Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12]
1,528 sequences; 3,027,844,945 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq12 86.0 1e-11
>seq12
Length=166489593
Score = 86.0 bits (94), Expect = 1e-11
Identities = 107/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 243476 AGCTACCATTCGAAACGGTCAAACAAATCAT-CACAGAAGCAGTTGAAAACGAAAAGGAA 243534
|||| || || |||| |||| | |||| | ||| ||||||||||||| || | |||
Sbjct 16892678 AGCTTCCTTTGGAAAAGGTCGATGAAATAGTGCAC-GAAGCAGTTGAAATAGAGACCGAA 16892620
Query 243535 TTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAG 243594
||| |||| || | |||||||| |||||||||||||||| | ||||||| | ||
Sbjct 16892619 TTCGTTTGTGAGTCGCTTCCATGCGCGCTTATTGGCATGAACGCGACACTCATGAGCCAA 16892560
Query 243595 TACATCGAATTCGTAGCCGACCGC 243618
||||| | || || || ||||||
Sbjct 16892559 TACATAAAGTTTGTTGCTGACCGC 16892536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102858408366800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |