Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12]
1,528 sequences; 3,027,844,945 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq4 149 5e-31
seq12 122 7e-23
seq15 120 3e-22
seq16 116 3e-21
seq8 100 2e-16
seq1 98.7 8e-16
seq11 84.2 2e-11
>seq4
Length=178899001
Score = 149 bits (164), Expect = 5e-31
Identities = 169/226 (75%), Gaps = 2/226 (1%)
Strand=Plus/Plus
Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009
|||||| ||||| | ||||| ||||| ||| ||||||||||| ||||| || ||||| |
Sbjct 81195864 CCCCTC--AGCCTCAACACCAGATGCAGAGTCGACTCCTTTTGGATGTTGTAATCCGCAA 81195921
Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069
| || | |||| |||| |||||| |||||| | || || |||||||||||| || |
Sbjct 81195922 GAGTCCTGCCGTCTTCCAACTGTTTACCCGCAAAGATGAGCCTCTGCTGGTCCGGTGGGA 81195981
Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129
|| |||||||| ||||||| |||||| | | ||| ||| || | ||| |
Sbjct 81195982 TACCCTCCTTGTCCTGGATCTTTGCTTTCACGTTGTCGATAGTGTCGGAGCTCTCGACCT 81196041
Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||| ||| |||||||| ||||| || || || ||||| ||||||||
Sbjct 81196042 CCAAGGTGATGGTCTTACCGGTCAAGGTCTTAACAAAGATTTGCAT 81196087
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || ||||| | || || | |||| |||||||||||| || |||||||| || ||
Sbjct 81195633 CCACCACGCAGACGAAGAACAAGGTGCAGAGTGGACTCCTTCTGGATGTTATAATCAGCA 81195692
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | | || |||||||| ||||||||| | || | ||||||||||| ||
Sbjct 81195693 AGCGTACGCCCATCTTCCAGCTGCTTGCCCGCAAAGATCAACCTCTGCTGGTCTGGTGGA 81195752
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| ||||| ||||| | ||| || || | |||| |
Sbjct 81195753 ATCCCCTCCTTGTCCTGAATCTTCGCCTTCACATTATCGATTGTGTCCGAGCTCTCCACT 81195812
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||||||||||| ||||| ||||| || || || || |||||
Sbjct 81195813 TCCAAAGTAATGGTCTTTCCGGTCAACGTCTTCACGAAGATCTGCAT 81195859
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||| | ||| |||||||| || ||||| || || ||
Sbjct 81196545 CCACCACGAAGACGGAGGACCAAATGGAGAGTTGACTCCTTCTGGATGTTGTAATCAGCT 81196604
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| ||| || |||| || || ||||| || || | || | || |||||||| |||
Sbjct 81196605 AGAGTTCGGCCGTCTTCGAGTTGTTTTCCAGCGAAGATCAATCGTTGCTGGTCTGGGGGG 81196664
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| |||||| || || | | ||| || ||| | ||
Sbjct 81196665 ATTCCTTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGCTTTCAACC 81196724
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | |||||| |||||||| |||| ||||||||||| || |||||
Sbjct 81196725 TCGAGGGTAATCGTCTTGCCAGTTAGGGTTTTGACAAAGATCTGCAT 81196771
>seq12
Length=166489593
Score = 122 bits (134), Expect = 7e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || |||| | ||||| ||||| ||| |||||||| || ||||| || |||||
Sbjct 157664015 CCACCACGAAGCCGCAACACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGCT 157664074
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | |||| || |||||||| || || |||| || | ||||||||| ||
Sbjct 157664075 AGGGTTCTGCCGTCTTCGAGCTGTTTTCCGGCGAAAATTAGCCGTTGCTGGTCCGGTGGA 157664134
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| ||||||| ||||| | | ||| || || || ||
Sbjct 157664135 ATGCCTTCCTTGTCCTGGATCTTTGCCTTCACGTTGTCGATCGTGTCGGAGGATTCGACC 157664194
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|||| || || ||||| || |||| ||||| || || || ||||||||
Sbjct 157664195 TCCAACGTGATCGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 157664244
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||| | || |||||||| || ||||| ||||||||
Sbjct 69697752 CCACCACGGAGGCGGAGGACCAAATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGCT 69697811
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | |||||||||||||||| || || | || || | || |||||| ||
Sbjct 69697812 AGGGTTCTGCCGTCCTCCAGCTGTTTTCCGGCGAAGATGAGGCGTTGTTGGTCCGGTGGG 69697871
