Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20]
1,034 sequences; 761,565,430 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq9 147 2e-30
seq2 140 2e-28
seq13 131 1e-25
seq10 125 6e-24
seq6 120 2e-22
seq4 118 8e-22
seq3 111 1e-19
seq11 105 5e-18
seq12 96.9 3e-15
seq511 93.3 3e-14
>seq9
Length=70713020
Score = 147 bits (162), Expect = 2e-30
Identities = 171/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| || | |||| |||||||| || |||||||| ||||| |||||||| ||||||
Sbjct 66887737 CCTCCTCTAAGGCGCAAAACCAAATGCAGAGTGGATTCCTTTTGGATGTTATAGTCCGCA 66887796
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | ||| || || || || || ||| | ||||| || ||||| || || |||
Sbjct 66887797 AGCGTCCTCCCATCCTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGA 66887856
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| ||||| ||||| || |||||| | ||| ||| | || | ||||| || || ||
Sbjct 66887857 ATCCCCTCCTTGTCCTG-AATTTTCGCTTTAACATTGTCAATGGTGTCCGAGCTCTCGAC 66887915
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| ||||| ||||| ||||| ||||| |||||||||||
Sbjct 66887916 CTCCAGTGTTATGGTTTTACCAGTCAAGGTCTTAACGAATATCTGCAT 66887963
Score = 143 bits (158), Expect = 2e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || || | ||| || ||||| || ||||| || || || || |||
Sbjct 66882495 CCACCCCTTAGACGAAGGACTAGATGGAGGGTGGACTCCTTTTGGATATTGTAGTCGGCA 66882554
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| ||||||||||| || ||| | || | |||||||| || || ||
Sbjct 66882555 AGAGTTCGGCCATCCTCGAGTTGTTTTCCGGCAAAGATAAGCCTTTGCTGGTCAGGAGGG 66882614
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| |||||| | || | ||| |||||| ||||||
Sbjct 66882615 ATCCCTTCTTTGTCTTGGATTTTAGCCTTGACATTATCGATAGTATCAGAACTTTCTACC 66882674
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || ||||| | |||||| ||||| ||||||||
Sbjct 66882675 TCAAGGGTGATGGTCTTACCAGTAAGGGTTTTCACAAAGATCTGCAT 66882721
Score = 140 bits (154), Expect = 2e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||| || | || |||||||||||||| || || || || ||||| ||||||||||||||
Sbjct 66888192 TCCACCACGCAGTCGCAGCACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAATCCGC 66888251
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| || | ||| ||||| || || || ||| | |||| || |||||||| || ||
Sbjct 66888252 TAGTGTCCTCCCATCCTCGAGCTGCTTTCCGGCAAAAATCAGCCTCTGCTGATCTGGTGG 66888311
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737
||||||||| ||||| || ||| || | || ||| | || | || |||||| || |
Sbjct 66888312 AATACCCTCCTTGTCCTG-AATCTTGGCCTTAACATTATCAATGGTATCAGAACTCTCCA 66888370
Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || | ||| || ||||| || || | |||||| ||||||||||||||
Sbjct 66888371 CCTCCAAAGTGATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 66888419
Score = 138 bits (152), Expect = 9e-28
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
||||| ||||| || || || || || ||||| |||||||||||||||| || | |
Sbjct 66887977 CGCAGAACCAAGTGCAGGGTTGACTCCTTTTGGATGTTATAATCCGCAAGCGTCCTCCCA 66888036
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| |||||||| || |||||| | ||||| || ||||| || || || |||||||| |||
Sbjct 66888037 TCCTCGAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATACCCTCCTTG 66888096
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
||||| | || || || | || | ||||| ||| || || || | || |||
Sbjct 66888097 TCTTGGATCTTGGCCTTCACGTTATCAATTGTGTCTGAACTCTCCACCTCCAATGTAATA 66888156
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
||||| ||||| || ||||| ||||| |||||||||
Sbjct 66888157 GTTTTTCCAGTCAAAGTTTTCACAAAAATCTGCATT 66888192
Score = 131 bits (144), Expect = 1e-25
Identities = 158/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| |||||||| || || || || ||||| || || |||||||| |||| || | | |
Sbjct 66881595 CGGAGCACCAAGTGGAGGGTAGACTCTTTCTGGATATTATAATCTGCAAGTGTCCTACCA 66881654
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| ||||| |||||||||||| | ||||| || |||||||| || ||||| || || |||
