Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20]
1,034 sequences; 761,565,430 total letters
Query= NC_025464.1
Length=44147
Score E
Sequences producing significant alignments: (Bits) Value
seq1034 618 1e-172
seq2 495 1e-135
seq1 383 5e-102
seq8 358 2e-94
seq6 242 1e-59
seq12 239 1e-58
seq4 226 8e-55
seq5 192 2e-44
seq10 114 4e-21
seq11 98.7 3e-16
seq9 82.4 2e-11
>seq1034
Length=160161
Score = 618 bits (684), Expect = 1e-172
Identities = 732/982 (75%), Gaps = 10/982 (1%)
Strand=Plus/Minus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|| ||| ||||| ||||||| || || ||||||||||| ||||| |||||||| ||
Sbjct 1445 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 1386
Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
||||| || | || ||| | || ||| | ||| || ||||| |||||||||||||| |
Sbjct 1385 ATGATCCC-TACCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 1328
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901
|||| ||||| |||||||| || || || |||||| | || ||| ||||| |||||||
Sbjct 1327 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACA 1268
Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959
| || || || || ||| | |||| | | ||| || || || | ||||| |||||
Sbjct 1267 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCA--GCTATAGGTTTGCACTTTTACCC 1210
Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019
|| |||||||| || ||||||||||| | ||||| || || || | | | |
Sbjct 1209 GATCTGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGTTAAT 1150
Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079
|| || |||||| | |||| || | ||||||||| || |||||||||||||| |
Sbjct 1149 TGTTTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTT 1090
Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139
|| || || |||||||||||||| |||||| || |||||||||||||| || || |
Sbjct 1089 CCGTCTGGGTATGCGCCCTTGGATCGCTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 1030
Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199
|| || ||| | |||||||| |||||||||| ||| || | |||||| | ||
Sbjct 1029 CGCTGTTTTCTTGATCTATCCAATTGGTCAAGGAAGTTTTTCTGATGGTATGCCCCTAGG 970
Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259
|| ||| || ||||||| |||| ||||||||||||||||||| |||||||| |||||
Sbjct 969 AATCTCTGGAACTTTCAACTTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCA 910
Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319
||||| |||||| | || || |||||||| |||||||| || ||||| ||||| |||||
Sbjct 909 TCCGTTTCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCA 850
Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378
||||| |||| || || | ||| | | ||||| || ||| | | |||| ||
Sbjct 849 TGGTTC-CTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 791
Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438
| || |||| || || ||||| ||||| |||||||| || || ||||||||||| ||||
Sbjct 790 AAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATT 731
Query 19439 TTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTT 19498
|||| || | || ||||| || || ||||||||| |||||| |||||||||| |
Sbjct 730 TTGGCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCT 671
Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCAT 19558
| |||||||||||||| || || || ||||| |||| | || | ||||| ||||| |
Sbjct 670 TAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTT 611
Query 19559 TCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTG 19618
||||| | || || || || |||||||| || | |||| | | |||||||| |||
Sbjct 610 TCAACCTAAACGGTTTCAATTTTAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTA 551
Query 19619 ATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTA 19678
|||| |||||||| ||| | || ||||||||||| || | || || ||||| |||||||
Sbjct 550 ATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTA 491
Query 19679 ATGCTCATAACTTCCCACTTGA 19700
|||||||||||||||| || ||
Sbjct 490 ATGCTCATAACTTCCCTCTAGA 469
>seq2
Length=62769430
Score = 495 bits (548), Expect = 1e-135
Identities = 676/934 (72%), Gaps = 10/934 (1%)
Strand=Plus/Plus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|| ||| ||| | |||| || || | ||||||||||| ||||| |||||||| |
Sbjct 26980576 TTCTGTAACTAGATAACTAGCACTAAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTA 26980635
Query 18784 ATGATTCCGTGTCTCCTTGCA-GCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
||||| || | || ||| || ||| | ||| || ||||| |||||||||||||| |
Sbjct 26980636 ATGATCCC-TACCTTATTGATCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 26980693
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901
|||| |||| |||||||| || || || |||||| | | ||| ||||| |||||||
Sbjct 26980694 CTCCAATAGATATTGATGGTATTCGTGAACCTGTTTCTAGATCTCTACTTTACGGAAACA 26980753
Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAG--CAGCAATGCCATCGGACTACACTTCTACCC 18959
| || || || |||||| | ||| | | ||| || || || ||||||| |||||
Sbjct 26980754 ATATTATTTCTGGAGCCATTATTCTTACTTCTGCA--GCTATAGGTTTACACTTTTACCC 26980811
Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019
|| |||||||| || ||||||||||| | ||||| || | || | | | |
Sbjct 26980812 GATCTGGGAAGCGGTATCTGTTGATGAATGGTTATACAATGGCGATCCTTATGAGTTAAT 26980871
Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTA 19079
|| || |||||| | |||| || | ||||||||| || |||||||||||||| |
Sbjct 26980872 TGTTTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTT 26980931
Query 19080 TCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTC 19139
||| || | ||||||||||| || |||||| || |||||||||||||| || || |
Sbjct 26980932 TCGTCTGAGTATGCGCCCTTGAATCGTTGTTGCATATTCAGCTCCTGTTGCAGCTGCTAC 26980991
Query 19140 TGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGG 19199
| || ||| | |||||||| |||| ||| | ||| || | |||||| | ||
Sbjct 26980992 CACTGTTTTCTTGATCTATCCAATTGGCCAATGAAGTTTTTTTGATGGTATGCCCCTAGG 26981051
Query 19200 TATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCA 19259
|| ||| || ||||||| |||| |||||||| |||||||||| |||||||| |||||
Sbjct 26981052 AATCTCTGGCACTTTCAACTTCATGATTGTATTCTAGGCTGAACACAACATCCTTATGCA 26981111
Query 19260 CCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCA 19319
|| || |||||| | || || |||||| | ||| |||| || ||||| ||||| |||||
Sbjct 26981112 TCCATTTCACATGTTAGGCGTAGCTGGTTTATTCAGCGGCTCCCTATTCAGTGCTATGCA 26981171
Query 19320 CGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACT 19378
||||| |||| || || | ||| | | ||||| || ||| | | |||| ||
Sbjct 26981172 TGGTTC-CTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATG 26981230
Query 19379 ATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATT 19438
| || ||| || || ||||| ||||| |||||||| || || ||||||||||| ||||
Sbjct 26981231 AAGGTTACTGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGGTTATT 26981290
Query 19439 TTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTT 19498
|||| || | || || || || || |||| |||| |||||| |||||||||| |
Sbjct 26981291 TTGGCCGATTGATCTTACAATATGCTAGTTTCAGCAATTCTCGTTCTTTACATTTCTTCT 26981350
Query 19499 TGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCAT 19558
| |||||||||||||| || || || ||||| |||| | || | ||||| ||||| |
Sbjct 26981351 TAGCTGCTTGGCCTGTAGTAGGTATCTGGTTCACCGCTTTAGGTATTAGCACTATGGCTT 26981410
Query 19559 TCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTG 19618
||||| | || || || || |||||||| ||| | |||| | | |||||||| |||
Sbjct 26981411 TCAACCTAAACGGTTTCAATTTTAACCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTA 26981470
Query 19619 ATACTTGGGCTGACATTCTCAATCGTGCTAACCT 19652
|||| |||||||| ||| | || |||||||||||
Sbjct 26981471 ATACCTGGGCTGATATTATTAACCGTGCTAACCT 26981504
Score = 457 bits (506), Expect = 3e-124
Identities = 696/981 (71%), Gaps = 25/981 (3%)
Strand=Plus/Plus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|||||| | ||| ||||||| || || || |||||||| ||||| |||||||| ||
Sbjct 40943981 TTTTGTAATTGGATAACCAGCACTGAAAATCGTCTTTACATCGGATGGTTTGGTGTTTTG 40944040
Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGTTTCATTATTGCCTTCATTGCTGCACC 18842
||||| || | || ||| | || ||| || || | ||| ||||||||| | || ||
Sbjct 40944041 ATGATCCC-TACCTTATTGACCGCAACTTTTATATTTACTATCGCCTTCATTACAGCTCC 40944099
Query 18843 TCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAA 18902
| | |||| |||||||| || || || |||||| || |||||||
Sbjct 40944100 TACAATAGATATTGATGGTATTCGTGAACCTGTT---------------TACAGAAACAA 40944144
Query 18903 CATCATATCGGGAGCCGTCGTTCCGAGCAGCAAT-GCCATCGGACTACACTTCTACCCAA 18961
|| || || || ||| | |||| | | | | | || || | ||||| ||| | |
Sbjct 40944145 TATTATTTCTGGTGCCATTATTCCTA-CTTCTGTAGTTATAGGTTTGCACTTTTACTCGA 40944203
Query 18962 TTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGG 19021
| ||||||| || ||||||||||| | ||||| || || || | | | | |
Sbjct 40944204 TCAGGGAAGCAGCATCTGTTGATGAATGGTTATACAATGGCGGCCCATATGAGTTAATTG 40944263
Query 19022 TCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATC 19081
| || |||||| | |||| || | ||||||||| || |||||||||||||| ||||
Sbjct 40944264 TTTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG-TATC 40944322
Query 19082 GA-CTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCT 19140
| || || ||||||||||||||| |||||| || ||| ||| | ||| | || |
Sbjct 40944323 CATCTGGGTATGCGCCCTTGGATTGCTGTTGCATATTCAACTCTTATTGTAACTGCTACC 40944382
Query 19141 GCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGT 19200
| || ||| | |||||||| || ||| ||| ||| || | |||||| | ||
Sbjct 40944383 ACTGTTTTCTTAATCTATCCAATTAGTCGAGGAAGTTTTTCTGATGGTATGCCCCTAGGA 40944442
Query 19201 ATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCAC 19260
|| ||| || ||||| | |||| ||||||||||||||||||| |||||||| |||||
Sbjct 40944443 ATCTCTGGCACTTTCAAATTCATGATTGTATTCCAGGCTGAACACAACATCCTTATGCAT 40944502
Query 19261 CCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCAC 19320
||||| |||||||| || || ||| |||| ||||| | || | ||| ||||| |||||
Sbjct 40944503 CCGTTTCACATGCTAGGCGTAGCTAGTGTATTCGGTAGCTC-CCATTCAGTGCTATGCAT 40944561
Query 19321 GGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTA 19379
||||| |||| || || | ||| | | ||||| || ||| | | |||| || |
Sbjct 40944562 GGTTC-CTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGA 40944620
Query 19380 TGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTT 19439
|| || || ||||| || | ||||| |||| ||| || || ||||||||||| |||||
Sbjct 40944621 AGGTTATAAATTTGGTCAGTAGGAAGAAACTTCTAATATCGTAGCTGCTCATGGTTATTT 40944680