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||| ||||| ||| || || || | | ||| || || || ||
Sbjct 69697872 ATGCCTTCTTTGTCTTGGATTTTGGACTTTACGTTGTCGATTGTGTCTGAGGATTCGACC 69697931
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| | ||| || || ||||| ||||| ||||| || || || ||||||
Sbjct 69697932 TCTAGGGTTATTGTTTTGCCCGTTAAGGTTTTTACGAAGATCTGCATT 69697979
>seq15
Length=171247636
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| ||||||||||| | ||| | || ||||||||||| ||||| ||||| |
Sbjct 34348135 TTCCTCCTCTGAGCCTGAGCACAAGATGAAGGGTTGACTCCTTTTGGATGTTGTAGTCGG 34348076
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| | ||| || |||| || ||||| || || ||| | || | ||| |||||||| |
Sbjct 34348075 CTAAGGTACGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGAG 34348016
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| || || | | ||| |||||| |||
Sbjct 34348015 GGATCCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCGATTGTATCAGAACTCTCGA 34347956
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || ||||||||||||||||| ||||| ||||| || |||||
Sbjct 34347955 CCTCGAGAGTGATGGTCTTGCCGGTTAAAGTTTTCACAAAGATCTGCAT 34347907
Score = 118 bits (130), Expect = 9e-22
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||||||||||| | ||| | ||||||||||| || ||||| ||||| |||
Sbjct 26151853 CCTCCTCTAAGCCTGAGCACAAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCTGCC 26151912
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| || || |||| || |||||||| || ||| | ||||| ||||||||||| ||
Sbjct 26151913 AAAGTACGGCCGTCTTCAAGCTGTTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGG 26151972
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||| ||||| ||||| || || | | | | |||||| ||| |
Sbjct 26151973 ATGCCTTCTTTGTCCTGAATCTTGGCCTTGACATTGTCAATTGTATCAGAACTCTCAACT 26152032
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| | || |||||||||||||| | ||||| || || || ||||||
Sbjct 26152033 TCAAGAGTGATGGTCTTGCCGGTAAGAGTTTTCACGAAAATCTGCATT 26152080
Score = 116 bits (128), Expect = 3e-21
Identities = 163/229 (71%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| ||||||||||| | ||| | || ||||||||||| ||||| ||||| |
Sbjct 26152079 TTCCACCTCTGAGCCTGAGCACGAGATGAAGGGTTGACTCCTTTTGGATGTTGTAGTCGG 26152138
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| | ||| || |||| || ||||| || || || | || | ||| |||||||| |
Sbjct 26152139 CTAAGGTACGGCCGTCTTCAAGCTGCTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGAG 26152198
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| || || | | ||| ||||| |||
Sbjct 26152199 GGATCCCCTCCTTGTCTTGGATCTTGGCCTTAACGTTGTCGATTGTATCGGAACTCTCTA 26152258
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||| |||||||| ||||| ||||| ||||||||
Sbjct 26152259 CCTCAAGGGTGATGGTCTTTCCGGTTAAAGTTTTCACAAAAATTTGCAT 26152307
Score = 114 bits (126), Expect = 1e-20
Identities = 162/227 (71%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009
|||||| ||||||||||| | || | ||| |||||||| || ||||| ||||| ||||
Sbjct 34230955 CCCCTC--AGCCTGAGCACAAGGTGAAGAGTTGACTCCTTCTGGATGTTGTAGTCAGCCA 34230898
Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069
|| || |||| || |||||||| || ||| | ||||| ||||||||||| || |
Sbjct 34230897 AAGTACGGCCGTCTTCAAGCTGTTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGA 34230838
Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129
||||| ||||| ||||| || || | | | | |||||| ||| |
Sbjct 34230837 TCCCTTCTTTGTCCTGAATCTTGGCCTTGACATTGTCAATTGTATCAGAACTCTCGACCT 34230778
Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
| | || |||||||| |||||||| ||||| || || |||||||||
Sbjct 34230777 CAAGAGTGATGGTCTTCCCGGTTAAAGTTTTCACGAAAATTTGCATT 34230731
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
||| ||||| || || | || || | || | |||||||| || |||||||| |||||
Sbjct 34231874 GTTACCCCCACGGAGACGAAGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTC 34231815