Sbjct 66881655 TCTTCGAGCTGTTTGCCAGCAAAAATCAACCTCTGCTGATCTGGTGGAATCCCTTCCTTG 66881714
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
|| || | || ||| ||| | || | ||||||||| || ||||| | ||| |||
Sbjct 66881715 TCCTGGATCTTAGCTTTTACATTGTCAATGGTGTCAGAACTCTCAACTTCCAAAGTAATA 66881774
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || | || || ||||| || |||||
Sbjct 66881775 GTCTTTCCGGTGAGAGTCTTCACAAAAATTTGCAT 66881809
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || || | || || || || ||||| || ||||| ||||| |||
Sbjct 66882039 CCACCCCTAAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAATCTGCA 66882098
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || | | ||| ||||||||||| || ||| | ||||| || |||||||| || |||
Sbjct 66882099 AGTGTCCTACCATCTTCGAGTTGTTTTCCGGCAAAAATCAACCTCTGCTGATCTGGTGGA 66882158
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||| | || |||||| | || | ||| || || || ||
Sbjct 66882159 ATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCGATAGTATCGGAGCTCTCCACC 66882218
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || ||||| | |||||| ||||| ||||||||
Sbjct 66882219 TCAAGGGTGATGGTCTTACCAGTAAGGGTTTTTACAAAGATCTGCAT 66882265
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || || | || || ||||| || ||||| ||||| || || |||
Sbjct 66888649 CCACCCCTTAGACGAAGGACTAGGTGGAGGGTGGACTCCTTTTGGATGTTGTAGTCGGCA 66888708
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| || |||||||| || ||| | || | ||||| || || || |||
Sbjct 66888709 AGAGTTCGGCCATCCTCAAGTTGTTTTCCGGCAAAGATAAGCCTTTGTTGGTCTGGAGGA 66888768
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | ||| |||||| | || | ||| || || ||||||
Sbjct 66888769 ATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTATCGATAGTATCGGAGCTTTCTACC 66888828
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || ||||| | |||||| ||||| || |||||
Sbjct 66888829 TCAAGGGTGATGGTCTTACCAGTAAGGGTTTTCACAAAGATTTGCAT 66888875
Score = 123 bits (136), Expect = 2e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
|||||||| || || ||||| ||||| |||||||| || |||| || | ||| ||
Sbjct 66881373 ACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCCTCA 66881432
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
|| || || || ||| | ||||| || ||||| || || ||||| ||||| ||||| ||
Sbjct 66881433 AGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTG- 66881491
Query 29698 AATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756
|||||| | ||||||| | || | ||||| || || || || || || || |||||
Sbjct 66881492 AATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTCTCGACCTCCAGGGTGATGGTTTT 66881551
Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| || || |||||||||||
Sbjct 66881552 ACCGGTCAAGGTCTTCACGAATATCTGCAT 66881581
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| | ||||||||| || || ||||| || ||||||||||| ||||||| || ||
Sbjct 66881822 ACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCAAGAGTTCGGCC 66881881
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || |||||| | ||||| || ||||| ||||| || || || || ||
Sbjct 66881882 ATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGGATCCCTTCCTT 66881941
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| || | || ||| | || | || |||||| || || || | || |
Sbjct 66881942 ATCCTG-AATCTTGGCCTTAACATTATCAATCGTATCAGAACTCTCCACCTCCAACGTAA 66882000
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||||| || || | |||||| ||||| ||||||||
Sbjct 66882001 TAGTTTTTCCGGTGAGGGTTTTTACAAAAATCTGCAT 66882037
Score = 122 bits (134), Expect = 7e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || || | || ||||| || ||||| || ||||| ||||| ||
Sbjct 66888421 CCACCCCTAAGACGAAGGACAAGGTGGAGCGTAGACTCTTTCTGGATGTTGTAATCAGCG 66888480
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || |||||||| || ||| | || | || || || || || ||
Sbjct 66888481 AGGGTCCGGCCATCTTCAAGTTGTTTACCTGCAAAGATAAGCCTCTGTTGGTCTGGAGGG 66888540
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||| | || |||||| | || | || |||||| ||| ||
