Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20]
1,034 sequences; 761,565,430 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq2 125 5e-24
seq9 118 8e-22
seq13 105 5e-18
seq11 84.2 2e-11
seq8 82.4 6e-11
>seq2
Length=62769430
Score = 125 bits (138), Expect = 5e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634
||| || || |||||||| |||| |||| ||||| |||| ||||||||||| || |||||
Sbjct 10572309 CTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCGTCCTCCAACTGCTTCCCAGCAAA 10572250
Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694
|||| | ||| ||||||| ||||| ||||||||||| ||||||| |||||||
Sbjct 10572249 GATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTGAATCTTTGCTTTTACATT 10572190
Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754
| | | || || ||| || |||| ||||| || ||||| || | || || ||
Sbjct 10572189 GTCAATCGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTTCCTGTGAGGGTCTTCAC 10572130
Query 48755 AAAAATCTGCAT 48766
|||||| |||||
Sbjct 10572129 AAAAATTTGCAT 10572118
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||||||| || ||| || ||||| || |||||||||| ||| | ||
Sbjct 10550066 AGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGCGAGAGTGCGG 10550007
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||||||||||| |||| | |||||| || | ||||| ||||||
Sbjct 10550006 CCATCTTCAAGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATACCCTCC 10549947
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| ||| ||||||| |||
Sbjct 10549946 TTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTA 10549887
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| || | ||| || ||||| || |||||
Sbjct 10549886 ATGGTCTTTCCGGTAAGAGTCTTCACAAATATTTGCAT 10549849
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617
|||| || || ||| ||||||||| ||||||||||||| || | ||| | || ||
Sbjct 27609440 ACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCAGCTAAGGTGCGACCATCTTCA 27609381
Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGGAACGCCCTCCTTGTCGCT 48676
| |||||| || ||||| || || | ||| ||||| |||||| | || ||||||||
Sbjct 27609380 AGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATC-CCTTCCTTGTCTTG 27609322
Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736
|||||| |||||| | | | | || || || ||||||| ||||| || ||
Sbjct 27609321 GATCTTTGCCTTTACATTATCAATTGTGTCAGAGCTTTCAACCTCCAAGGTAATTGTCTT 27609262
Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
||| || | ||| || ||||| || |||||
Sbjct 27609261 TCCAGTGAGAGTCTTGACAAAGATTTGCAT 27609232
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | ||||||||| || ||| || ||||| || ||||| |||| || | ||
Sbjct 10549838 AGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGG 10549779
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || || |||||||| ||||| |||| | ||| || || | |||| ||||||
Sbjct 10549778 CCATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATACCCTCC 10549719
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | ||||| ||| ||||||| |||
Sbjct 10549718 TTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTA 10549659
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| ||||| || || ||||| || |||||
Sbjct 10549658 ATTGTCTTTCCGGTCAAGGTCTTAACAAAGATTTGCAT 10549621
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||||||||||||| || || ||| |||||||| || || || | || |||
Sbjct 10572107 AGACGCAACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGCAAGGGTTCTG 10572048
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | ||| || || ||||| || | | ||| || || | || | |||||||
Sbjct 10572047 CCATCTTCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATGCCCTCC 10571988
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || || | | | | || || ||||||||| | ||
Sbjct 10571987 TTGTCCTGAATCTTGGCCTTAACGTTATCAATTGTATCAGAACTCTCCACCTCTAAAGTG 10571928
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||||||| || | ||||||||||| ||||||||
Sbjct 10571927 ATGGTTTTTCCAGTGAGCGTTTTTACAAAGATCTGCAT 10571890
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|||||||||||||| || || || ||| ||||| |||||||| || | | | | |
Sbjct 27609905 AGCCGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCCAATGTCCTA 27609846
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||| || ||||| || || | || || || | ||| | ||||||
Sbjct 27609845 CCATCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGGATACCCTCC 27609786
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || ||| | | | || || || ||||||| ||