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
||| || || | | ||||| ||||| || |||||| | || || ||||||||||||
Sbjct 34231814 CGCAAGCGTGCGTCCATCCTCAAGCTGCTTACCCGCAAAGATCAGCCTCTGCTGGTCCGG 34231755
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
|| | |||||||||||| ||||| ||||| | | | | |||||| | |||
Sbjct 34231754 TGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCAATCGTATCAGAGCTCTC 34231695
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
| || | || || |||||||| || || || || ||||| || |||||
Sbjct 34231694 CACCTCAAGCGTTATAGTCTTGCCAGTCAAAGTCTTCACAAAAATCTGCAT 34231644
Score = 111 bits (122), Expect = 1e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004
||| ||||| || || | || || | || | |||||||| || |||||||| |||||
Sbjct 34349277 GTTACCCCCACGGAGACGAAGGACAAGGTGGAGGGTGGACTCTTTCTGAATGTTGTAGTC 34349218
Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064
||| || || | | ||||| ||||| || |||||| | || || ||||||||||||
Sbjct 34349217 CGCAAGCGTGCGTCCATCCTCAAGCTGCTTACCCGCAAAGATCAGCCTCTGCTGGTCCGG 34349158
Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124
|| | |||||||||||| ||||| ||||| | | | | |||||| | |||
Sbjct 34349157 TGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCAATCGTATCAGAGCTCTC 34349098
Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
| || | || || |||||||| || || || || ||||| || |||||
Sbjct 34349097 CACCTCAAGCGTTATAGTCTTGCCAGTCAAAGTCTTCACAAAAATCTGCAT 34349047
Score = 107 bits (118), Expect = 2e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006
|||| |||| |||||||| || | ||| | || ||||||||||| ||||| ||||| |
Sbjct 34230732 TTCCTCCTCTGAGCCTGAGTACAAGATGAAGGGTTGACTCCTTTTGGATGTTGTAGTCGG 34230673
Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066
| | ||| || |||| || ||||| || || ||| | || | ||| |||||||| |
Sbjct 34230672 CTAAGGTACGGCCGTCTTCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGAG 34230613
Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126
| | || |||||||| |||||| || || | | | | |||||| |||
Sbjct 34230612 GGATCCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCAATTGTATCAGAACTCTCGA 34230553
Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||| |||||||| ||||| ||||| || |||||
Sbjct 34230552 CCTCGAGAGTGATGGTCTTTCCGGTTAAAGTTTTCACAAAGATCTGCAT 34230504
Score = 105 bits (116), Expect = 6e-18
Identities = 160/227 (70%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009
|||||| ||||||||||| | || | ||| |||||||| |||||||| ||||| || |
Sbjct 34348358 CCCCTC--AGCCTGAGCACAAGGTGAAGAGTTGACTCCTTCTGAATGTTGTAGTCAGCTA 34348301
Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069
|| || |||| || |||||||| || ||| | ||||| ||||||||||| || |
Sbjct 34348300 ATGTACGGCCGTCTTCAAGCTGTTTACCGGCAAAGATAAGCCTCTGCTGGTCTGGTGGGA 34348241
Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTT 21129
||||| ||||| ||||| || || | | | | |||||| ||| ||
Sbjct 34348240 TCCCTTCTTTGTCCTGAATCTTAGCCTTTACATTGTCAATTGTATCAGAACTCTCAACTT 34348181
Query 21130 CCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
| | || ||||||||||| || | ||||| || || || ||||||
Sbjct 34348180 CAAGAGTGATGGTCTTGCCAGTAAGAGTTTTCACGAAAATCTGCATT 34348134
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| ||||| || | ||||||| ||| | |||||||||||| |||||||| ||||| ||
Sbjct 26151169 CCACCTCGAAGACGAAGCACCAAATGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGCT 26151228
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| |||| || |||| || || || || || ||| | ||||| ||||||||||| ||
Sbjct 26151229 AAGGTTCGGCCGTCTTCAAGTTGCTTCCCTGCAAAGATAAGCCTCTGCTGGTCTGGCGGG 26151288
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| || || |||||| ||||| | | | | || || | || |
Sbjct 26151289 ATCCCTTCTTTATCTTGAATCTTTGCCTTCACATTGTCAATGGTGTCGGAGCTTTCAACT 26151348
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || |||||||| || || | || ||||| || || |||||
Sbjct 26151349 TCCAAAGTGATGGTCTTCCCAGTGAGAGTCTTGACGAAAATCTGCAT 26151395