Sbjct 66888541 ATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATCGTATCAGAACTTTCCACC 66888600
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || || |||||||| | |||||| ||||||||||||||
Sbjct 66888601 TCGAGGGTGATGGTCTTGCCAGTAAGGGTTTTCACAAATATCTGCAT 66888647
Score = 118 bits (130), Expect = 8e-22
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| ||||| ||||| |||||||||||||| || | || |
Sbjct 65274309 ACGAAGAACAAGGTGAAGGGTGGACTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCC 65274250
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | ||| ||||||||| | || | ||||||||||| || || ||||| || ||
Sbjct 65274249 ATCCTCCAATTGCTTGCCAGCAAAGATGAGCCTTTGCTGATCTGGGGGGATACCTTCCTT 65274190
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| |||| || ||| | || | || || ||| ||| || || | || |
Sbjct 65274189 GTCCTG-AATCTTTGCCTTCACATTGTCAATTGTATCCGAACTTTCCACCTCCAATGTGA 65274131
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| ||||| || || ||||| || ||||||||
Sbjct 65274130 TTGTTTTCCCAGTCAATGTCTTAACGAAAATCTGCAT 65274094
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || |||||||| || || || |||||||| || | ||| ||
Sbjct 65273853 ACGGAGGACGAGGTGGAGGGTGGATTCCTTCTGGATATTATAATCGGCCAGGGTACGGCC 65273794
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| |||||||| || | || | | ||||| || || || || || || ||
Sbjct 65273793 ATCTTCGAGCTGTTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTT 65273734
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|||||| | ||| |||||| | || | ||||| || || ||||| || || ||
Sbjct 65273733 GTCTTGGATTTTAGACTTGACATTGTCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGAT 65273674
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| ||||||||||| || || ||||||||
Sbjct 65273673 GGTCTTGCCGGTTAAGGTTTTGACGAAGATCTGCAT 65273638
Score = 107 bits (118), Expect = 1e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || || | || || || || ||||| || ||||| |||||||||
Sbjct 66882267 CCACCCCTAAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAATCCGCA 66882326
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || || ||| || || ||||| || ||| | || | || || || || || ||
Sbjct 66882327 AGAGTTCGGCCATCTTCAAGCTGTTTACCGGCAAAGATAAGCCTCTGTTGGTCTGGTGGG 66882386
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || |||||||| | || |||||| | || | || || ||| ||| ||
Sbjct 66882387 ATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTATCGGAACTTTCCACC 66882446
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || ||||| |||||||| | ||||| || |||||||||||
Sbjct 66882447 TCGAGGGTGATAGTCTTGCCAGTAAGAGTTTTCACGAATATCTGCAT 66882493
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || || | ||| || ||||| || || || || || || || || | || ||| |
Sbjct 66881139 CGAAGGACAAGATGCAGTGTGGACTCCTTCTGGATATTGTAGTCGGCTAGAGTTCGACCA 66881198
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || | || || |||||| ||||||| || ||||| || || ||||| ||||| |||
Sbjct 66881199 TCCTCCAACTGCTTCCCAGCAAATATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTG 66881258
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| || | ||| ||| | || | ||||| || || || || || || ||
Sbjct 66881259 TCCTG-AATCTTCGCTTTCACATTGTCGATCGTGTCTGAGCTCTCCACCTCCAGGGTGAT 66881317
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || ||||| || || |||||||||||
Sbjct 66881318 TGTTTTCCCGGTCAAGGTCTTCACGAATATCTGCAT 66881353
Score = 100 bits (110), Expect = 2e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || |||||||| || || ||||| ||||| || | ||| || || ||||| |||
Sbjct 65273384 TGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGT 65273325
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || || | || | | ||||| || || || || || || |||||||| ||||||
Sbjct 65273324 TTTCCGGCGAAGATAAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTG-AATTTT 65273266
Query 29704 TGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| || ||| | || | ||||| || || ||||| || || || || ||||| ||
Sbjct 65273265 AGACTTCACATTATCGATGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGT 65273206
Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786
||||||||| || || ||||||||
Sbjct 65273205 TAAGGTTTTGACGAAGATCTGCAT 65273182
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || || | ||| || ||||| || || || || || || || || | || ||| |
Sbjct 66887521 CGAAGGACAAGATGCAGAGTGGACTCCTTCTGGATATTGTAGTCTGCTAAAGTTCGACCA 66887580
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || | || || |||||| | ||||| || ||||| || || ||||| ||||| |||
Sbjct 66887581 TCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTG 66887640
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| || | ||| ||| | || | ||||| || || || || || || ||
Sbjct 66887641 TCCTG-AATCTTAGCTTTCACATTGTCAATCGTGTCCGAGCTCTCCACCTCCAGGGTGAT 66887699
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| ||||| || || || || |||||||||||
Sbjct 66887700 GGTTTTCCCAGTCAAAGTCTTCACGAATATCTGCAT 66887735
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/205 (71%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
||||| || ||||| || || ||||||||||| || | ||| | ||| || || ||
Sbjct 65274068 TGAAGGGTCGATTCCTTCTGGATGTTATAATCAGCCAAGGTCCTCCCATCCTCAAGCTGC 65274009
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|| || ||| | ||||| | ||| || || ||||| || || || ||||| || ||| ||
Sbjct 65274008 TTCCCTGCAAAGATCAAACGTTGTTGGTCTGGCGGGATCCCTTCCTTGTCCTG-AATCTT 65273950
Query 29704 TG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| || ||| | || | ||||| ||| || || || | || || || ||||| ||
Sbjct 65273949 CGCCTTTACATTGTCGATGGTGTCCGAACTCTCCACCTCCAAGGTGATGGTCTTGCCGGT 65273890
Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787
|||||||| || || |||||||||
Sbjct 65273889 CAAGGTTTTCACGAAGATCTGCATT 65273865
>seq2
Length=62769430
Score = 140 bits (154), Expect = 2e-28
Identities = 161/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || |||||||| ||||| ||||| || || || | ||||||
Sbjct 10549836 ACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAGTCAGCCAGGGTGCGGCC 10549777
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | ||| || |||||| | ||||| || ||||| || |||||||||||||| ||
Sbjct 10549776 ATCTTCTAATTGCTTACCAGCAAAGATCAACCTCTGCTGGTCTGGCGGAATACCCTCCTT 10549717
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || |||||| | || | || || ||| || || || | ||| ||
Sbjct 10549716 GTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAAT 10549657
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| || || || ||||| |||||||| || ||||||
Sbjct 10549656 TGTCTTTCCGGTCAAGGTCTTAACAAAGATTTGCATT 10549620
Score = 140 bits (154), Expect = 2e-28
Identities = 160/215 (74%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || ||||| ||||| ||||||||||| |||||||| || || || | ||||| |
Sbjct 27609218 CGAAGAACCAAGTGAAGGGTGGATTCTTTCTGAATGTTGTAGTCGGCTAGCGTGCGGCCA 27609159
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || ||||||||||||||| |||| | || ||||||||||| || || || || ||
Sbjct 27609158 TCCTCAAGTTGTTTGCCAGCAAATATAAGCCTCTGCTGATCCGGTGGGATCCCTTCCTTA 27609099
Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751
||||| | || || ||| | || | ||||| ||| || || || || || ||
Sbjct 27609098 TCTTGGATCTTAGCCTTCACATTATCAATGGTGTCTGAACTCTCCACCTCGAGGGTGATG 27609039
Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| |||||||| | |||||||||||| || |||||
Sbjct 27609038 GTCTTGCCAGTGAGGGTTTTAACAAAGATTTGCAT 27609004
Score = 134 bits (148), Expect = 1e-26
Identities = 166/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || || | || || || || ||||| || ||||| || || |||
Sbjct 10571888 CCACCCCTAAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCAGCA 10571829
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| ||| || |||||||| |||||| | || | || || || || || ||
Sbjct 10571828 AGGGTGCGGCCATCCTCCAGTTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCAGGAGGG 10571769
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| ||||||||||| | || |||||| | || | ||||| || ||| |||
