Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq11 86.0 5e-12 >seq11 Length=168460249 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 111099 AATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAG 111158 |||||| || || ||||| || || || || || || || || ||||| ||| Sbjct 109472002 AATGCAGATATTCGTCAAGACCTTAACGGGGAAGACGATCACTCTGGAAGTGGAGAGTTC 109471943 Query 111159 CGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTC-GATC 111217 ||| |||||| | || || ||||||| |||||||| || | |||| | || | Sbjct 109471942 GGATACTGTTGATAATGTCAAGGCAAAAATTCAGGACAAAGAGGG-GATCCCACCTGACC 109471884 Query 111218 AACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATA 111277 | || || | || | |||||| ||||||||||| ||| | ||| | || ||||||| Sbjct 109471883 AGCAGCGGTTAATCTTTGCGGGTAAACAATTGGATGATGGTCGGACTCTTGCTGATTATA 109471824 Query 111278 ATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 | || || ||||| ||||| || || | || | ||||| |||||||| Sbjct 109471823 ACATTCAGAAAGAGTCTACCCTTCACCTTGTTCTTCGTCTCCGCGGTGG 109471775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421803344820928