Score = 91.5 bits (100), Expect = 1e-13
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005
|| ||||| || || | || || | || | |||||||||||||||||||| |||||
Sbjct 26150938 TTACCCCCACGGAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCT 26150997
Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065
|| || || | | ||||||||||| || || ||| | || | ||||||||||||
Sbjct 26150998 GCAAGAGTGCGTCCATCCTCCAGCTGCTTCCCTGCAAAGATCAACCTCTGCTGGTCCGGT 26151057
Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125
|| | |||||||||||| ||||| ||||| | | | | ||||| | ||||
Sbjct 26151058 GGGATGCCTTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCAATTGTATCCGAGCTCTCC 26151117
Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || ||||| || || | || || || || || |||||
Sbjct 26151118 ACCTCAAGCGTTATAGTCTTCCCAGTCAGAGTCTTCACGAAAATCTGCAT 26151167
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||||||||||| | ||| | ||||||||||| |||||||| ||||| ||
Sbjct 34231186 CCTCCTCTAAGCCTGAGCACAAGATGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGGCT 34231127
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| || || | || || |||||||| || ||| | || | || ||||||||| ||
Sbjct 34231126 AAAGTACGGCCATCTTCAAGCTGTTTACCAGCAAAGATCAATCGCTGCTGGTCAGGTGGG 34231067
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| || || || |||||| || || | | | || || | || |
Sbjct 34231066 ATGCCCTCTTTATCTTGGATCTTAGCCTTGACATTATCAATGGTGTCTGAGCTTTCAACT 34231007
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || ||||| |||||||| || || ||||| || |||||
Sbjct 34231006 TCCAAAGTGATTGTCTTTCCGGTTAAAGTCTTAACAAAGATCTGCAT 34230960
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| ||||||||||| | ||| | ||||||||||| |||||||| ||||| ||
Sbjct 34348589 CCTCCTCTAAGCCTGAGCACAAGATGGAGTGTGGACTCCTTCTGAATGTTGTAGTCGGCT 34348530
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| || || | || || |||||||| || ||| | || | || ||||||||| ||
Sbjct 34348529 AAAGTACGGCCATCTTCAAGCTGTTTACCGGCAAAGATCAATCGCTGCTGGTCAGGTGGG 34348470
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| || || || |||||| || || | | | || || | || |
Sbjct 34348469 ATGCCCTCTTTATCTTGGATCTTAGCCTTGACATTATCAATGGTGTCTGAGCTTTCAACT 34348410
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || ||||| |||||||| || || ||||| || |||||
Sbjct 34348409 TCCAAAGTGATTGTCTTTCCGGTTAAAGTCTTAACAAAGATCTGCAT 34348363
>seq16
Length=188620566
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| | ||| | ||||| ||||| ||| |||||||| || ||||| ||||||||
Sbjct 106906439 CCACCTCTTAACCTCAACACCAGATGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGCA 106906380
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | |||| || |||||||| || || | || || |||||||||||| ||
Sbjct 106906379 AGAGTGCGACCGTCTTCGAGCTGTTTCCCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGG 106906320
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| |||||||| |||||| || || | | ||| || || | || |
Sbjct 106906319 ATGCCCTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAGCTTTCGACT 106906260
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || ||||||||||||| |||||||| || || |||||
Sbjct 106906259 TCCAGAGTGATTGTCTTGCCGGTTAGGGTTTTGACGAAGATCTGCAT 106906213
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || || ||| || | |||| |||||| ||||| || ||||| || || |||
Sbjct 29321736 CCTCCTCTCAACCGGAGAACAAGGTGCAGAGTGGATTCCTTCTGGATGTTGTAATCGGCC 29321795
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| |||| || | ||||| ||||| || || || | || || |||||||||||| ||
Sbjct 29321796 AAGGTTCGGCCATCCTCGAGCTGCTTTCCAGCGAAGATGAGCCTCTGCTGGTCCGGTGGA 29321855
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||| || ||| || | | | | || ||| | ||| |
Sbjct 29321856 ATACCTTCCTTGTCTTGGATTTTAGCTTTGACATTGTCAATGGTGTCAGAGCTCTCAACT 29321915
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| || ||||| ||||| | |||||||| || || |||||