Sbjct 10571768 ATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTGTCGGAGCTTTCCACT 10571709
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || |||||||| | |||||| |||||||| |||||
Sbjct 10571708 TCAAGGGTGATTGTCTTGCCAGTAAGGGTTTTGACAAATATTTGCAT 10571662
Score = 127 bits (140), Expect = 2e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
|||||| | | || ||||||||||| || ||||| || ||||| ||||| ||||| ||
Sbjct 10549620 TCCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAGC 10549561
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| ||| || ||| || ||||| || || ||| | || | ||| ||||| || || ||
Sbjct 10549560 CAGGGTACGGCCATCTTCTAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAGG 10549501
Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738
|| || ||||||||||| | || |||||| | || | ||||| || ||| ||
Sbjct 10549500 GATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCCGAGCTTTCCAC 10549441
Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || ||||| ||||| || | ||| |||||||| || |||||
Sbjct 10549440 CTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 10549393
Score = 125 bits (138), Expect = 6e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| ||||| | || || || || |||||||||||||| || || |||
Sbjct 10571660 CCACCCCTGAGACGAAGCACAAGGTGGAGGGTAGACTCTTTTTGAATGTTGTAGTCAGCA 10571601
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||||| ||| || ||||| || || ||| | || | || || || || || ||
Sbjct 10571600 AGGGTGCGACCATCTTCAAGTTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCAGGGGGG 10571541
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||| || || | || |||||| | || | |||||||| ||| ||
Sbjct 10571540 ATCCCTTCTTTATCCTGGATCTTAGCCTTGACATTATCAATTGTGTCAGAGCTTTCAACC 10571481
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || |||||||| | |||||| || || ||||||||
Sbjct 10571480 TCAAGGGTGATTGTCTTGCCAGTAAGGGTTTTTACGAAGATCTGCAT 10571434
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||||| ||||||||| || || || || |||||||||||||| || |||| ||| |
Sbjct 10572105 ACGCAACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGCAAGGGTTCTGCC 10572046
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||| |||||| | || || || ||||| || || || || ||||| ||
Sbjct 10572045 ATCTTCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGGATGCCCTCCTT 10571986
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | || || | || | || |||||| || || || | ||| |
Sbjct 10571985 GTCCTG-AATCTTGGCCTTAACGTTATCAATTGTATCAGAACTCTCCACCTCTAAAGTGA 10571927
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 10571926 TGGTTTTTCCAGTGAGCGTTTTTACAAAGATCTGCAT 10571890
Score = 120 bits (132), Expect = 2e-22
Identities = 156/216 (72%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| ||||||||||| || |||||||| ||||| ||||| ||||| || | |||||
Sbjct 10550064 ACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGCGAGAGTGCGGCC 10550005
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || ||||| || || ||| | ||||| || || || || || ||||||||||| ||
Sbjct 10550004 ATCTTCAAGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGGGGAATACCCTCCTT 10549945
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || |||||| | || | || || ||| || || || | ||| ||
Sbjct 10549944 GTCCTGGATCTTAGCCTTGACATTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAAT 10549885
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || || || | || || |||||||| |||||
Sbjct 10549884 GGTCTTTCCGGTAAGAGTCTTCACAAATATTTGCAT 10549849
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||||||||| || ||||| || || ||||| || || |||||||| || || |||
Sbjct 10549391 CCACCCCTCAAACGAAGGACCAAGTGGAGGGTGGACTCCTTCTGAATGTTGTAGTCAGCA 10549332
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| || ||| ||| || || || || |||||| | || | || || ||||| || ||
Sbjct 10549331 AGTGTACGACCATCCTCTAGCTGCTTACCAGCAAAGATAAGCCTCTGTTGATCTGGTGGG 10549272
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||| ||||| | || |||||| | || | ||||| || ||| ||
