Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq2 125 5e-24 seq9 118 8e-22 seq13 105 5e-18 seq11 84.2 2e-11 seq8 82.4 6e-11 >seq2 Length=62769430 Score = 125 bits (138), Expect = 5e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || |||||||| |||| |||| ||||| |||| ||||||||||| || ||||| Sbjct 10572309 CTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCGTCCTCCAACTGCTTCCCAGCAAA 10572250 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 |||| | ||| ||||||| ||||| ||||||||||| ||||||| ||||||| Sbjct 10572249 GATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTGTCCTGAATCTTTGCTTTTACATT 10572190 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | | || || ||| || |||| ||||| || ||||| || | || || || Sbjct 10572189 GTCAATCGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTTCCTGTGAGGGTCTTCAC 10572130 Query 48755 AAAAATCTGCAT 48766 |||||| ||||| Sbjct 10572129 AAAAATTTGCAT 10572118 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| || ||| || ||||| || |||||||||| ||| | || Sbjct 10550066 AGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGCGAGAGTGCGG 10550007 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||||||||||| |||| | |||||| || | ||||| |||||| Sbjct 10550006 CCATCTTCAAGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATACCCTCC 10549947 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| ||| ||||||| ||| Sbjct 10549946 TTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTA 10549887 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | ||| || ||||| || ||||| Sbjct 10549886 ATGGTCTTTCCGGTAAGAGTCTTCACAAATATTTGCAT 10549849 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||| || || ||| ||||||||| ||||||||||||| || | ||| | || || Sbjct 27609440 ACCAGGTGGAGGGTGGACTCTTTTTGGATATTGTAATCAGCTAAGGTGCGACCATCTTCA 27609381 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATC-CGTGGGAACGCCCTCCTTGTCGCT 48676 | |||||| || ||||| || || | ||| ||||| |||||| | || |||||||| Sbjct 27609380 AGCTGCTTTCCAGCAAAGATAAGCCTCTGCTGATCTGGTGGGATC-CCTTCCTTGTCTTG 27609322 Query 48677 AATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||| |||||| | | | | || || || ||||||| ||||| || || Sbjct 27609321 GATCTTTGCCTTTACATTATCAATTGTGTCAGAGCTTTCAACCTCCAAGGTAATTGTCTT 27609262 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| || | ||| || ||||| || ||||| Sbjct 27609261 TCCAGTGAGAGTCTTGACAAAGATTTGCAT 27609232 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||||||||| || ||| || ||||| || ||||| |||| || | || Sbjct 10549838 AGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGG 10549779 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || || |||||||| ||||| |||| | ||| || || | |||| |||||| Sbjct 10549778 CCATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATACCCTCC 10549719 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | ||||| ||| ||||||| ||| Sbjct 10549718 TTGTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTA 10549659 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| ||||| || || ||||| || ||||| Sbjct 10549658 ATTGTCTTTCCGGTCAAGGTCTTAACAAAGATTTGCAT 10549621 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||||||||||||| || || ||| |||||||| || || || | || ||| Sbjct 10572107 AGACGCAACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGCAAGGGTTCTG 10572048 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || || ||||| || | | ||| || || | || | ||||||| Sbjct 10572047 CCATCTTCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATGCCCTCC 10571988 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || || | | | | || || ||||||||| | || Sbjct 10571987 TTGTCCTGAATCTTGGCCTTAACGTTATCAATTGTATCAGAACTCTCCACCTCTAAAGTG 10571928 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| || | ||||||||||| |||||||| Sbjct 10571927 ATGGTTTTTCCAGTGAGCGTTTTTACAAAGATCTGCAT 10571890 Score = 82.4 bits (90), Expect = 6e-11 Identities = 149/218 (68%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 |||||||||||||| || || || ||| ||||| |||||||| || | | | | | Sbjct 27609905 AGCCGCAACACCAAGTGAAGGGTAGACTCCTTTTGGATATTGTAGTCGGCCAATGTCCTA 27609846 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| || ||||| || || | || || || | ||| | |||||| Sbjct 27609845 CCATCTTCGAGCTGCTTGCCAGCAAAGATGAGCCTTTGCTGGTCTGGGGGGATACCCTCC 27609786 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | | || || || ||||||| || Sbjct 27609785 