Sbjct 29321916 TCAAGGGTGATTGTCTTTCCGGTGAGAGTTTTGACGAAGATCTGCAT 29321962
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/228 (71%), Gaps = 6/228 (3%)
Strand=Plus/Minus
Query 20950 CCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCA 21009
|||||| | ||| | ||| | ||||| ||| || ||||||||||| || || || ||||
Sbjct 106906664 CCCCTC--AACCTCAACACAAGATGCAGAGTCGATTCCTTTTGAATATTGTAATCAGCCA 106906607
Query 21010 GGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCA 21069
| || | | ||||| ||||| ||||| || |||| | |||||||||||| || |
Sbjct 106906606 GCGTACGCCCATCCTCGAGCTGCTTGCCAGCGAAAATCAACCTCTGCTGGTCCGGTGGAA 106906547
Query 21070 CGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC-CG-T 21127
|| ||||| || ||||| ||||| | | | | |||| ||| ||| ||
Sbjct 106906546 TCCCCTCCTTATCTTGAATCTTCGCCTTCACATTGTCAATCGTAT--CCGAACTCTCGAC 106906489
Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| ||||| ||||| || || ||||| ||||| ||||| |||||
Sbjct 106906488 CTCCAGAGTAATCGTCTTCCCAGTCAACGTCTTGACGAATATCTGCAT 106906441
Score = 93.3 bits (102), Expect = 4e-14
Identities = 163/237 (69%), Gaps = 3/237 (1%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | ||||||||||||||| ||||| ||||| ||
Sbjct 106906211 CCACCACGGAGACGGAGGACCAAGTGGAGAGTGGACTCCTTTTGGATGTTGTAGTCGGCG 106906152
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|| || | |||| || || ||||| || || | || || ||||||||||| |||
Sbjct 106906151 AGAGTGCGACCGTCTTCGAGTTGTTTTCCAGCGAAGATGAGCCTCTGCTGGTCTGGGGGA 106906092
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||||||||| ||| || || || | | ||| || || |||
Sbjct 106906091 ATTCCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATTGTGTCGGAACTCTCGACC 106906032
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT---TTTGAAT 21182
|| | || || |||||||| |||| |||||||| || || ||||| |||||||
Sbjct 106906031 TCGAGAGTGATTGTCTTGCCAGTTAGGGTTTTGACGAAGATCTGCATCTGTTTGAAT 106905975
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007
||| || || || | ||| || | ||| | || |||||||| || ||||| || |||||
Sbjct 29321279 TCCACCACGGAGACGGAGAACAAGATGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGC 29321338
Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067
|| ||| | | || |||||||| || || ||| | || || |||||||||||| ||
Sbjct 29321339 CAAGGTACGCCCATCTTCCAGCTGCTTTCCAGCAAAGATGAGCCTCTGCTGGTCCGGTGG 29321398
Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127
| || ||||| || |||||| || || | | | | ||||| |||
Sbjct 29321399 GATACCCTCCTTATCTTGGATCTTCGCCTTGACGTTGTCAATGGTATCCGAACTCTCAAC 29321458
Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || |||||||| || || ||||| || ||||| || |||||
Sbjct 29321459 CTCCAAAGTGATGGTCTTTCCAGTCAACGTCTTCACAAAGATCTGCAT 29321506
Score = 84.2 bits (92), Expect = 2e-11
Identities = 139/201 (69%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 20972 ATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTG 21031
||||||||| |||||||| ||||| ||||| ||| || || | || |||| |||
Sbjct 146055191 ATGCAAAGTAGACTCCTTCTGAATATTATAAACCGGCAAAGTCCTCCCATCTTCCAACTG 146055132
Query 21032 TTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTT 21091
|| || ||| ||||||| ||||| || ||| || | ||||| || || | |||
Sbjct 146055131 CTTCCCAGCAAAAATAAGCCTCTGTTGATCCGGTGGAATACCTTCTTTATCCTAAAACTT 146055072
Query 21092 TTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGT 21151
||| || | ||| ||| ||| ||| || | |||||||||||||||||
Sbjct 146055071 AGCTTTGACGTTATCGATAGTGTCAGAACTCTCGACCTCTAACGTAATGGTCTTGCCGGT 146055012
Query 21152 TAACGTTTTGACAAATATTTG 21172
||| |||||||| || || ||
Sbjct 146055011 TAAGGTTTTGACGAAGATCTG 146054991
>seq8
Length=153252196
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || |||| ||||| | || | ||| ||||| || || ||||| ||||| ||
Sbjct 2509530 CCACCGCGTAGCCGCAGCACAAGGTGGAGAGTCGACTCTTTCTGGATGTTGTAGTCGGCT 2509471
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | |||| || |||||||| || || | || || | ||| |||||| ||