Sbjct 10549271 ATTCCTTCTTTATCTTGGATCTTGGCCTTGACATTATCGATGGTGTCGGAGCTTTCCACC 10549212
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || ||||| || | ||| || || || || |||||
Sbjct 10549211 TCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATTTGCAT 10549165
Score = 107 bits (118), Expect = 1e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || |||||||| || || || || || || || |||||||| |||| || | |
Sbjct 27609674 CGGAGAACCAAATGGAGAGTAGACTCCTTCTGGATATTATAATCGGCAAGAGTTCTTCCA 27609615
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || |||||||| |||||| | ||||||||||| || || || || || || ||||||
Sbjct 27609614 TCTTCAAGTTGTTTTCCAGCAAAAATCAATCTTTGTTGGTCTGGTGGGATTCCTTCTTTG 27609555
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| || | ||| ||| | || | || || ||| || || || | || ||
Sbjct 27609554 TCCTG-AATCTTGGCTTTCACATTATCAATGGTATCCGAACTCTCGACCTCCAAGGTGAT 27609496
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| | ||||| ||||| || |||||
Sbjct 27609495 TGTCTTTCCAGTGAGAGTTTTGACAAAGATTTGCAT 27609460
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || || | ||| || || || || || || || || || || || | || |||
Sbjct 10572332 CGAAGGACAAGATGCAGAGTAGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCG 10572273
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691
|| || | || || |||||| | ||||| || ||||||||||| ||||| ||||| |||
Sbjct 10572272 TCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATTCCCTCCTTG 10572213
Query 29692 TCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
|| || ||| |||| ||| ||| | || | || |||||| || ||||| | || ||
Sbjct 10572212 TCCTG-AATCTTTGCTTTTACATTGTCAATCGTATCAGAACTCTCAACTTCCAAGGTAAT 10572154
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||| || || || | ||| || ||||| || |||||
Sbjct 10572153 AGTCTTTCCTGTGAGGGTCTTCACAAAAATTTGCAT 10572118
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||||||| || || || || ||||||||||| || || |||| || |
Sbjct 10550292 ACGAAGAACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCAAGTGTCCTGCC 10550233
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || || || || || | ||||| || || || || || || ||||| || ||
Sbjct 10550232 ATCCTCAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGGATACCTTCCTT 10550173
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | ||| |||||| | || | |||||| || || ||||| | || ||
Sbjct 10550172 GTCCTGGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAACTTCCAAGGTGAT 10550113
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || | || || ||||| ||||||||
Sbjct 10550112 GGTTTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 10550077
>seq13
Length=58321163
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| |||||||| || || |||||||| || |||||||| || || ||||| || || |||
Sbjct 44437634 CCACCCCTCAATCGGAGGACCAAATGGAGTGTGGATTCCTTCTGGATGTTGTAGTCAGCA 44437693
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| || ||| || |||||||| |||||| | || | || ||||| || || ||
Sbjct 44437694 AGGGTACGGCCATCCTCCAGTTGTTTACCAGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 44437753
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | || || ||| | || | || |||||| ||| ||
Sbjct 44437754 ATCCCTTCTTTGTCTTGGATCTTGGCCTTTACATTGTCGATGGTATCAGAACTTTCCACC 44437813
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || || || | ||| || ||||| || |||||
Sbjct 44437814 TCAAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACAAAAATTTGCAT 44437860
>seq10
Length=62175169
Score = 125 bits (138), Expect = 6e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 29578 ACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCG 29637
|||||||| || || || || || || ||||| ||||| || | ||||||| || |||
Sbjct 51861113 ACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGCCAAGGTGCGACCGTCCTCG 51861054
Query 29638 AGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGT 29697
|||||||| || ||| | || | |||||||| || || || || || || ||||||||
Sbjct 51861053 AGTTGTTTCCCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGG 51860994