Query 19440 TGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTT 19499
||||| | || ||||| || || ||||||||| |||||| |||||||||| ||
Sbjct 40944681 TGGTC-ATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCTT 40944739
Query 19500 GGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATT 19559
|||||||||||| || || || ||||| ||| | || | ||||| ||||| ||
Sbjct 40944740 AGCTGCTTGGCCTAGAGTAGGTATCTGGTTCACCGTTTTAGGTATTAGCACTATGGCTTT 40944799
Query 19560 CAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGA 19619
|||| | || || || || |||||||| ||| | |||| | | ||||||| ||| |
Sbjct 40944800 CAACCTAAACGGTTTCAATTTTAACCAATCCATAGTTGATAGTCAAAGTCGTGTAATTAA 40944859
Query 19620 TACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAA 19679
||| |||||||| ||| | ||| |||||||||| || | || || ||||| ||||||||
Sbjct 40944860 TACCTGGGCTGATATTATTAATTGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAA 40944919
Query 19680 TGCTCATAACTTCCCACTTGA 19700
||||||||||||||| || ||
Sbjct 40944920 TGCTCATAACTTCCCTCTAGA 40944940
Score = 235 bits (260), Expect = 2e-57
Identities = 293/399 (73%), Gaps = 2/399 (1%)
Strand=Plus/Minus
Query 19066 TGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCT 19125
||||||||||| | || || || | || ||||| ||| |||||| || | ||||| |
Sbjct 11753900 TGGGAACTTAGTTTCCGTCTGGGTACGCACCCTTAGATCGCTGTTGCATATTTAGCTCTT 11753841
Query 19126 GTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGAC 19185
||||| || || | || || ||| | || ||||| |||||||||| ||| | ||
Sbjct 11753840 GTTGCAGCTGCTACCGCTGTTTTCTTGATCAATCCAATTGGTCAAGGAAGTTTTTGTGAT 11753781
Query 19186 GCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACAT 19245
| |||||| | || ||| ||| || || |||| |||| |||| ||| ||||||||||
Sbjct 11753780 GGTATGCCCCTAGGAATTTCTGGCACTTTAAACTTCATGATTGTTTTCTAGGCTGAACAC 11753721
Query 19246 AACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTA 19305
|||||||| || || ||||| |||||| | || || |||||| | ||||||| || |||
Sbjct 11753720 AACATCCTTATCCATCCGTTTCACATGTTAGGCGTAGCTGGTATATTCGGCGACTCCCTA 11753661
Query 19306 TTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGA 19364
|| ||||| ||||| ||||| | || || | || | ||| | | ||||| || ||| |
Sbjct 11753660 TTCAGTGCTATGCATGGTTCTTTGGTAACCT-CTAGTTTGATCAGGGAAACCACAGAAAA 11753602
Query 19365 GGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGC 19424
| |||| || | || |||| || || ||||| ||||| |||||||| || || ||
Sbjct 11753601 TGAATCTGCTAATGAAGGTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGC 11753542
Query 19425 TGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGC 19463
||||||||| ||||||||||| | || ||||| || ||
Sbjct 11753541 TGCTCATGGTTATTTTGGTCGATTGATCTTCCAATATGC 11753503
Score = 226 bits (250), Expect = 8e-55
Identities = 229/297 (77%), Gaps = 1/297 (0%)
Strand=Plus/Plus
Query 19404 AGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGC 19463
||| |||||||| || || ||||||||||| |||||||| || | || ||||| || ||
Sbjct 48290110 AGAAACTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGC 48290169
Query 19464 ATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCAT 19523
||||||||| |||||| |||||||||| || |||||||||||||| || || ||
Sbjct 48290170 TAGTTTCAACAATTTTCGTTCT-TACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTAT 48290228
Query 19524 TTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAA 19583
||||| |||| | || | ||||| ||||| |||||| | || || || || |||||
Sbjct 48290229 CTGGTTCACCGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTTAA 48290288
Query 19584 CCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCG 19643
||| ||| | |||| | | |||||||| ||| |||| |||||| | ||| | || ||
Sbjct 48290289 CCAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTAATATTATTAACCG 48290348
Query 19644 TGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700
||||||||| || | || || ||||| ||||||||||||||||||||||| || ||
Sbjct 48290349 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 48290405
Score = 167 bits (184), Expect = 7e-37
Identities = 181/240 (75%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 19468 TTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGG 19527
||||||||| ||||| |||||||||| || ||||||||| ||| || || || |||
Sbjct 47970457 TTCAACAATTCTAGTTCTTTACATTTCTTCTTAACTGCTTGGCGTGTAGTAGGTATCTGG 47970516
Query 19528 TTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAG 19587
|| | || | || | || || ||||| |||||| | ||||| || || ||||||||
Sbjct 47970517 TTCACTGCTTTAGGTATTAGAACTATGGCTTTCAACCTAAATGGTTTCAATTTTAACCAA 47970576
Query 19588 TCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCT 19647
||| | |||| | | ||| |||| ||| |||| | ||||| ||| | |||||||||
Sbjct 47970577 TCCATATTTGATAGTCAAGGTTGTGTAATTAATACCTAAGCTGATATTATTAATCGTGCT 47970636
Query 19648 AACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGATTTGGCT 19707
| ||| || | || || ||||| ||||||||||||||||||||||| ||||| || |||
Sbjct 47970637 ATCCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTTGACTTAGCT 47970696
>seq1
Length=55868233
Score = 383 bits (424), Expect = 5e-102
Identities = 599/854 (70%), Gaps = 2/854 (0%)
Strand=Plus/Plus
Query 18848 TAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCA 18907
|||| |||||||| || || || |||||| | || ||| ||||| |||||| || |
Sbjct 42543287 TAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACAAAAACAATATTA 42543346
Query 18908 TATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAATTTGGG 18967
| || || || | |||| | | || || || | ||||| ||||| || | ||
Sbjct 42543347 TTTCTGGTGCAATTATTCCTACTTCTACAGCTATAGGTTTGCACTTTTACCCGATCTAGG 42543406
Query 18968 AAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCC 19027
|||| | || || |||||||| | ||||| || || | | | | || | |
Sbjct 42543407 AAGCGACATCTATTAATGAATGGTTATACAATGGCAATCCTTATGATTTAATTGTTTAAC 42543466
Query 19028 ACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAG 19087
||||| | |||| || | ||||||||| | |||||||||||||| | || | |
Sbjct 42543467 ACTTCTTACTTGGTGTAGCTTGTTACATGGGCTGTGAGTGGGAACTTAGTTTCCGTCCGG 42543526
Query 19088 GGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCT 19147
| |||| ||||||||| |||||| || ||||||| | |||| || || | || || |
Sbjct 42543527 GTATGCACCCTTGGATCGCTGTTGCATATTCAGCTCATATTGCAGCTGCTACCGCTGTTT 42543586
Query 19148 TCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTG 19207
|| | ||||||||||||||||||| || || | |||||| | || || |
Sbjct 42543587 TCTTGATCTATCCATTTGGTCAAGGAAGTATTTCTGATGGTATGCCCCTAGGAATCTCTA 42543646
Query 19208 GTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCC 19267
| || ||||||| |||| |||||||| |||||||||| |||||||| ||||| ||||| |
Sbjct 42543647 GCACTTTCAACTTCATGATTGTATTCTAGGCTGAACACAACATCCTTATGCATCCGTTTC 42543706
Query 19268 ACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGC 19327
|||| | | || |||||||| |||||| || | || ||||| ||||| |||||
Sbjct 42543707 CCATGTTAGACGTAGCTGGTGTATTCGGCAACTCCTTGTTCAGTGCTATGCATGGTTCCT 42543766
Query 19328 TTGTTACGTCCTCGCTTGTGCGTG-AAACTACTGAAGAGGTATCTCAGAACTATGGCTAC 19386
| || || || | | ||| | | |||| || ||| | | |||| || | || |||
Sbjct 42543767 TGGTAACCTC-TAGTTTGATCAAGGAAACCACAGAAAATGAATCTGCTAATGAAGGTTAC 42543825
Query 19387 AAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGG 19446
| || | ||||| ||||| |||||||| || || | ||||||||| |||||||| ||
Sbjct 42543826 AGATTCAGTCAAGAGGAAGAAACTTATAATATCGTAGTTGCTCATGGTTATTTTGGCCGA 42543885
Query 19447 CTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCT 19506
| || ||||| || || ||||||||| |||||| ||||||| || || |||| |
Sbjct 42543886 TTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTTTTCTTAGCTGAT 42543945
Query 19507 TGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTG 19566
|||| ||| || || |||||||| |||| | | | ||||| ||||| |||||| |
Sbjct 42543946 TGGCATGTAGTAGGTATTTGGTTCACCGCTTTAGCTATTAGCACTATGGCTTTCAACCTA 42544005
Query 19567 AATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGG 19626
|| || || ||| || | ||| | |||| | | |||||||| ||| | || |||
Sbjct 42544006 AACAATTTCAATTTTTACTAATCCGTAGTTGATAGTCAAGGTCGTGTAATTAAAACCTGG 42544065
Query 19627 GCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCAT 19686
||||| ||| | || ||||||||||| || | || || ||||| ||| ||||||| ||
Sbjct 42544066 GCTGATATTATTAACCGTGCTAACCTTGGTATGGAAGTTATGCATGAATATAATGCTTAT 42544125
Query 19687 AACTTCCCACTTGA 19700
|||||||| || ||
Sbjct 42544126 AACTTCCCTCTAGA 42544139
>seq8
Length=57128820
Score = 358 bits (396), Expect = 2e-94
Identities = 445/604 (74%), Gaps = 4/604 (1%)
Strand=Plus/Plus
Query 19051 TACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTT 19110
|||||||| || ||||||||||||| | ||| || || |||||||||||||| ||||
Sbjct 36805072 TACATGGGTCGTAAGTGGGAACTTAGTT-TCGTCTGGGTATGCGCCCTTGGATCGCTGTT 36805130
Query 19111 GCCTACTCAG-CTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCA 19169
|| || | || ||| |||||| || | | | || ||| | |||||||| ||||| |
Sbjct 36805131 GCATATTTAGTCTCATGTTGCAGCTACTACCGTTGTTTTCTTGATCTATCCAATTGGTTA 36805190
Query 19170 AGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGT 19229
||| ||| || | |||||| | || || ||| || ||||||| |||| ||||
Sbjct 36805191 AGGAAGTTTTTCTGATGGTATGCCCCTAGGAATCTCTGGCACTTTCAACTTCATGATTGT 36805250
Query 19230 ATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGT 19289
||||||||||||||| |||||||| ||||| |||| |||||| | || || ||||||||
Sbjct 36805251 ATTCCAGGCTGAACACAACATCCTTATGCATTCGTTTCACATGTTAGGCGTAGCTGGTGT 36805310
Query 19290 GTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCG 19349
|||||||| || ||||| ||||| ||||| ||||| |||| || | || | ||| |
Sbjct 36805311 ATTCGGCGGCTCCCTATTCAGTGCTATGCATGGTTC-CTTGGTAACTTCTAGTTTGATCA 36805369
Query 19350 TG-AAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGA 19408
| |||| || ||| | | |||| || | || |||| || || ||||| ||||| |
Sbjct 36805370 AGGAAACCACAGAAAAAGAATCTGCTAATAAAGGTTACAGATTCGGTCAAGAGGAAGAAA 36805429
Query 19409 CTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCT 19468
||||||| || || ||||||||||| |||||||| || | || ||| | || || |
Sbjct 36805430 CTTATAATATCGTAGCTGCTCATGGTTATTTTGGCCGATTGATCTTCTAATATGCTAGTT 36805489
Query 19469 TCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGT 19528
|||||||| |||||| | |||||||| || | ||||||| ||| || || || | ||
Sbjct 36805490 TCAACAATTCTCGTTCTTTCCATTTCTTCTTAGTGGCTTGGCATGTAGTAGGTATCTAGT 36805549
Query 19529 TTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGT 19588
| |||| | || | ||||| ||||| |||||| | || || || || |||||||| |
Sbjct 36805550 TCACCGCTTTAGGTATTAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTTAACCAAT 36805609
Query 19589 CCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTA 19648
| | |||| | | |||||||| ||| |||| |||||||| ||| | || |||||||
Sbjct 36805610 TCGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTA 36805669
Query 19649 ACCT 19652
||||
Sbjct 36805670 ACCT 36805673
>seq6
Length=51074515
Score = 242 bits (268), Expect = 1e-59
Identities = 391/557 (70%), Gaps = 4/557 (1%)
Strand=Plus/Minus
Query 19098 TTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCTTGTCTA 19157
|||||| |||||| || |||||||||||||| | || | | || ||| | ||||
Sbjct 37650335 TTGGATCGCTGTTGCATATTCAGCTCCTGTTGCAACTGCTACCACTGTTTTCTTGATCTA 37650276
Query 19158 TCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTACGTTCAA 19217
|||| ||||||||| ||| || | ||||| | || || ||| || |||||
Sbjct 37650275 TCCAATTGGTCAAGAAAGTTTTTCTGATGGCATGCCCCTAGGAATCTTTGGCACTTTCAA 37650216
Query 19218 CTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACATGCTCGG 19277
|| ||| ||||| ||||| |||| | |||||||| | ||| ||||| |||||| | ||
Sbjct 37650215 CTTTATGATTGTAATCCAGATTGAATACAACATCCTTACGCATCCGTTTCACATGTTAGG 37650156
Query 19278 TGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTC 19337
|| |||||||| | || ||| || ||||| ||||| || | ||||| | || || |
Sbjct 37650155 CGTAGCTGGTGTATGCGACGGCTCCCTATTCAGTGCTATATATGGTTCATTGGTAACCT- 37650097
Query 19338 CTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGC 19396
|| | ||| | | ||||| || ||| | | || || | | |||| || | |
Sbjct 37650096 CTAGTTTGATCAGGGAAACCACAGAAAATAAACCTGCTAATGAAGATTACAGATTCAGTC 37650037
Query 19397 AAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCC 19456
|||| ||||| |||||||| || || |||||||||| |||||||| || | || ||||
Sbjct 37650036 AAGAGGAAGAAACTTATAATATCGTAGCTGCTCATGATTATTTTGGCCGATTGATCTTCC 37649977
Query 19457 AGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGG 19516
| || | ||||| ||| | |||| |||||||||| || ||||||| |||| | |
Sbjct 37649976 AATATACTAGTTTCAATAATTCTCATTCTTTACATTTCTTCTTAGCTGCTTAGCCTATAG 37649917
Query 19517 TTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTA 19576
| || || ||||| |||| | || | ||||| ||| | |||||||| || || |
Sbjct 37649916 TAGGTATATGGTTCACCGCTTTAGGTATTAGCACTATGACTTTCAACTTAAACAATTTCA 37649857
Query 19577 ACTTTAACCAGTCCCTTCTTGA-CAACAATGGTCGTGTCATTGATACTTGGGCTGACATT 19635
| ||||| || ||| | || | || ||| ||||||| ||| |||| |||| ||| |||
Sbjct 37649856 ATTTTAATCAATCCGTAATTAATCATCAA-AGTCGTGTAATTAATACCTGGGTTGATATT 37649798
Query 19636 CTCAATCGTGCTAACCT 19652
| || |||| ||||||
Sbjct 37649797 ATTAACCGTGTTAACCT 37649781
Score = 168 bits (186), Expect = 2e-37
Identities = 321/469 (68%), Gaps = 4/469 (1%)
Strand=Plus/Plus
Query 18972 TAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTT 19031
|| || | ||||||||| | | ||||| || || || | | | | | || |||||
Sbjct 39117544 TATTTTAATTGATGAATTGTTGTACAATGGCGGTCCTTATGAGTTAATTCTTTTACACTT 39117603
Query 19032 CCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACTAGGGAT 19091
| | |||| | | ||||||||| | |||||||||||||| | | ||||| ||
Sbjct 39117604 CTTACTTGGTATAGCTTGTTACATGGGTCATGAGTGGGAACTTAGTTTCCTTCTAGGTAT 39117663
Query 19092 GCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGTCTTCCT 19151
|||||||||||| |||||| || ||| |||||||||| | || | | || || |
Sbjct 39117664 GCGCCCTTGGATCATTGTTGCATATTCAACTCCTGTTGCAGTTGCTACCGTTGTTTTATT 39117723
Query 19152 TGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATGCCTTTGGGTATTAGTGGTAC 19211
|||||||| |||||||||| ||| | |||||| | || || ||| ||
Sbjct 39117724 GATCTATCCAATTGGTCAAGGAAGTTTTTCTTATTGTATGCCCCTAGGAATCTCTGGCAC 39117783
Query 19212 GTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCCGTTCCACAT 19271
|| |||| |||| | |||||||| |||| || ||||| || ||||| | ||| ||||
Sbjct 39117784 TTTTAACTTCATGATCTTATTCCAGACTGAGCACAACATTCTTATGCATCTGTTTTACAT 39117843
Query 19272 GCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGGTTCGCTTGT 19331
| | | | | |||| |||||||| || ||||| | ||| ||||| ||||| ||||
Sbjct 39117844 ATTAAGCATAGTTAGTGTATTCGGCGGCTCCCTATTCAATGCTATGCATGGTTC-CTTGG 39117902
Query 19332 TACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGT 19390
|| || | ||| | | ||||| || ||| | | |||| || | || |||| |
Sbjct 39117903 TAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTACTAATGAAGGTTACAGAT 39117962
Query 19391 TTGGGCAAGAAGAAGA--GACTTATAACATTGTTGCTGCTCATGGGTAT 19437
| || | ||||||| | |||||||| || | ||||||||||| |||
Sbjct 39117963 TCGGTCGAGAAGAATATCAACTTATAATATCATAGCTGCTCATGGTTAT 39118011
>seq12
Length=35429946
Score = 239 bits (264), Expect = 1e-58
Identities = 585/877 (67%), Gaps = 41/877 (5%)
Strand=Plus/Minus
Query 18731 ACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTGATGATTC 18790
||||| | ||||| || | || |||||||| |||| |||||||| ||||||| |
Sbjct 23256692 ACTGGATTACCAGCACTAAAAATCGTCTTTACATCGAATGGTTTGGTGTTTTGATGATCC 23256633