Sbjct 2509470 AGGGTTCTGCCGTCTTCAAGCTGTTTTCCGGCGAAGATGAGACGCTGTTGGTCCGGTGGG 2509411
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| |||||||||||| ||||| ||||| | | ||| || || || |||
Sbjct 2509410 ATGCCTTCCTTGTCTTGAATCTTGGCCTTCACGTTGTCGATCGTGTCGGAGGATTCCACC 2509351
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTT 21178
|||| || || ||||| || |||| ||||| || || || ||||||||
Sbjct 2509350 TCCAATGTGATCGTCTTACCCGTTAGGGTTTTCACGAAGATCTGCATTTT 2509301
>seq1
Length=153905722
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||| | || |||||||| || ||||| ||||| ||
Sbjct 17864800 CCACCACGGAGACGGAGGACCAAATGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGCT 17864741
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| | |||| || ||||| ||||| ||| | || | |||||||||||| ||
Sbjct 17864740 AGGGTTCTGCCGTCTTCAAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGG 17864681
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||| ||||| || ||||||| ||| || | | | | || || ||
Sbjct 17864680 ATGCCCTCCTTATCCTGGATCTTTGCTTTGACATTGTCAATGGTGTCGGAACTTTCAACC 17864621
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|||| || || ||||||||||| || || || ||||| || |||||
Sbjct 17864620 TCCAAAGTGATCGTCTTGCCGGTCAATGTCTTCACAAAGATCTGCAT 17864574
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| |||| || ||| ||||||| ||| | || || ||||| ||||||||||| ||||||
Sbjct 17865028 CCACCTCTCAACCTCAGCACCAAATGAAGCGTAGATTCCTTCTGAATGTTATAATCCGCC 17864969
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| || | | || ||||||||||| || ||| | || || ||||| ||||| ||
Sbjct 17864968 AAAGTCCGCCCATCTTCCAGCTGTTTACCGGCAAAGATCAGCCTCTGTTGGTCTGGTGGG 17864909
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| || || |||||| || || | | | | ||||| | ||| |
Sbjct 17864908 ATCCCTTCTTTATCTTGAATCTTTGCCTTGACATTGTCAATCGTATCCGAGCTCTCAACT 17864849
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || |||||||| || || ||||| || ||||| || |||||
Sbjct 17864848 TCAAGAGTGATGGTCTTTCCAGTCAACGTCTTAACAAAGATCTGCAT 17864802
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| ||| | |||||||||||| || ||||| || ||||||
Sbjct 17864572 CCTCCACGGAGACGGAGGACCAGATGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGCC 17864513
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
| |||| | | || || || || || || || | || || ||||||||||| ||
Sbjct 17864512 AAGGTTCTGCCATCTTCGAGTTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCTGGTGGA 17864453
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| ||||| ||||| ||| || ||| || | | ||| | ||| ||| |
Sbjct 17864452 ATACCTTCTTTGTCTTGGATTTTAGCTTTGACATTGTCGATCATGTCAGAACTCTCTACT 17864393
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || ||||| ||||| | |||||| ||||| || |||||
Sbjct 17864392 TCAAGAGTGATTGTCTTTCCGGTGAGCGTTTTAACAAAGATCTGCAT 17864346
>seq11
Length=168460249
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 20960 CCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGC 21019
||||||||| | ||| | || |||||||| || |||||||| ||||||| || | |
Sbjct 109472734 CCTGAGCACAAGATGAAGCGTAGACTCCTTCTGGATGTTATAATCCGCCAAAGTACGACC 109472793
Query 21020 GTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTT 21079
|| |||| |||||| || ||| | || | | |||||||||| || | ||| || ||
Sbjct 109472794 ATCATCCAACTGTTTTCCGGCAAAGATCAACCGCTGCTGGTCCGGCGGGATGCCCTCTTT 109472853
Query 21080 GTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAAT 21139
|| ||||| || || | ||| ||||| |||| |||| || ||
Sbjct 109472854 ATCCTGAATCTTGGCCTTGACGTTATCGATGGTATCCGAACTCTCCTCCTCCAACGTGAT 109472913
Query 21140 GGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
||||| ||||| | || || ||||||||||||||
Sbjct 109472914 AGTCTTTCCGGTGAGGGTCTTCACAAATATTTGCAT 109472949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422251336478048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |