Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Helianthus_20annuus_20[genbank_20GCA_5F002127325.1_202017-05-12] 1,528 sequences; 3,027,844,945 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq3 91.5 2e-13 seq13 86.0 8e-12 >seq3 Length=168485022 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771 ||||| |||||| |||||| |||| || ||||||||||| ||||||||||| ||| || Sbjct 91906489 TTATCGTGTCAAATGTATCAACGATCTGCCGATATGGGTTTGGGCGTTCCTTTTAACATA 91906430 Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 || || ||||| |||||||| | ||||||| || Sbjct 91906429 GCGTCATACGCCTTATTAACATGCATGATCGCCCA 91906395 >seq13 Length=197258317 Score = 86.0 bits (94), Expect = 8e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771 |||||||||||| |||||| |||| || ||||||||||| || |||||||| ||| || Sbjct 197094741 TTATCCTGTCAAATGTATCAACGATCTGCCGATATGGGTTTGGGTGTTCCTTTTAACATA 197094682 Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 || || ||||| ||||| || | ||||||| || Sbjct 197094681 GCATCATACGCCTTATTGACATGCATGATCGCGCA 197094647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667062458863680