Query 18791 CGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCACCTCCTGTA 18849
| | || ||| || ||||| || ||||| ||||| |||||| | ||||| ||
Sbjct 23256632 C-TACCTTATTGATCGTAACTTTTGTATTTATTATCGCCTTTATTGCTACTCCTCCAATA 23256574
Query 18850 GACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACAACATCATA 18909
|| |||||||| || || || |||||| || ||| ||||| | |||||| || ||
Sbjct 23256573 GATATTGATGGTATTCGTGAACCTGTTTTTGGATATCTACTTTACGAAAACAATATTATT 23256514
Query 18910 TCGGGAGCCGTCGTTCCGAGCA--GCAATGCCATCGGACTACACTTCTACCCAATTTGGG 18967
| || | | | |||| | ||| || || || | ||||| |||| || ||
Sbjct 23256513 TATGGTGTCATTATTCCTACTTTTGCA--GCTATAGGTTTGCACTTTTACCTGATCTGAA 23256456
Query 18968 AA-GCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTG-TGGTCTT 19025
|| || | | ||||||||||| | ||||| || || | || || || | || ||
Sbjct 23256455 AAAGCGACACCTATTGATGAATGGTTATACAATGGCGGTCT-TTATAAGTTAATTGTTTT 23256397
Query 19026 CCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTATCGACT 19085
||||| | | |||| |||||||||||||| | | | |
Sbjct 23256396 ACACTT-------------TTTACTTA----------GAGTGGGAACTTAGTTTTTGTCA 23256360
Query 19086 AGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGCCTCTGCGGT 19145
| ||||||||||||| |||||| || ||| ||||||||| | || | | ||
Sbjct 23256359 GGATATGCGCCCTTGGACCACTGTTGCATATTCAACTCCTGTTGTAGTTGCTACCACTGT 23256300
Query 19146 CTTCCTTGTCTATCCATTTGGTCAAG---GTTCCTTTAGCGACGCTATGCCTTTGGGTAT 19202
||| | |||||||| ||||| ||| ||| || | || | ||||| | || ||
Sbjct 23256299 TTTCTTGATCTATCCAATTGGTTAAGGAAGTTTCTCT---GATGGTATGCTCGTAGGAAT 23256243
Query 19203 TAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATCCTCATGCACCC 19262
| |||| ||||||| |||| |||||||| |||||||||| |||||||| |||||
Sbjct 23256242 CTCTAGTACTTTCAACTTCATGATTGTATTCTAGGCTGAACACAACATCCTTATGCATAT 23256183
Query 19263 GTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGTGCGATGCACGG 19322
||| |||||| | || | | |||| | |||||||| || ||||| ||||| ||| ||
Sbjct 23256182 GTTTCACATGTTAGGCATAGTTGGTATATTCGGCGGCTCCCTATTCAGTGCTATGTTTGG 23256123
Query 19323 TTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATCTCAGAACTATG 19381
||| | ||||| | || | ||| | | ||||| || ||| | | ||| || |
Sbjct 23256122 TTC-CATGTTAACTTCTAGTTTGATCAGAGAAACCACAGAAAATGAATCCACTAATGGAG 23256064
Query 19382 GCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTG 19441
| || | || | ||||| |||| | |||||| | ||| || ||||| |||||||
Sbjct 23256063 GTTATAGATTCGATCAAGAGAAAGAAATTTATAATACTGTAACTACTCATCATTATTTTG 23256004
Query 19442 GTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGG 19501
| || | || ||||| || | ||||| ||| | |||| ||||||| || || |
Sbjct 23256003 GCCGATTGATCTTCCAATATGTTAGTTTCAAAAATTCTCATTCTTTACATTT-TTCTTAG 23255945
Query 19502 CTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCA 19561
|| |||||| |||||| || || | |||| |||| | || | |||| ||| | ||||
Sbjct 23255944 CTACTTGGCTTGTGGTAGGTATCTAGTTTACCGCTTTAGGTATTAGCAATATGACTTTCA 23255885
Query 19562 ACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGA 19598
||| ||| || || |||||||| ||| | ||||
Sbjct 23255884 GCTTAAATACTTTCAATTTTAACCAATCCGTAGTTGA 23255848
Score = 197 bits (218), Expect = 4e-46
Identities = 324/456 (71%), Gaps = 12/456 (3%)
Strand=Plus/Plus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|| ||| | ||| |||| || || || | |||||||| |||| |||||||| ||
Sbjct 33103830 TTCTGTAATTGGATAACTAGCACTGAAACTCGTCTTTACATCGAATGGTTTGGTGTGTTG 33103889
Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
||||| || | ||| ||| | || ||| | ||| || ||||| |||||||||||||| |
Sbjct 33103890 ATGATCCC-TATCTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTC 33103947
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901
|||| ||||| |||||||| || || || |||||| | || ||| ||||| |||||||
Sbjct 33103948 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTACGGAAACA 33104007
Query 18902 ACATCATATCGGGAGCCGTCGTTCCGAGCAGCAATGCCATCGGACTACACTTCTACCCAA 18961
| || || || || ||| | |||| | | | ||| || || | ||||| |||| |
Sbjct 33104008 ATATTATTTCTGGTGCCATTATTCCTA-CTTC--TGCTATAGGTTTGCACTTTTACCTGA 33104064
Query 18962 TTTGGGAAGCTAATTCACTTGATGAATGGCTCTACA--ACGGGGGACCGTTCCAACTT-G 19018
| |||||||| | || ||||||||||| | |||| | || | | || | ||
Sbjct 33104065 TCTGGGAAGCGACATCTGTTGATGAATGGTTATACAATATTGGCAATCCTTATGAGTTAA 33104124
Query 19019 TGGTCTTCCACTTCCT--CATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAG 19076
| || || |||||| | ||||| || | ||||||||| || ||||||||||||||
Sbjct 33104125 TTGTTTTACACTTCTTACTATTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAG 33104184
Query 19077 CTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGCAGC 19136
| || || || || | |||||||||| |||| | || ||| |||||||||| ||
Sbjct 33104185 TTTCCGTCTGGGTATACTCCCTTGGATTGCTGTTACATATTCAACTCCTGTTGCAATTGC 33104244
Query 19137 CTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGG 19172
|| || ||| | |||||||| ||||||||||
Sbjct 33104245 TATCGCTGTTTTCTTAATCTATCCAATTGGTCAAGG 33104280
Score = 147 bits (162), Expect = 6e-31
Identities = 252/357 (71%), Gaps = 9/357 (3%)
Strand=Plus/Minus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|||||| | ||| |||||| || || ||||||||||| ||||| |||||||| ||