Sbjct 27609785 TTGTCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACCTCCAAAGTG 27609726
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| || | ||| |||||||| ||||||||
Sbjct 27609725 ATGGTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 27609688
>seq9
Length=70713020
Score = 118 bits (130), Expect = 8e-22
Identities = 149/205 (73%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||| || ||| ||| || || |||||||| || | |||| ||||| | || ||||||||
Sbjct 66881150 ATGCAGTGTGGACTCCTTCTGGATATTGTAGTCGGCTAGAGTTCGACCATCCTCCAACTG 66881209
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
||| || |||||||||| | ||| || || | |||| ||||||||||| ||||||
Sbjct 66881210 CTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGAATCTT 66881269
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
||| ||| | | | ||||| ||||||||||| || || ||||| || ||
Sbjct 66881270 CGCTTTCACATTGTCGATCGTGTCTGAGCTCTCCACCTCCAGGGTGATTGTTTTCCCGGT 66881329
Query 48743 CAAAGTTTTTACAAAAATCTGCATC 48767
||| || || || || |||||||||
Sbjct 66881330 CAAGGTCTTCACGAATATCTGCATC 66881354
Score = 116 bits (128), Expect = 3e-21
Identities = 157/219 (72%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||||||| || || ||| ||||| || || ||||| | ||| | |
Sbjct 66888202 AGTCGCAGCACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCTAGTGTCCTC 66888261
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | |||||| |||||||| ||||| | ||| ||||| | |||| ||||||
Sbjct 66888262 CCATCCTCGAGCTGCTTTCCGGCAAAAATCAGCCTCTGCTGATCTGGTGGAATACCCTCC 66888321
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| |||||| || ||| | | | | || || ||||||||||| ||
Sbjct 66888322 TTGTCCTGAATCTTGGCCTTAACATTATCAATGGTATCAGAACTCTCCACCTCCAAAGTG 66888381
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
|| |||||||| || | ||||||||||| |||||||||
Sbjct 66888382 ATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCATC 66888420
Score = 111 bits (122), Expect = 1e-19
Identities = 158/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || ||||||||||| || || || || ||||| || || || | ||| ||||
Sbjct 66881820 AGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCAAGAGTTCGG 66881879
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667
| || || | |||||| || ||||| |||| | ||| || |||| ||||| | || ||
Sbjct 66881880 CCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATC-CCTTC 66881938
Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727
||| || |||||| || ||| | | | | || || ||||||||||| |||
Sbjct 66881939 CTTATCCTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGT 66881998
Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
||| |||||||| || | |||||||||||||||||||||
Sbjct 66881999 AATAGTTTTTCCGGTGAGGGTTTTTACAAAAATCTGCATC 66882038
Score = 109 bits (120), Expect = 4e-19
Identities = 147/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622
||| || ||| ||| || || |||||||| || | || | ||||| | || ||||||||
Sbjct 66887532 ATGCAGAGTGGACTCCTTCTGGATATTGTAGTCTGCTAAAGTTCGACCATCCTCCAACTG 66887591
Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682
||| || ||||| |||| | ||| || || | |||| ||||||||||| ||||||
Sbjct 66887592 CTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTT 66887651
Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742
||| ||| | | | || || ||||||||||| || || ||||| || ||
Sbjct 66887652 AGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGATGGTTTTCCCAGT 66887711
Query 48743 CAAAGTTTTTACAAAAATCTGCATC 48767
|||||| || || || |||||||||
Sbjct 66887712 CAAAGTCTTCACGAATATCTGCATC 66887736
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| |||| ||||| || || || ||| ||||| || || ||||| | || | |
Sbjct 66887974 AGGCGCAGAACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCAAGCGTCCTC 66888033
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | ||||| || ||||| |||| | ||| || || | || | ||||||
Sbjct 66888034 CCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATACCCTCC 66888093
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || || | | | | ||||| ||||||||||| |||
Sbjct 66888094 TTGTCTTGGATCTTGGCCTTCACGTTATCAATTGTGTCTGAACTCTCCACCTCCAATGTA 66888153
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| |||||||| ||||||||||| ||||||||||||||
Sbjct 66888154 ATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCAT 66888191
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| |||||| ||||| || ||||||| || | | | | || ||||| |||
Sbjct 65274296 TGAAGGGTGGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCCTCCAATTGC 65274237
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683
|| || ||||| || || | || ||||| | ||| | || |||||||| |||||||
Sbjct 65274236 TTGCCAGCAAAGATGAGCCTTTGCTGATCTGGGGGGATACCTTCCTTGTCCTGAATCTTT 65274177
Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743
|| ||| | | | || || |||||||||| || || ||||| || |||
Sbjct 65274176 GCCTTCACATTGTCAATTGTATCCGAACTTTCCACCTCCAATGTGATTGTTTTCCCAGTC 65274117
Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||||||||||
Sbjct 65274116 AATGTCTTAACGAAAATCTGCAT 65274094
Score = 82.4 bits (90), Expect = 6e-11
Identities = 95/128 (74%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 9088 ATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAAC 9147
|| || || | ||| ||||| ||| ||||| |||| || || ||||| ||||||
Sbjct 15754502 ATCAACTGGGAAATTCTGTCACCCACTTTCACTTCAAAATCAACATCAGAATGGTTGAAC 15754561
Query 9148 AGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCACGTCGATG 9207
| | ||| |||| | ||||||||||| |||| ||||| |||||||| |||||||||
Sbjct 15754562 AAAATCACCCCCAGGGGTCCCCTGTAATCAGCATCTATCACTCCAGCACCTACGTCGATG 15754621
Query 9208 AAGTGCTT 9215
| |||||
Sbjct 15754622 GAATGCTT 15754629
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || || || ||||| |||||||| || ||| || ||||| || || || || |
Sbjct 66887737 CCTCCTCTAAGGCGCAAAACCAAATGCAGAGTGGATTCCTTTTGGATGTTATAGTCCGCA 66887796
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | | | || || | |||||| |||||||| |||| | ||| || || | |||
Sbjct 66887797 AGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 66887856
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||||||||||| ||| || ||| ||| | | | || || ||| |||
Sbjct 66887857 ATCCCCTCCTTGTCCTGAATTTTCGCTTTAACATTGTCAATGGTGTCCGAGCTCTCGACC 66887916
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
|||| || || ||||| || ||||| || || || || |||||||||
Sbjct 66887917 TCCAGTGTTATGGTTTTACCAGTCAAGGTCTTAACGAATATCTGCATC 66887964
>seq13
Length=58321163
Score = 105 bits (116), Expect = 5e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || || ||| ||| || || ||||| || |||| || | ||
Sbjct 44437187 AGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCCAGGGTACGG 44437246
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || |||| |||||||| ||||| ||||| | |||||| || | ||| | ||||||
Sbjct 44437247 CCATCCTCCAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGGTCTGGGGGGATTCCCTCC 44437306
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||| ||| || ||| | | | ||||| ||| ||||||| |||
Sbjct 44437307 TTGTCCTGAATTTTTGCCTTAACATTGTCAATGGTATCTGAACTCTCTACCTCCAATGTA 44437366
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||||||| || |||||||| |||||
Sbjct 44437367 ATGGTCTTCCCAGTCAAAGTCTTAACAAAAATTTGCAT 44437404
>seq11
Length=62681010
Score = 84.2 bits (92), Expect = 2e-11
Identities = 141/204 (69%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623
|| || ||| ||| ||||||||||||||||||| | | | | | || |||| |||
Sbjct 1163249 TGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAGCTGT 1163308
Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683
|| || ||||| |||| | || ||||| | |||| || || ||||| ||||||
Sbjct 1163309 TTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTC 1163368
Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743
||| || | | | | || || |||||| || | |||||||| || || |||
Sbjct 1163369 GCTTTCACGTTATCAATCGTATCCGAGCTCTCCACTTCTAAAGTAATCGTCTTACCGGTC 1163428
Query 48744 AAAGTTTTTACAAAAATCTGCATC 48767
||||| || || || |||||||||
Sbjct 1163429 AAAGTCTTGACGAAGATCTGCATC 1163452
>seq8
Length=57128820
Score = 82.4 bits (90), Expect = 6e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| ||||| || || | ||| | ||| || ||| || || || || ||||| || | |
Sbjct 38526372 CCTCCCCTAAGACGGAGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCT 38526313
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
| | || |||| || | |||||| |||||||| || || |||||||| || | ||
Sbjct 38526312 AAGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGG 38526253
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| |||||||||||| ||||| ||| ||| | | | || || | ||| |||
Sbjct 38526252 ATGCCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACC 38526193
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767
|| | || || || || ||||| | ||||| || || || ||||||
Sbjct 38526192 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATC 38526145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380932799471982
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