Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 7e-13 >seq4 Length=178899001 Score = 89.7 bits (98), Expect = 7e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 126594 ATACCAGAAATTGGAGACAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 126652 ||||| |||| ||||| || ||| || | || |||| | | ||||||||| ||||| Sbjct 168204034 ATACCTCAAATCGGAGATAAGTTTAGTAGTAGACATGGTC-AGAAAGGAACTGTGGGTAT 168204092 Query 126653 GATTTATGCACAAGAAGATATGCCGTTTACACAATCAGGTATGACCCCCGATATTATAAT 126712 || ||| |||||||||| ||||| | || |||||| || |||||||||||| | Sbjct 168204093 GACTTACACACAAGAAGACATGCCATGGACGGTTGAAGGTATCACTCCCGATATTATAGT 168204152 Query 126713 TAATCCAAATTGTATACCGTCAAGAATGACCAT 126745 || ||| || ||| |||||| | |||||||| Sbjct 168204153 CAACCCACATGCTATCCCGTCACGTATGACCAT 168204185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658390624498880