Sbjct 32314312 TTTTGTAATTGGATAACCAACACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 32314253
Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
|||| ||| | | ||| | || ||| ||||| || ||||| ||||||||| |||| |
Sbjct 32314252 ATGA-TCCCTACATTATTGACCGCAACT-TTTGTATTTATTATCGCCTTCATTACTGCTC 32314195
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901
||| ||||| |||||||| || || || |||||| | | ||| ||||| |||||||
Sbjct 32314194 CTCTAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGAATCTCTACTTTACGGAAACA 32314135
Query 18902 ACATCATATCGGGAGCCGTCGTTCCGA--GCAGCAATGCCATCGGACTACACTTCTACCC 18959
| || || || || ||| | |||| | | ||| || || | | ||||| |||||
Sbjct 32314134 ATATTATTTCTGGTGCCATTATTCCTACTTCTGCA--GCTATTCGTTTGCACTTTTACCC 32314077
Query 18960 AATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTCCAACTTGT 19019
|| |||||||| || ||||||||| | | ||||| || || || | | | |
Sbjct 32314076 GATCTGGGAAGCGGCATCTGTTGATGAATAG-TATACAATGGTGGTCCTTATGAGTTAAT 32314018
Query 19020 GGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAG 19076
|| | |||||| | |||| || | ||||||||| || |||| |||||||||
Sbjct 32314017 TGTTTAACACTTCTTACTTGGTGTAACTTGTTACATGGGTCGTGAGTAGGAACTTAG 32313961
>seq4
Length=62178258
Score = 226 bits (250), Expect = 8e-55
Identities = 260/350 (74%), Gaps = 0/350 (0%)
Strand=Plus/Plus
Query 19351 GAAACTACTGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACT 19410
||||| || ||| | | |||| || | | |||| || || ||||| ||||| |||
Sbjct 6177683 GAAACCACAGAAAATGAATCTGCTAATAAATGTTACAGATTCGGTCAAGAGGAAGAAACT 6177742
Query 19411 TATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTC 19470
||||| || || | ||||||||| |||||||| || | || ||||| || || |||
Sbjct 6177743 TATAATATCGTAGTTGCTCATGGTTATTTTGGCCGATTGATCTTCCAATATGCTAGTTTC 6177802
Query 19471 AACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTT 19530
|| ||| |||||| |||||||||| || || |||||||||| || || || |||||
Sbjct 6177803 AATAATTCTCGTTCTTTACATTTCTTCTTAACTACTTGGCCTGTAGTAGGTATCTGGTTC 6177862
Query 19531 GCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCC 19590
|| | | || | ||||| ||||| |||||| | || || || || |||||||| |||
Sbjct 6177863 ACCACTTTAGGTATTAGCACTATGGCTTTCAACCTAAACGGTTTCAATTTTAACCAATCC 6177922
Query 19591 CTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAAC 19650
| |||| | | |||||||| ||| |||| |||||||| ||| | || |||||||||
Sbjct 6177923 GTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAAC 6177982
Query 19651 CTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700
|| || | || || ||||| ||||||||||||||||||||||| || ||
Sbjct 6177983 CTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 6178032
>seq5
Length=64140413
Score = 192 bits (212), Expect = 2e-44
Identities = 287/402 (71%), Gaps = 4/402 (1%)
Strand=Plus/Plus
Query 19300 TCACTATTTAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTGTGCGTG-AAACTAC 19358
|| ||||| ||||| ||||| ||||| | || || || | | ||| | | |||| ||
Sbjct 49880348 TCCCTATTCAGTGCTATGCATGGTTCTTTGGTAACCTC-TAGTTTGATCAAGGAAACCAC 49880406
Query 19359 TGAAGAGGTATCTCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACAT 19418
||| | | |||| || | || || | || || ||||| | ||| ||||||| ||
Sbjct 49880407 AGAAAATGAATCTGCTAATGAAGGTTATAGATTCGGTCAAGA-GTAGAAACTTATAT-AT 49880464
Query 19419 TGTTGCTGCTCATGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAG 19478
|| ||||||| ||| |||||||| || | || || || || || |||||||||
Sbjct 49880465 CGTAGCTGCTCTTGGTTATTTTGGCCGATTGATCTTTCAATATGCTAGTTTCAACAATTC 49880524
Query 19479 CCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCT 19538
|||||| |||||||||| || |||||||||||||| || || || |||| ||| |
Sbjct 49880525 TCGTTCTTTACATTTCTTCTTAGCTGCTTGGCCTGTAGTAGGTATCTGGTCCATCGCTTT 49880584
Query 19539 TGGGGTAAGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGA 19598
| | ||||| ||||| |||||| || || || || |||||||| || | ||||
Sbjct 49880585 AGCTATTAGCACTATGGCTTTCAACCAAAACGGTTTCAATTTTAACCAATCTGTATTTGA 49880644
Query 19599 CAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTT 19658
| | |||||||| ||| |||| |||||||| ||| | || ||||||||||| || |
Sbjct 49880645 TAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAACCGTGCTAACCTTGGTAT 49880704
Query 19659 TGAGGTAATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700
| || ||||| ||||| || |||||||||| ||| || ||
Sbjct 49880705 GAAAGTTATGCATGAACGAAAAGCTCATAACTACCCTCTAGA 49880746
Score = 109 bits (120), Expect = 2e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 19503 TGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAA 19562
|||||||| ||| || || || | ||| ||| | || | | ||| || || |||||
Sbjct 8904749 TGCTTGGCATGTAGTCGGTATCTAGTTCATCGCTTTAGGTATTAACACTATAGCTTTCAA 8904808
Query 19563 CTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATAC 19622
|| ||| | || || |||||||| | | |||| | | ||| |||| ||| |||
Sbjct 8904809 TTTAAATAGTTTCAATTTTAACCAATTTGTAGTTGATAGTCAAGGTAGTGTAATTAATAT 8904868
Query 19623 TTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGC 19682
||||| ||| ||| | ||||| |||||||| || | || || ||||| |||| ||||||
Sbjct 8904869 TTGGGTTGATATTATTAATCGAGCTAACCTTGGTATGGAAGTTATGCATGAACATAATGC 8904928
Query 19683 TCATAACTTCCCACTTGA 19700
|||||||||||| || ||
Sbjct 8904929 TCATAACTTCCCTCTAGA 8904946
Score = 95.1 bits (104), Expect = 3e-15
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 19546 AGCACCATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAAT 19605
||||| ||||| |||||| | || | ||||| |||||| | || | || | | |
Sbjct 36123718 AGCACTATGGCTTTCAACCTAAACGATTTTAATTTTAACTAATCTGTAGTTAATAGTTAA 36123659
Query 19606 GGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTA 19665
|| |||| ||| ||| | || ||| ||| | |||||||||||||| | | || ||
Sbjct 36123658 AGTTGTGTAATTAATAGATAGGTTGATATTATTAATCGTGCTAACCTTAGTATGGAAGTT 36123599
Query 19666 ATGCACGAACGTAATGCTCATAACTTCCCACTTGA 19700
||||| ||||||||||||||||||||||| || ||
Sbjct 36123598 ATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 36123564
Score = 89.7 bits (98), Expect = 1e-13
Identities = 116/155 (75%), Gaps = 4/155 (3%)
Strand=Plus/Plus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|| ||| ||||| ||||||| || || ||||||||||| ||||| |||||||| ||
Sbjct 49880086 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 49880145
Query 18784 ATGATTCCGTGTCTCCTT-GCAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
|||| ||| | || || | | ||| | ||| || ||| | || ||||||||||| |
Sbjct 49880146 ATGA-TCCCTACCTTGTTAACCTCAACT-TCTGTATTTATTGTCGCATTCATTGCTGCTC 49880203
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTT 18876
|||| ||||| ||||||| || || || ||||||
Sbjct 49880204 CTCCAGTAGATCTTGATGGTATTCGTGAACCTGTT 49880238
>seq10
Length=62175169
Score = 114 bits (126), Expect = 4e-21
Identities = 151/204 (74%), Gaps = 4/204 (2%)
Strand=Plus/Plus
Query 18724 TTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTTGGAACACTG 18783
|| ||| ||||| ||||||| || || ||||||||||| ||||| |||||||| ||
Sbjct 15728431 TTCTGTAACTGGATAACCAGCACTGAAAACCGTCTTTACATCGGATGGTTTGGTGTTTTG 15728490
Query 18784 ATGATTCCGTGTCTCCTTG-CAGCTACTATTTGT-TTCATTATTGCCTTCATTGCTGCAC 18841
||||| || | || ||| | || ||| ||||| || ||||| |||||||||||| | |
Sbjct 15728491 ATGATACC-TACCTTATTGACCGCAACT-TTTGTATTTATTATCGCCTTCATTGCTACTC 15728548
Query 18842 CTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTTTATGGAAACA 18901
|||| ||||| ||||||| || || || |||||| | | || ||||| ||||||
Sbjct 15728549 CTCCAGTAGATATTGATGATATTCGTGAACCTGTTTCTAGATCTCCACTTTACAGAAACA 15728608
Query 18902 ACATCATATCGGGAGCCGTCGTTC 18925
| || || | || ||| | ||||
Sbjct 15728609 ATATTATTTTTGGTGCCATTGTTC 15728632
>seq11
Length=62681010
Score = 98.7 bits (108), Expect = 3e-16
Identities = 205/305 (67%), Gaps = 9/305 (3%)
Strand=Plus/Plus
Query 19393 GGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCATGGGTATTTTGGTCGGCTTATT 19452
|| ||| | ||||| |||||||| ||||| ||| | ||| |||||||| || | ||
Sbjct 23641422 GGTCAAAAGGAAGAAACTTATAATATTGTAGCTATTTATGATTATTTTGGCCGATTGATC 23641481
Query 19453 TTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACATTTCTTTTTGGCTGCTTGGCCT 19512
||| | | || |||||| || |||| | |||||||||| || ||||||||| |
Sbjct 23641482 TTCGAATT-GCTAGTTTCAACCATTTTCGTTATTTACATTTCTTCTTAACTGCTTGGCAT 23641540
Query 19513 GTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCACCATGGCATTCAACTTGAATGGC 19572
|| || | || | ||| ||| | | | | || | ||| |||||||| ||| |
Sbjct 23641541 GTAGTAAGTATCTAGTTCACCGTTTTAGATATTAACATTAAGGCTTTCAACTTAAATAGT 23641600
Query 19573 TTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCGTGTCATTGATACTTGGGCTGAC 19632
|| || ||||||| | | | || | | | | |||| | ||| |||| | | ||||
Sbjct 23641601 TTCAATCTTAACCAATTCGTAGTTAATAGTTAAGATCGTATAATTAATACCTTGACTGAT 23641660
Query 19633 ATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCACGAACGTAATGCTCATAACTTC 19692
|| |||||||||| || | || || |||| || ||||||||||||||||
Sbjct 23641661 AT--------GTGCTAACCTTGGTATGGAAGTTTTGCATGACAGTAATGCTCATAACTTT 23641712
Query 19693 CCACT 19697
|| ||
Sbjct 23641713 CCTCT 23641717
>seq9
Length=70713020
Score = 82.4 bits (90), Expect = 2e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 19021 GTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTAT 19080
|| || |||||| | |||| || | |||||||||| || |||||||||||||| | |
Sbjct 68697815 GTTTTACACTTCTTACTTGGTGTAGCTTCTTACATGGGCCGTGAGTGGGAACTTAGTTTT 68697874
Query 19081 CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCCGC 19133
|| | || ||||| |||||||| | |||| || ||| |||||||||| ||
Sbjct 68697875 CGTTTGGGTATGCGGCCTTGGATCACTATTGCATATTCAACTCCTGTTGCAGC 68697927
Score = 80.6 bits (88), Expect = 8e-11
Identities = 83/109 (76%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 19021 GTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAACTTAGCTAT 19080
|| || |||||| | |||| || | ||||||||| || |||||||||| ||| | |
Sbjct 68673272 GTTTTACACTTCTTACTTGGTGTAGCTTGTTACATGGGCCGTGAGTGGGAACCTAGTTTT 68673331
Query 19081 CGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTG 19129
|| | || ||||| |||||||| |||||| || |||||||||||||
Sbjct 68673332 CGTTTGGGTATGCGGCCTTGGATCGCTGTTGCATATTCAGCTCCTGTTG 68673380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 141147066869172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |