Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gossypium_20raimondii_20[refseq_20GCF_5F000327365.1_202012-12-20] 1,034 sequences; 761,565,430 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq9 136 4e-27 seq2 114 1e-20 seq11 113 4e-20 seq10 113 4e-20 seq4 93.3 4e-14 seq3 93.3 4e-14 seq13 91.5 1e-13 >seq9 Length=70713020 Score = 136 bits (150), Expect = 4e-27 Identities = 148/195 (76%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || || || ||||| | || |||| |||||| || ||||| Sbjct 66887544 CTCCTTCTGGATATTGTAGTCTGCTAAAGTTCGACCATCCTCCAACTGCTTCCCAGCAAA 66887603 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | ||||| | |||||||||| ||||| |||| | | Sbjct 66887604 GATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCCTGAATCTTAGCTTTCACATT 66887663 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| |||| |||||||||| ||||| ||||| || |||||||| || Sbjct 66887664 GTCAATCGTGTCCGAGCTC---TCCACCTCCAGGGTGATGGTTTTCCCAGTCAAAGTCTT 66887720 Query 35722 CACAAATATCTGCAT 35736 ||| ||||||||||| Sbjct 66887721 CACGAATATCTGCAT 66887735 Score = 132 bits (146), Expect = 4e-26 Identities = 147/195 (75%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| ||||| | ||||| | || |||| |||||| || ||||| Sbjct 66881162 CTCCTTCTGGATATTGTAGTCGGCTAGAGTTCGACCATCCTCCAACTGCTTCCCAGCAAA 66881221 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||||||| ||||||||| | |||| | |||||||||| ||||| |||| | | Sbjct 66881222 TATCAACCTCTGCTGGTCTGGTGGAATCCCCTCCTTGTCCTGAATCTTCGCTTTCACATT 66881281 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | |||||| |||| |||||||||| ||||| ||||| || ||||| || || Sbjct 66881282 GTCGATCGTGTCTGAGCTC---TCCACCTCCAGGGTGATTGTTTTCCCGGTCAAGGTCTT 66881338 Query 35722 CACAAATATCTGCAT 35736 ||| ||||||||||| Sbjct 66881339 CACGAATATCTGCAT 66881353 Score = 122 bits (134), Expect = 8e-23 Identities = 159/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584 || |||||||| | || |||||||| ||||| || || || | || | | | || Sbjct 66881370 AAAACCAAATGCAGGGTCGATTCCTTTTGGATGTTATAGTCTGCAAGTGTCCTCCCATCC 66881429 Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 || |||||||| || ||||| ||||||| ||||||||| | ||||| | |||||||||| Sbjct 66881430 TCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTCC 66881489 Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCG-TGTC---GCTCGATTCCACCTCCACCGTGAT 35700 ||| ||| |||| ||| || | |||| |||| || ||||||| ||||| Sbjct 66881490 -TGAATTTTCGCTTTGACATTGTCAATGGTGTCCGAGCTC---TCGACCTCCAGGGTGAT 66881545 Query 35701 CGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||||| ||||| || ||||| ||||||||||| Sbjct 66881546 GGTTTTACCGGTCAAGGTCTTCACGAATATCTGCAT 66881581 Score = 120 bits (132), Expect = 3e-22 Identities = 159/217 (73%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 ||| |||||||| | || |||||||| ||||| || || || | || | | | || Sbjct 66887751 CAAAACCAAATGCAGAGTGGATTCCTTTTGGATGTTATAGTCCGCAAGCGTCCTCCCATC 66887810 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || |||||||| || ||||| ||||||| ||||||||| | ||||| | ||||||||| Sbjct 66887811 CTCAAGCTGCTTTCCGGCAAAAATCAACCTCTGCTGGTCTGGAGGAATCCCCTCCTTGTC 66887870 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCG-TGTC---GCTCGATTCCACCTCCACCGTGA 35699 | ||| ||| |||| | ||| || | |||| |||| || ||||||| || | Sbjct 66887871 C-TGAATTTTCGCTTTAACATTGTCAATGGTGTCCGAGCTC---TCGACCTCCAGTGTTA 66887926 Query 35700 TCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | |||||||| ||||| || || || ||||||||||| Sbjct 66887927 TGGTTTTACCAGTCAAGGTCTTAACGAATATCTGCAT 66887963 Score = 118 bits (130), Expect = 1e-21 Identities = 145/197 (74%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||| ||||| || | || | | | || || || ||||| || ||||| Sbjct 66888000 CTCCTTTTGGATGTTATAATCCGCAAGCGTCCTCCCATCCTCGAGTTGCTTTCCAGCAAA 66888059 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||||||| | || | | ||||||||| |||||| ||||| | Sbjct 66888060 AATCAACCTCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGGATCTTGGCCTTCACGTT 66888119 Query 35665 TGCCACCGTGTCG---CTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| ||| |||||||||| || || ||||| || ||||||||||| Sbjct 66888120 ATCAATTGTGTCTGAACTC---TCCACCTCCAATGTAATAGTTTTTCCAGTCAAAGTTTT 66888176 Query 35722 CACAAATATCTGCATTC 35738 |||||| |||||||||| Sbjct 66888177 CACAAAAATCTGCATTC 66888193 Score = 118 bits (130), Expect = 1e-21 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | || ||||||||| | || ||||||||| ||||| ||||| | Sbjct 66888191 TTCCACCACGCAGTCGCAGCACCAAATGCAGGGTTGACTCCTTTTGGATGTTATAATCCG 66888250 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | | || | | | || || |||||||| || ||||| |||| || |||||| || | | Sbjct 66888251 CTAGTGTCCTCCCATCCTCGAGCTGCTTTCCGGCAAAAATCAGCCTCTGCTGATCTGGTG 66888310 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCG---CTCGATT 35684 ||| | |||||||||| ||||| ||| | | | | | || || ||| | Sbjct 66888311 GAATACCCTCCTTGTCCTGAATCTTGGCCTTAACATTATCAATGGTATCAGAACTC---T 66888367 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||||| ||||| ||||| || || | ||||| |||||||||||||| Sbjct 66888368 CCACCTCCAAAGTGATGGTTTTTCCGGTGAGGGTTTTTACAAATATCTGCAT 66888419 Score = 109 bits (120), Expect = 5e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | ||||||||||| | || ||||| |||||||| || || || Sbjct 66881811 CCACCACGGAGACGTAACACCAAATGGAGGGTCGATTCCTTCTGAATGTTATAGTCCGCA 66881870 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || |||||||| || ||||| ||||||| ||||||||||| || Sbjct 66881871 AGAGTTCGGCCATCTTCAAGCTGCTTTCCAGCAAAAATCAACCTCTGCTGGTCCGGTGGG 66881930 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||| ||| ||||| ||| | | | | | ||| || ||| ||| Sbjct 66881931 ATCCCTTCCTTATCCTGAATCTTGGCCTTAACATTATCAATCGTATCAGAACTC---TCC 66881987 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| ||| || ||||| || || | ||||| ||||| |||||||| Sbjct 66881988 ACCTCCAACGTAATAGTTTTTCCGGTGAGGGTTTTTACAAAAATCTGCAT 66882037 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||||||||||||||| || |||| || ||||| || || || || Sbjct 65273372 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 65273313 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664 || | ||||||||||| | || | || ||||||| | ||| ||| | ||||| | | Sbjct 65273312 ATAAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGT-CTTGAATTTTAGACTTCACATT 65273254 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || || || | ||||| || || || || || ||||| Sbjct 65273253 ATCGATGGTGTCGGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTT 65273197 Query 35722 CACAAATATCTGCAT 35736 || || |||||||| Sbjct 65273196 GACGAAGATCTGCAT 65273182 Score = 93.3 bits (102), Expect = 4e-14 Identities = 140/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||||||||||||||| || |||| || ||||| || || || || Sbjct 65273600 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAG 65273541 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664 || | ||||||||||| | || | || ||||||| | ||| ||| | ||| | | | Sbjct 65273540 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGT-CTTGAATTTTAGACTTTACATT 65273482 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| |||| || || || | ||||| || || || || |||||||| Sbjct 65273481 ATCGATGGTGTCAGAGCTC---TCGACTTCGAGGGTGATGGTCTTGCCGGTTAAAGTTTT 65273425 Query 35722 CACAAATATCTGCAT 35736 || || |||||||| Sbjct 65273424 GACGAAGATCTGCAT 65273410 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 35539 CGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACC 35598 |||| ||| || || ||||||||||| || | ||| || | || || || || ||||| Sbjct 66888450 CGTAGACTCTTTCTGGATGTTGTAATCAGCGAGGGTCCGGCCATCTTCAAGTTGTTTACC 66888509 Query 35599 CGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTT 35658 ||||| || | || ||| ||||| | ||| | | |||||||| |||||| ||| Sbjct 66888510 TGCAAAGATAAGCCTCTGTTGGTCTGGAGGGATCCCTTCCTTGTCTTGGATCTTGGCCTT 66888569 Query 35659 CAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | | | | | ||| || ||||||||| | ||||| || || || || | || Sbjct 66888570 GACATTATCAATCGTATCAGAACTTTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGT 66888629 Query 35719 TTTCACAAATATCTGCAT 35736 |||||||||||||||||| Sbjct 66888630 TTTCACAAATATCTGCAT 66888647 Score = 89.7 bits (98), Expect = 5e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || |||||||||||||||||||| || |||| || ||||| || || || || Sbjct 65273144 TCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAG 65273085 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGT 35664 || | ||||||||||| | || | || ||||||| | ||| ||| | ||||| | | Sbjct 65273084 ATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGT-CTTGAATTTTAGACTTCACATT 65273026 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||||| ||| || ||||| | ||||| || || || || | ||||| Sbjct 65273025 GTCGATGGTGTCAGAACTC---TCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTT 65272969 Query 35722 CACAAATATCTGCAT 35736 || || |||||||| Sbjct 65272968 GACGAAGATCTGCAT 65272954 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || ||||||||||| || | ||||| | || || ||||| ||||| ||||| Sbjct 66882302 CTCTTTCTGGATGTTGTAATCCGCAAGAGTTCGGCCATCTTCAAGCTGTTTACCGGCAAA 66882361 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||| ||||| | || | | |||||||| |||||| ||| | | | Sbjct 66882362 GATAAGCCTCTGTTGGTCTGGTGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 66882421 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | || ||| ||||||||| | ||||| || || || || | ||||||||| Sbjct 66882422 ATCAATTGTATCGGAACTTTCCACCTCGAGGGTGATAGTCTTGCCAGTAAGAGTTTTCAC 66882481 Query 35725 AAATATCTGCAT 35736 ||||||||||| Sbjct 66882482 GAATATCTGCAT 66882493 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || |||||||| ||||| || || || | | | || |||| ||||| || ||||| Sbjct 65274285 CTCTTTCTGAATGTTATAATCAGCTAAAGTCCTCCCATCCTCCAATTGCTTGCCAGCAAA 65274226 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||| || | || | | ||||||||| |||||| ||||| | | Sbjct 65274225 GATGAGCCTTTGCTGATCTGGGGGGATACCTTCCTTGTCCTGAATCTTTGCCTTCACATT 65274166 Query 35665 TGCCACCGTGTCGCTCGA---TTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | || || ||| ||||||||||| ||||| ||||| || ||||| || || Sbjct 65274165 GTCAATTGTATC---CGAACTTTCCACCTCCAATGTGATTGTTTTCCCAGTCAATGTCTT 65274109 Query 35722 CACAAATATCTGCAT 35736 || || |||||||| Sbjct 65274108 AACGAAAATCTGCAT 65274094 >seq2 Length=62769430 Score = 114 bits (126), Expect = 1e-20 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | |||||||||||| | ||| ||||||||||||||| || || || Sbjct 10572116 CCACCACGAAGACGCAACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGCA 10572057 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||||| | || || ||||| || || ||||| || |||| ||||||||| | || Sbjct 10572056 AGGGTTCTGCCATCTTCAAGCTGTTTCCCAGCAAAAATTAACCTCTGCTGGTCTGGTGGG 10571997 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | || |||||||||| ||||| ||| | | | | || || ||| ||| Sbjct 10571996 ATGCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTATCAATTGTATCAGAACTC---TCC 10571940 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||| | ||||| ||||| || || | ||||| ||||| |||||||| Sbjct 10571939 ACCTCTAAAGTGATGGTTTTTCCAGTGAGCGTTTTTACAAAGATCTGCAT 10571890 Score = 109 bits (120), Expect = 5e-19 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || |||||||||||||||||| || || Sbjct 10550303 CCACCACGAAGACGAAGAACCAAATGGAGGGTCGACTCCTTTTGAATGTTGTAGTCTGCA 10550244 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || | | || || |||||||||||||| || ||||||| ||| ||||| | ||| Sbjct 10550243 AGTGTCCTGCCATCCTCAAGCTGCTTACCCGCGAAAATCAACCTCTGTTGGTCTGGAGGG 10550184 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATTCC 35686 | | ||||||||| ||| || ||| | | | | | ||||| |||| || Sbjct 10550183 ATACCTTCCTTGTCCTGGATTTTGGCCTTGACATTGTCAATAGTGTCGGAGCTC---TCA 10550127 Query 35687 ACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| ||||| ||||| || || | ||| |||||||| |||||||| Sbjct 10550126 ACTTCCAAGGTGATGGTTTTCCCGGTAAGAGTCTTCACAAAAATCTGCAT 10550077 Score = 105 bits (116), Expect = 6e-18 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||||||| | || |||||||| ||||||||||| || Sbjct 10550075 CCACCACGAAGACGAAGCACCAAATGGAGGGTGGATTCCTTTTGGATGTTGTAATCAGCG 10550016 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || || |||||||| ||||| ||||||| ||| ||||| | ||| Sbjct 10550015 AGAGTGCGGCCATCTTCAAGTTGCTTACCGGCAAAGATCAACCTCTGTTGGTCTGGGGGA 10549956 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGA--TTCCA 35687 | | |||||||||| |||||| ||| | | ||| || | || || | || | Sbjct 10549955 ATACCCTCCTTGTCCTGGATCTTAGCCTTGACA-TTGTCAATG-GTATCTGAACTCTCAA 10549898 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| || || || || || || | ||| ||||||||||| ||||| Sbjct 10549897 CCTCCAAAGTAATGGTCTTTCCGGTAAGAGTCTTCACAAATATTTGCAT 10549849 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| ||||| | | | ||||||||| | || ||||||||| ||||||||||| | Sbjct 10549621 TTCCTCCACGAAGGCGGAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAATCAG 10549562 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 ||| ||| || | || || || |||||||| ||||| || | | ||||||||| | || Sbjct 10549561 CCAGGGTACGGCCATCTTCTAGTTGCTTACCGGCAAAGATAAGTCTCTGCTGGTCTGGAG 10549502 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684 | | | || ||||| |||||| ||| | | | | | ||||| ||| || Sbjct 10549501 GGATCCCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATGGTGTCCGAGCT---TT 10549445 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||| | ||||| || || || || | || || ||||| || ||||| Sbjct 10549444 CCACCTCGAGGGTGATAGTCTTGCCGGTGAGGGTCTTAACAAAGATTTGCAT 10549393 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/197 (71%), Gaps = 1/197 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| || || | ||| || | || || ||||| || || || || Sbjct 10571397 CTCCTTTTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCAAGCTGTTTCCCGGCGAA 10571338 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||| ||||| | || | | |||||||| |||||| ||| | | | Sbjct 10571337 GATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCCTTGTCTTGGATCTTGGCCTTGACATT 10571278 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||||||||| | ||||| || ||||| || | ||||||||| Sbjct 10571277 ATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTACCAGTAAGAGTTTTCAC 10571218 Query 35725 AAATATCTGCATTCTGT 35741 ||| ||||||| ||||| Sbjct 10571217 AAAGATCTGCA-TCTGT 10571202 >seq11 Length=62681010 Score = 113 bits (124), Expect = 4e-20 Identities = 145/196 (74%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||||||||||||||| || |||| || ||||| || || || || Sbjct 1163944 CTCCTTTTGGATGTTGTAATCGGCCAAGGTCCGGCCGTCTTCGAGCTGTTTTCCGGCGAA 1164003 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | ||| | || ||||| || ||| || ||||| || Sbjct 1164004 GATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCTTGGATTTTGGCCTTCA-CGT 1164062 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | |||||| |||| || ||||| | |||||||| || || || | ||| | Sbjct 1164063 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGTGTGATCGTCTTGCCGGTTAGAGTCT 1164119 Query 35721 TCACAAATATCTGCAT 35736 | || || |||||||| Sbjct 1164120 TAACGAAGATCTGCAT 1164135 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||||||||| |||||||| ||||| || | | || |||||||| || || ||||| Sbjct 1163260 CTCCTTTTGAATATTGTAATCAGCCAAAGTCCTTCCATCTTCCAGCTGTTTCCCAGCAAA 1163319 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| ||||| || | |||| | || |||||| ||||| |||| | Sbjct 1163320 AATCAACCTTTGCTGATCTGGTGGAATTCCTTCTTTGTCCTGAATCTTCGCTTTCACGTT 1163379 Query 35665 TGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTT 35721 | | ||| || |||| ||||| || | || ||||| ||||| |||||||| || Sbjct 1163380 ATCAATCGTATCCGAGCTC---TCCACTTCTAAAGTAATCGTCTTACCGGTCAAAGTCTT 1163436 Query 35722 CACAAATATCTGCAT 35736 || || |||||||| Sbjct 1163437 GACGAAGATCTGCAT 1163451 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| ||||||||||| || |||| || || || || || || || Sbjct 1163716 CTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCGTCTTCGAGTTGTTTTCCGGCGAA 1163775 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || |||||||| | || | || |||||||| |||| || || | | || Sbjct 1163776 GATGAGACGTTGCTGGTCTGGGGGGATGCCTTCCTTGTCTTGGATC-TTCGCCTTAACGT 1163834 Query 35665 TG-CCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 || | | |||||| |||| || ||||| | ||||| || || || ||||| |||| Sbjct 1163835 TGTCGATCGTGTCGGAGCTC---TCGACCTCGAGAGTGATTGTCTTGCCGGTCAAGGTTT 1163891 Query 35721 TCACAAATATCTGCAT 35736 |||| || || ||||| Sbjct 1163892 TCACGAAGATTTGCAT 1163907 >seq10 Length=62175169 Score = 113 bits (124), Expect = 4e-20 Identities = 166/231 (72%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||| |||||||| | || |||||| || ||||||||||||||| Sbjct 51861131 CCACCACGAAGCCTCAATACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCGGCC 51861072 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || |||| || || || || || ||||| || | || |||||||| | || Sbjct 51861071 AAGGTGCGACCGTCCTCGAGTTGTTTCCCGGCAAAGATGAGCCTTTGCTGGTCTGGTGGG 51861012 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTC---GCTCGATTC 35685 | || |||||||| |||||| ||| | |||| | | ||||| ||| ||| Sbjct 51861011 ATGCCTTCCTTGTCTTGGATCTTGGCCTTGA-CGTTGTCAATGGTGTCAGAGCT---TTC 51860956 Query 35686 CACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || |||| || || || || || |||| ||||| || || |||||||| Sbjct 51860955 GACTTCCAAAGTTATGGTCTTGCCGGTCAGGGTTTTGACGAAGATCTGCAT 51860905 >seq4 Length=62178258 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||| ||||| ||||| || |||| || || |||||||| || || Sbjct 4510735 TCCTTTTGGATGTTGTAGTCGGCTAAGGTGCGGCCGTCTTCGAGTTGCTTACCGGCGAAG 4510676 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 || | || || ||||||| || | || || ||||| |||||| || | | | Sbjct 4510675 ATGAGGCGTTGTTGGTCCGGGGGTATGCCTTCTTTGTCTTGGATCTTGGCTTTGACATTA 4510616 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| || || ||||| | || || || || || || | |||||||| Sbjct 4510615 TCGATTGTGTCGGAAGACTCGACCTCTAGGGTTATGGTCTTCCCGGTTAGGGTTTTCACG 4510556 Query 35726 AATATCTGCATTCT 35739 || ||||||||||| Sbjct 4510555 AAGATCTGCATTCT 4510542 >seq3 Length=45765648 Score = 93.3 bits (102), Expect = 4e-14 Identities = 157/221 (71%), Gaps = 5/221 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| || || || ||||||||| ||||| || ||| | Sbjct 27760706 CCACCACGGTGGCGCAACACCAGGTG-AAGGTCGACTCCTTTTGGATGTTATAGCCGGTC 27760648 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | | || || ||||||||||| ||||| || | || ||||||||||| || Sbjct 27760647 AATGTCCTCCCATCTTCAAGCTGCTTACCAGCAAAGATTAGCCTTTGCTGGTCCGAGTGA 27760588 Query 35630 A-CGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCA-CCGTGTCGCTCGATTCCA 35687 | ||| | |||||| |||||| ||||| |||| || ||||| ||| | Sbjct 27760587 ATAGCT-TTCTTGTCTTGGATCTTCACCTTCA-CGTTGTCAGTGGTGTCTGAACTTTCAA 27760530 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAAT 35728 ||||| ||||| || || || |||| ||| ||||||||| Sbjct 27760529 ACTCCAATGTGATTGTCTTTCCTGTCAGAGTCTTCACAAAT 27760489 >seq13 Length=58321163 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/196 (71%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| || | ||| | | | || || |||||||| || ||||| Sbjct 44436985 CTCCTTCTGGATGTTGTAATCTGCAAGGGTCCTCCCATCCTCTAGCTGCTTTCCAGCAAA 44437044 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAG 35663 ||||| || ||||||||| | ||| | | ||||| | | ||| ||| | ||| | | Sbjct 44437045 TATCAGCCTCTGCTGGTCTGGAGGGATACCTTCCTTAT-CTTGAATTTTGGCCTTAACAT 44437103 Query 35664 TTGCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTT 35720 | | | ||||| |||| || || |||| ||||| || || || || | || | Sbjct 44437104 TATCGATTGTGTCAGAGCTC---TCAACTTCCAGGGTGATGGTCTTCCCGGTAAGTGTCT 44437160 Query 35721 TCACAAATATCTGCAT 35736 ||||||| |||||||| Sbjct 44437161 TCACAAAAATCTGCAT 44437176 Score = 91.5 bits (100), Expect = 1e-13 Identities = 160/232 (69%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||| ||||| | | | |||||| || | || |||||| || ||||||||||| | Sbjct 44437404 TTCCTCCACGGAGGCGAAGCACCAAGTGGAGTGTGGACTCCTTCTGGATGTTGTAATCAG 44437463 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 |||| || || | || || || |||||||| || || |||| || |||||||| | | Sbjct 44437464 CCAATGTGCGGCCATCCTCAAGTTGCTTACCAGCGAAGATCAGCCTTTGCTGGTCTGGGG 44437523 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTC---GCTCGATT 35684 | | || ||||||||| ||||| ||| | | | | | ||| || ||| | Sbjct 44437524 GGATGCCTTCCTTGTCCTGAATCTTGGCCTTGACATTGTCAATCGTATCAGAACTC---T 44437580 Query 35685 CCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||||||||| ||||| || || || || | || || ||||| || ||||| Sbjct 44437581 CCACCTCCAATGTGATGGTCTTTCCGGTGAGGGTCTTGACAAAAATTTGCAT 44437632 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/194 (70%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 ||||| || ||||||||||| || | ||| | | | || || || ||||| || ||||| Sbjct 44436758 TCCTTCTGGATGTTGTAATCTGCAAGGGTCCTCCCATCTTCAAGTTGCTTCCCAGCAAAA 44436817 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 |||| || ||||||||| | || | | ||||| ||| |||||| ||| | | | Sbjct 44436818 ATCAGCCTCTGCTGGTCTGGTGGGATTCCTTCCTTATCCTGGATCTTGGCCTTAACATTA 44436877 Query 35666 GCCACCGTGTC---GCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTC 35722 | | |||||| |||| || || |||| ||||| || || || |||| || ||| Sbjct 44436878 TCAATCGTGTCTGAGCTC---TCAACTTCCAGGGTGATGGTCTTTCCAGTCAGGGTCTTC 44436934 Query 35723 ACAAATATCTGCAT 35736 || || || ||||| Sbjct 44436935 ACGAAAATTTGCAT 44436948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450787773492720