Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 1e-15 >seq2 Length=62769430 Score = 96.9 bits (106), Expect = 1e-15 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 36481 TCGTTACATGGCATTATTGGGAATTGAGGGTTTAGCGGTTGTAAGAATACTTGTCCGCTG 36540 || || ||||| || |||||| | || |||||||| |||||||| || || || ||||| Sbjct 60927520 TCATTGCATGGGATCATTGGGTACTGTGGGTTTAGTGGTTGTAAAAACACCTGACCGCTA 60927579 Query 36541 TCTTTGATGAGCTTCTTAAAAGTGAACTCATCACCACATAACCTTGCAATACAAAAATCG 36600 || |||| || ||||| || || ||||||||||| | | || || || || ||||| Sbjct 60927580 TCCCTGATCAGTTTCTTGAAGGTAAACTCATCACCCCCAAGTCTGGCTATGCAGAAATCA 60927639 Query 36601 CCTGGGTCTACAGGATNNNNNNNNNNNNNNNGAATCAGCATTCCTTCAGGAAAGCT 36656 ||||| || |||| | |||| | |||||| ||||||||||| Sbjct 60927640 CCTGGCTCAACAGCCTGCTCAGGGTCAACGAGAATTAACATTCCGTCAGGAAAGCT 60927695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157047671627224