Query 29698 AATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757
| || ||||| | || | |||||||| ||| ||||| | |||||| || |||
Sbjct 51860993 ATCTTGGCCTTGACGTTGTCAATGGTGTCAGAGCTTTCGACTTCCAAAGTTATGGTCTTG 51860934
Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || | |||||| || || ||||||||
Sbjct 51860933 CCGGTCAGGGTTTTGACGAAGATCTGCAT 51860905
Score = 105 bits (116), Expect = 5e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||||| || | || || |||||||| || ||||| || ||||| || | || |
Sbjct 51861348 ACGCAAGACAAGGTGGAGAGTGGATTCCTTCTGAATATTGTAATCAGCCAAAGTCCTTCC 51861289
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | ||||| ||||| | ||||| ||||||||||| || ||||| || |||||
Sbjct 51861288 ATCTTCCAACTGTTTCCCAGCGAAAATCAACCTTTGCTGATCTGGTGGAATCCCTTCTTT 51861229
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | || ||| | || | || || ||| || || || | |||||
Sbjct 51861228 GTCCTG-AATCTTCGCCTTAACATTGTCGATCGTATCGGAACTCTCCACCTCCAAAGTTA 51861170
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| ||||| ||||| || || || || || ||||||||
Sbjct 51861169 TGGTTTTCCCAGTCAACGTCTTGACGAAAATCTGCAT 51861133
>seq6
Length=51074515
Score = 120 bits (132), Expect = 2e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
|| || ||||||||||| || ||||||||||| |||| ||| ||| || ||||| |||
Sbjct 42745176 TGGAGGGTGGATTCTTTCTGGATGTTATAATCGGCAAGGGTCCGACCGTCTTCGAGCTGT 42745117
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|||||||| | || | | ||||| || || || || || || |||||||| | ||
Sbjct 42745116 TTGCCAGCGAAAATGAGACGCTGCTGGTCGGGTGGGATCCCTTCCTTGTCTTGGATCTTG 42745057
Query 29704 TGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTT 29763
||||| | || | ||||| || ||| || || || ||||| || ||||| ||
Sbjct 42745056 GCCTTGACGTTGTCGATGGTGTCGGAGCTTTCGACCTCGAGTGTTATGGTCTTGCCGGTA 42744997
Query 29764 AAGGTTTTAACAAATATCTGCATTTT 29789
| |||||| ||||| |||||||| ||
Sbjct 42744996 AGGGTTTTCACAAAGATCTGCATCTT 42744971
Score = 113 bits (124), Expect = 3e-20
Identities = 149/204 (73%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
||||| |||||||| ||||| || |||||||| || | ||| | ||| || | ||||
Sbjct 42745404 TGAAGGGTGGATTCCTTTTGGATATTATAATCAGCCAAGGTCCTCCCATCTTCCAATTGT 42745345
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTT 29703
|||||||| | ||||| | || || || || || || || || |||||||| ||| ||
Sbjct 42745344 TTGCCAGCGAAGATCAAACGCTGTTGGTCAGGTGGGATGCCTTCCTTGTCTTG-AATCTT 42745286
Query 29704 TGTTTGACAGTT-TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762
| | | ||| || | ||||| ||| || ||||| || || || || ||||| ||
Sbjct 42745285 GGCCTTAACGTTGTCGATGGTGTCGGAACTCTCGACTTCGAGGGTGATGGTCTTGCCGGT 42745226
Query 29763 TAAGGTTTTAACAAATATCTGCAT 29786
||||||||| ||||| || |||||
Sbjct 42745225 TAAGGTTTTGACAAAGATTTGCAT 42745202
Score = 100 bits (110), Expect = 2e-16
Identities = 154/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| || || ||||| |||||||||||||| || | || |
Sbjct 42745645 ACGAAGAACAAGGTGAAGGGTAGACTCTTTCTGAATGTTATAATCAGCCAAAGTCCTCCC 42745586
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | ||||||||| ||| | || | ||||||||||| || || || || || ||
Sbjct 42745585 ATCTTCCAATTGTTTGCCGGCAAAGATGAGCCTTTGCTGATCAGGTGGGATTCCTTCCTT 42745526
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|| || ||| |||| || ||| | || | || || || ||| || || | || |
Sbjct 42745525 ATCCTG-AATCTTTGCCTTAACATTGTCAATGGTATCGGAGCTTTCAACCTCCAAGGTGA 42745467
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| |||||||| || || || || ||||| ||||||||
Sbjct 42745466 TTGTTTTGCCGGTCAAAGTCTTGACAAAAATCTGCAT 42745430
>seq4
Length=62178258
Score = 118 bits (130), Expect = 8e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| ||||| | ||| || || | || || |||||||| ||||| ||||| || || ||
Sbjct 4510771 CCACCCCTGAGACGGAGAACAAGGTGGAGAGTGGATTCCTTTTGGATGTTGTAGTCGGCT 4510712
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| |||||| || |||||||| || || || | || | | ||| || ||||| ||
Sbjct 4510711 AAGGTGCGGCCGTCTTCGAGTTGCTTACCGGCGAAGATGAGGCGTTGTTGGTCCGGGGGT 4510652
