Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq1527 91.5 5e-14 seq544 91.5 5e-14 seq453 91.5 5e-14 seq359 91.5 5e-14 seq327 91.5 5e-14 seq314 91.5 5e-14 seq286 91.5 5e-14 seq11 91.5 5e-14 seq10 91.5 5e-14 seq9 91.5 5e-14 seq8 91.5 5e-14 seq7 91.5 5e-14 seq5 91.5 5e-14 seq4 91.5 5e-14 seq2 91.5 5e-14 seq760 84.2 8e-12 >seq1527 Length=151101 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 36378 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 36437 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 36438 TGCTCTACCCCGC 36450 >seq544 Length=19261 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 3019 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 2960 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 2959 TGCTCTACCCCGC 2947 >seq453 Length=21337 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 7728 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 7787 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 7788 TGCTCTACCCCGC 7800 >seq359 Length=23868 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 506 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 565 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 566 TGCTCTACCCCGC 578 >seq327 Length=25441 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 3137 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 3078 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 3077 TGCTCTACCCCGC 3065 >seq314 Length=26061 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 20960 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 21019 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 21020 TGCTCTACCCCGC 21032 >seq286 Length=27643 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 12490 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 12431 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 12430 TGCTCTACCCCGC 12418 >seq11 Length=168460249 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 25897820 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 25897879 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 25897880 TGCTCTACCCCGC 25897892 >seq10 Length=246315975 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 25126998 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 25126939 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 25126938 TGCTCTACCCCGC 25126926 >seq9 Length=209865144 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 107594118 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 107594059 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 107594058 TGCTCTACCCCGC 107594046 >seq8 Length=153252196 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 8600274 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 8600333 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 8600334 TGCTCTACCCCGC 8600346 >seq7 Length=103871911 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 84776483 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 84776424 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 84776423 TGCTCTACCCCGC 84776411 >seq5 Length=219053782 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 170261758 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 170261699 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 170261698 TGCTCTACCCCGC 170261686 >seq4 Length=178899001 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 21197958 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 21198017 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 21198018 TGCTCTACCCCGC 21198030 >seq2 Length=180951721 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 69779269 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 69779328 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 69779329 TGCTCTACCCCGC 69779341 Score = 91.5 bits (100), Expect = 5e-14 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| ||| Sbjct 104339300 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 104339241 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 104339240 TGCTCTACCCCGC 104339228 Score = 87.8 bits (96), Expect = 7e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||||| | |||| ||| ||||||||| | |||||||| ||| Sbjct 126352937 TTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGAGAGCTACCAAAC 126352996 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 126352997 TGCTCTACCCCGC 126353009 >seq760 Length=15178 Score = 84.2 bits (92), Expect = 8e-12 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||||| | | |||| ||| ||||||||| |||||||||| ||| Sbjct 5509 TTGCGGAGACAGGATTTGAACC-GTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAAC 5451 Query 50171 TGCTCTACTCCGC 50183 |||||||| |||| Sbjct 5450 TGCTCTACCCCGC 5438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181599904809936