjct 32314252 ATGAT-CCCTACATTATTGACCGCAACTTT-TGTATTTATTATCGCCTTCATTACTGCTC 32314195 Query 25920 CGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACA 25979 | | |||||||| ||||| || ||||| || ||||| | || || | |||||||||| Sbjct 32314194 CTCTAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGAATCTCTACTTTACGGAAACA 32314135 Query 25980 ATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTTTTACCCGA 26039 |||| || || || || | | || | ||| || || | | || |||||||||| Sbjct 32314134 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCAGCTATTCGTTTGCACTTTTACCCGA 32314075 Query 26040 TCTGGGAAGCTGGCA-CACTGGACGAGTGGCTATACAATGGCGGACCATATCAACTCATT 26098 |||||||||| |||| | | || || | | |||||||||| || || ||| | | ||| Sbjct 32314074 TCTGGGAAGC-GGCATCTGTTGATGAATAG-TATACAATGGTGGTCCTTATGAGTTAATT 32314017 Query 26099 ATCTTCCACTTCTTAATAGGAGTA 26122 | | ||||||||| | || ||| Sbjct 32314016 GTTTAACACTTCTTACTTGGTGTA 32313993 >seq6 Length=51074515 Score = 109 bits (120), Expect = 2e-19 Identities = 187/268 (70%), Gaps = 4/268 (1%) Strand=Plus/Plus Query 26072 TACAATGGCGGACCATATCAACTCATTATCTTCCACTTCTTAATAGGAGTAGCAGCATAT 26131 ||||||||||| || ||| | | ||| | || ||||||||| | || |||| || Sbjct 39117566 TACAATGGCGGTCCTTATGAGTTAATTCTTTTACACTTCTTACTTGGTATAGCTTGTTA- 39117624 Query 26132 GCA-GGGAGAC-AGTGGGAACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTG 26189 || ||| | |||||||||| || | ||||| ||| | || ||||| |||||| Sbjct 39117625 -CATGGGTCATGAGTGGGAACTTAGTTTCCTTCTAGGTATGCGCCCTTGGATCATTGTTG 39117683 Query 26190 CATATACAGCACCACTATCCGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAG 26249 ||||| || | || | | | ||| || || || || | ||||| | || |||| Sbjct 39117684 CATATTCAACTCCTGTTGCAGTTGCTACCGTTGTTTTATTGATCTATCCAATTGGTCAAG 39117743 Query 26250 GGAGTTTTAGTGATGGAATGCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTAT 26309 | |||||| | || | ||||| || || |||||||| ||||||||||| ||| || ||| Sbjct 39117744 GAAGTTTTTCTTATTGTATGCCCCTAGGAATCTCTGGCACTTTTAACTTCATGATCTTAT 39117803 Query 26310 TCCAAGCAGAACATAATATACTCATGCA 26337 |||| | || || || || || ||||| Sbjct 39117804 TCCAGACTGAGCACAACATTCTTATGCA 39117831 >seq5 Length=64140413 Score = 98.7 bits (108), Expect = 3e-16 Identities = 120/161 (75%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 26625 GCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT-GTTAAT 26683 |||| ||||| || |||||||| | |||||| |||||| | || ||||| || ||||| Sbjct 36123717 GCACTATGGCTTTCAACCTAAACGATTTTAATTTTAACTAATCTGTAGTTAATAGTTAAA 36123658 Query 26684 GGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTT 26743 | | |||| || || || |||| | | || || |||||||| | | |||||| Sbjct 36123657 GTTGTG-TAATTAATAGATAGGTTGATATTATTAATCGTGCTAACCTTAGTATGGAAGTT 36123599 Query 26744 ATGCACGAGCGTAATGCTCATAACTTTCCACTTGACTTAGC 26784 ||||| || ||||||||||||||||| || || ||| |||| Sbjct 36123598 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCTAGC 36123558 Score = 89.7 bits (98), Expect = 2e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 26618 GGTATCTGCACAATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGAT 26677 ||||| ||| || || || || ||||| |||| || |||||||| | ||||| ||| Sbjct 8904786 GGTATTAACACTATAGCTTTCAATTTAAATAGTTTCAATTTTAACCAATTTGTAGTTGAT 8904845 Query 26678 GTTAATGGAAAGATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTT 26737 | | || | |||| || |||| |||| | | || ||||||||||| || | Sbjct 8904846 AGTCAAGGTAGTGTAATTAATATTTGGGTTGATATTATTAATCGAGCTAACCTTGGTATG 8904905 Query 26738 GAAGTTATGCACGAGCGTAATGCTCATAACTTTCCACTTGAC 26779 ||||||||||| || | ||||||||||||||| || || ||| Sbjct 8904906 GAAGTTATGCATGAACATAATGCTCATAACTTCCCTCTAGAC 8904947 >seq11 Length=62681010 Score = 80.6 bits (88), Expect = 8e-11 Identities = 209/315 (66%), Gaps = 13/315 (4%) Strand=Plus/Plus Query 26471 GGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATT 26530 || ||| | ||||| || ||||||||||| ||| | | || ||||| |||| || Sbjct 23641422 GGTCAAAAGGAAGAAACTTATAATATTGTAGCTATTTATGATTATTTTGGCCGATTGATC 23641481 Query 26531 TTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCG 26590 || | | ||| ||||| || | |||| | | |||||||| | || |||||| Sbjct 23641482 TTCGAAT-TGCTAGTTTCAACCATTTTCGTTATTTACATTTCTTCTTAACTGCTTGGCAT 23641540 Query 26591 GTTGTTGGCATATGGCTGACATCTATGGGTATCTGCACAATGGCATTTAACCTAAATGGT 26650 || || | || | | | || | | | ||| || | ||| || ||| ||||| || Sbjct 23641541 GTAGTAAGTATCTAGTTCACCGTTTTAGATATTAACATTAAGGCTTTCAACTTAAATAGT 23641600 Query 26651 TTTAACTTTAACCAGTCAGTAGTAGAT-GTTAATGGAAAG-ATAATACCTACATGGGCTG 26708 || || ||||||| | ||||| || ||||| || | ||||| ||| | | ||| Sbjct 23641601 TTCAATCTTAACCAATTCGTAGTTAATAGTTAA--GATCGTATAATTAATACCTTGACTG 23641658 Query 26709 ATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAATGCTCATAACT 26768 || | | |||||||| || | |||||| |||| || ||||||||||||||| Sbjct 23641659 ATATGT--------GCTAACCTTGGTATGGAAGTTTTGCATGACAGTAATGCTCATAACT 23641710 Query 26769 TTCCACTTGACTTAG 26783 |||| || || ||| Sbjct 23641711 TTCCTCTAAACCTAG 23641725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146724598383216