TTGTCTTGGATCTTTGCCTTCACATTGTCAATGGTATCGGAACTTTCAACCTCCAAAGTG 27609726 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | ||| |||||||| |||||||| Sbjct 27609725 ATGGTCTTTCCGGTAAGAGTCTTTACAAAGATCTGCAT 27609688 >seq9 Length=70713020 Score = 118 bits (130), Expect = 8e-22 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| || || |||||||| || | |||| ||||| | || |||||||| Sbjct 66881150 ATGCAGTGTGGACTCCTTCTGGATATTGTAGTCGGCTAGAGTTCGACCATCCTCCAACTG 66881209 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || |||||||||| | ||| || || | |||| ||||||||||| |||||| Sbjct 66881210 CTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGAATCTT 66881269 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| ||| | | | ||||| ||||||||||| || || ||||| || || Sbjct 66881270 CGCTTTCACATTGTCGATCGTGTCTGAGCTCTCCACCTCCAGGGTGATTGTTTTCCCGGT 66881329 Query 48743 CAAAGTTTTTACAAAAATCTGCATC 48767 ||| || || || || ||||||||| Sbjct 66881330 CAAGGTCTTCACGAATATCTGCATC 66881354 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||||||| || || ||| ||||| || || ||||| | ||| | | Sbjct 66888202 AGTCGCAGCACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCTAGTGTCCTC 66888261 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | |||||| |||||||| ||||| | ||| ||||| | |||| |||||| Sbjct 66888262 CCATCCTCGAGCTGCTTTCCGGCAAAAATCAGCCTCTGCTGATCTGGTGGAATACCCTCC 66888321 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| |||||| || ||| | | | | || || ||||||||||| || Sbjct 66888322 TTGTCCTGAATCTTGGCCTTAACATTATCAATGGTATCAGAACTCTCCACCTCCAAAGTG 66888381 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || |||||||| || | ||||||||||| ||||||||| Sbjct 66888382 ATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCATC 66888420 Score = 111 bits (122), Expect = 1e-19 Identities = 158/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || ||||||||||| || || || || ||||| || || || | ||| |||| Sbjct 66881820 AGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCAAGAGTTCGG 66881879 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCG-TGGGAACGCCCTC 48667 | || || | |||||| || ||||| |||| | ||| || |||| ||||| | || || Sbjct 66881880 CCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATC-CCTTC 66881938 Query 48668 CTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGT 48727 ||| || |||||| || ||| | | | | || || ||||||||||| ||| Sbjct 66881939 CTTATCCTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGT 66881998 Query 48728 AATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 ||| |||||||| || | ||||||||||||||||||||| Sbjct 66881999 AATAGTTTTTCCGGTGAGGGTTTTTACAAAAATCTGCATC 66882038 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 48563 ATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTG 48622 ||| || ||| ||| || || |||||||| || | || | ||||| | || |||||||| Sbjct 66887532 ATGCAGAGTGGACTCCTTCTGGATATTGTAGTCTGCTAAAGTTCGACCATCCTCCAACTG 66887591 Query 48623 CTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTT 48682 ||| || ||||| |||| | ||| || || | |||| ||||||||||| |||||| Sbjct 66887592 CTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTT 66887651 Query 48683 TTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGT 48742 ||| ||| | | | || || ||||||||||| || || ||||| || || Sbjct 66887652 AGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGATGGTTTTCCCAGT 66887711 Query 48743 CAAAGTTTTTACAAAAATCTGCATC 48767 |||||| || || || ||||||||| Sbjct 66887712 CAAAGTCTTCACGAATATCTGCATC 66887736 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || |||| ||||| || || || ||| ||||| || || ||||| | || | | Sbjct 66887974 AGGCGCAGAACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCAAGCGTCCTC 66888033 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| || ||||| |||| | ||| || || | || | |||||| Sbjct 66888034 CCATCCTCGAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATACCCTCC 66888093 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || || | | | | ||||| ||||||||||| ||| Sbjct 66888094 TTGTCTTGGATCTTGGCCTTCACGTTATCAATTGTGTCTGAACTCTCCACCTCCAATGTA 66888153 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || |||||||| ||||||||||| |||||||||||||| Sbjct 66888154 ATAGTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCAT 66888191 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| |||||| ||||| || ||||||| || | | | | || ||||| ||| Sbjct 65274296 TGAAGGGTGGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCCTCCAATTGC 65274237 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| || || | || ||||| | ||| | || |||||||| ||||||| Sbjct 65274236 TTGCCAGCAAAGATGAGCCTTTGCTGATCTGGGGGGATACCTTCCTTGTCCTGAATCTTT 65274177 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || || |||||||||| || || ||||| || ||| Sbjct 65274176 GCCTTCACATTGTCAATTGTATCCGAACTTTCCACCTCCAATGTGATTGTTTTCCCAGTC 65274117 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || || || || ||||||||||| Sbjct 65274116 AATGTCTTAACGAAAATCTGCAT 65274094 Score = 82.4 bits (90), Expect = 6e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 9088 ATTAATTGAGCAATCCTGTCCCCCTTATTCACGACAAAGTCTGTGTCGGAATGATTGAAC 9147 || || || | ||| ||||| ||| ||||| |||| || || ||||| |||||| Sbjct 15754502 ATCAACTGGGAAATTCTGTCACCCACTTTCACTTCAAAATCAACATCAGAATGGTTGAAC 15754561 Query 9148 AGCACCACTCCCACGTTACCCCTGTAATCCTCATCGATCACACCAGCACCCACGTCGATG 9207 | | ||| |||| | ||||||||||| |||| ||||| |||||||| ||||||||| Sbjct 15754562 AAAATCACCCCCAGGGGTCCCCTGTAATCAGCATCTATCACTCCAGCACCTACGTCGATG 15754621 Query 9208 AAGTGCTT 9215 | ||||| Sbjct 15754622 GAATGCTT 15754629 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || || || ||||| |||||||| || ||| || ||||| || || || || | Sbjct 66887737 CCTCCTCTAAGGCGCAAAACCAAATGCAGAGTGGATTCCTTTTGGATGTTATAGTCCGCA 66887796 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | | | || || | |||||| |||||||| |||| | ||| || || | ||| Sbjct 66887797 AGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 66887856 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||||||||||| ||| || ||| ||| | | | || || ||| ||| Sbjct 66887857 ATCCCCTCCTTGTCCTGAATTTTCGCTTTAACATTGTCAATGGTGTCCGAGCTCTCGACC 66887916 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 |||| || || ||||| || ||||| || || || || ||||||||| Sbjct 66887917 TCCAGTGTTATGGTTTTACCAGTCAAGGTCTTAACGAATATCTGCATC 66887964 >seq13 Length=58321163 Score = 105 bits (116), Expect = 5e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || ||| ||| || || ||||| || |||| || | || Sbjct 44437187 AGACGAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATATTATAGTCAGCCAGGGTACGG 44437246 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || |||| |||||||| ||||| ||||| | |||||| || | ||| | |||||| Sbjct 44437247 CCATCCTCCAGTTGCTTACCAGCAAAAATCAGCCTCTGTTGGTCTGGGGGGATTCCCTCC 44437306 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| ||| || ||| | | | ||||| ||| ||||||| ||| Sbjct 44437307 TTGTCCTGAATTTTTGCCTTAACATTGTCAATGGTATCTGAACTCTCTACCTCCAATGTA 44437366 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||||||| || |||||||| ||||| Sbjct 44437367 ATGGTCTTCCCAGTCAAAGTCTTAACAAAAATTTGCAT 44437404 >seq11 Length=62681010 Score = 84.2 bits (92), Expect = 2e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| ||||||||||||||||||| | | | | | || |||| ||| Sbjct 1163249 TGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAGCTGT 1163308 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || ||||| |||| | || ||||| | |||| || || ||||| |||||| Sbjct 1163309 TTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTC 1163368 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 ||| || | | | | || || |||||| || | |||||||| || || ||| Sbjct 1163369 GCTTTCACGTTATCAATCGTATCCGAGCTCTCCACTTCTAAAGTAATCGTCTTACCGGTC 1163428 Query 48744 AAAGTTTTTACAAAAATCTGCATC 48767 ||||| || || || ||||||||| Sbjct 1163429 AAAGTCTTGACGAAGATCTGCATC 1163452 >seq8 Length=57128820 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || ||||| || || | ||| | ||| || ||| || || || || ||||| || | | Sbjct 38526372 CCTCCCCTAAGACGGAGCACGAGATGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGCT 38526313 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 | | || |||| || | |||||| |||||||| || || |||||||| || | || Sbjct 38526312 AAGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGGTCGGGTGGG 38526253 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | |||||||||||| ||||| ||| ||| | | | || || | ||| ||| Sbjct 38526252 ATGCCCTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACC 38526193 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCATC 48767 || | || || || || ||||| | ||||| || || || |||||| Sbjct 38526192 TCTAGGGTTATGGTCTTCCCCGTTAGGGTTTTGACGAAGATTTGCATC 38526145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380932799471982