Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 4e-13 >seq4 Length=178899001 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| |||||||| || ||||| || |||||||| ||| |||| || | | Sbjct 81196087 ATGCAAATCTTTGTTAAGACCTTGACCGGTAAGACCATCACCTTGGAGGTCGAGAGCTCC 81196028 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || || | | | | |||||| ||| || ||||| || || | || || || Sbjct 81196027 GACACTATCGACAACGTGAAAGCAAAGATCCAGGACAAGGAGGGTATCCCACCGGACCAG 81195968 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || ||||| || | |||||| ||||| || ||||| | ||| | | ||||||||| Sbjct 81195967 CAGAGGCTCATCTTTGCGGGTAAACAGTTGGAAGACGGCAGGACTCTTGCGGATTACAAC 81195908 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || ||||| || || || || ||| | || |||||| | | ||||| Sbjct 81195907 ATCCAAAAGGAGTCGACTCTGCATCTGGTGTTGAGGCTGAGGGGAGG 81195861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402322107617024