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || ||||||||||| | || ||||||| | || | ||||| ||| || ||
Sbjct 4510651 ATGCCTTCTTTGTCTTGGATCTTGGCTTTGACATTATCGATTGTGTCGGAAGACTCGACC 4510592
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| || ||||| || || || |||| |||||| || || |||||||||
Sbjct 4510591 TCTAGGGTTATGGTCTTCCCGGTTAGGGTTTTCACGAAGATCTGCATT 4510544
>seq3
Length=45765648
Score = 111 bits (122), Expect = 1e-19
Identities = 158/221 (71%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631
|| || ||||||||||| || || ||||||||||| |||||||| | || || | |
Sbjct 27760472 CGAAGAACCAAATGAAGAGTTGACTCTTTTTGAATATTATAATCAGTAAGAGTCCTTCCA 27760413
Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGAT-----CCGGCGGA-ATACCC 29685
|| || ||||||| || ||| | || ||||||||||| | | | ||| ||||||
Sbjct 27760412 TCCTCAAGTTGTTCTCCTGCAAAAATTAATCTTTGCTGGTTTGGGCAAGGGGAGATACCC 27760353
Query 29686 TCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGA 29745
||||| || || | ||| | ||| ||| | || | ||| | ||| || ||||| |
Sbjct 27760352 TCTTTTTCCTGAATTTTGTCTTTCACAATATCAATAGTATTTGAACTCTCAACTTCCAAT 27760293
Query 29746 GTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| ||||| ||||| | |||||||| || ||
Sbjct 27760292 GTAATTGTTTTTCCAGTAAAGGTCTGGACAAATATTTGGAT 27760252
>seq11
Length=62681010
Score = 105 bits (116), Expect = 5e-18
Identities = 155/217 (71%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | ||||| ||||| || |||||||| || ||||| || | || |
Sbjct 1163236 ACGAAGAACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCC 1163295
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || || ||||| |||||| | ||||| ||||||||||| || ||||| || |||||
Sbjct 1163296 ATCTTCCAGCTGTTTCCCAGCAAAAATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTT 1163355
Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
||| || ||| || | ||| || | || | || || || || ||||| | ||| |
Sbjct 1163356 GTCCTG-AATCTTCGCTTTCACGTTATCAATCGTATCCGAGCTCTCCACTTCTAAAGTAA 1163414
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || || || || || || || || || ||||||||
Sbjct 1163415 TCGTCTTACCGGTCAAAGTCTTGACGAAGATCTGCAT 1163451
>seq12
Length=35429946
Score = 96.9 bits (106), Expect = 3e-15
Identities = 106/141 (75%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||| | | | ||| | ||||| ||||| || ||||| ||||||||||| ||
Sbjct 4807175 TCCTCCCCTAAGCCTTAACACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCAGC 4807234
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| ||| || ||| || ||||| || |||||| | ||||| || |||||||| || ||
Sbjct 4807235 TAGGGTTCGGCCATCTTCTAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGAGG 4807294
Query 29679 AATACCCTCTTTGTCTTGTAA 29699
|| |||||||| || || ||
Sbjct 4807295 GATGCCCTCTTTATCCTGGAA 4807315
>seq511
Length=6087
Score = 93.3 bits (102), Expect = 3e-14
Identities = 105/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618
||||||||| | | | ||| | ||||| ||||| || ||||| ||||||||||| ||
Sbjct 482 TCCTCCCCTAAGCCTTAACACTAGGTGAAGAGTGGACTCCTTTTGGATGTTATAATCAGC 423
Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678
| ||| || ||| || ||||| || |||||| | ||||| || |||||||| || ||
Sbjct 422 TAGGGTTCGGCCATCTTCCAGTTGCTTACCAGCAAAAATCAACCTCTGCTGATCAGGAGG 363
Query 29679 AATACCCTCTTTGTCTTGTAA 29699
|| || ||||| || || ||
Sbjct 362 GATGCCTTCTTTATCCTGGAA 342
Score = 93.3 bits (102), Expect = 3e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 29584 TGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGT 29643
||||| ||||| || ||||| ||||||||||| || | ||| || ||| || |||||
Sbjct 5733 TGAAGAGTGGACTCCTTTTGGATGTTATAATCAGCTAGGGTTCGGCCATCTTCTAGTTGC 5674
Query 29644 TTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAA 29699
|| |||||| | ||||| || |||||||| || || || |||||||| || || ||
Sbjct 5673 TTACCAGCAAAAATCAACCTCTGCTGATCAGGAGGGATGCCCTCTTTATCCTGGAA 5618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385214345515794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |